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    97 repositories

    • NHLBI-BDC-DMC-HM

      Public
      BioData Catalyst Harmonized Model
      Python
      •
      MIT License
      •4•2•4•0•Updated Dec 23, 2024Dec 23, 2024

    • biocloud_docker_tools

      Public
      Docker library providing a catalog of images for RTI's cloud-based bioinformatics toolkit.
      C
      •11•5•15•1•Updated Dec 20, 2024Dec 20, 2024

    • teehr

      Public
      Tools for Exploratory Evaluation in Hydrologic Research
      Python
      •
      MIT License
      •11•8•32•1•Updated Dec 20, 2024Dec 20, 2024

    • NHLBI-BDC-DMC-DST

      Public
      My personal repository for work on the BioData Catalyst Dashboard
      Python
      •
      Apache License 2.0
      •3•4•15•0•Updated Dec 19, 2024Dec 19, 2024

    • mapMECFS-API

      Public
      Jupyter Notebook
      •
      MIT License
      •2•0•0•0•Updated Dec 17, 2024Dec 17, 2024

    • pymarrmot

      Public
      Python version of MARRMoT https://github.com/wknoben/MARRMoT
      Python
      •
      MIT License
      •0•0•4•0•Updated Dec 17, 2024Dec 17, 2024

    • ngiab-teehr

      Public
      A repository for coupling TEEHR with Nextgen-In-A-Box (NGIAB) simulation output
      Python
      •
      MIT License
      •3•1•3•0•Updated Dec 16, 2024Dec 16, 2024

    • teehr-hub

      Public
      HCL
      •
      MIT License
      •0•0•0•0•Updated Dec 6, 2024Dec 6, 2024

    • Test

      Public
      0•0•0•0•Updated Dec 4, 2024Dec 4, 2024

    • umrb-snodas

      Public
      Other
      •0•1•0•0•Updated Dec 2, 2024Dec 2, 2024

    • SMART

      Public
      Smarter Manual Annotation for Resource-constrained collection of Training data
      text-classificationsupervised-learningactive-learninglabeling-tool
      Python
      •
      MIT License
      •31•224•22•69•Updated Dec 2, 2024Dec 2, 2024

    • harness-vue-starter-template

      Public template
      JavaScript
      •
      MIT License
      •0•2•0•6•Updated Nov 28, 2024Nov 28, 2024

    • biocloud_wdl_tools

      Public
      WDL
      •2•0•2•0•Updated Nov 23, 2024Nov 23, 2024

    • biocloud_gwas_workflows

      Public
      WDL
      •2•3•8•0•Updated Nov 23, 2024Nov 23, 2024

    • harness-vue-bootstrap

      Public
      Vue
      •
      MIT License
      •0•3•0•8•Updated Nov 18, 2024Nov 18, 2024

    • harness-vue

      Public
      JavaScript
      •
      MIT License
      •1•10•1•9•Updated Nov 18, 2024Nov 18, 2024

    • conditional_api_trigger

      Public
      A REDCap external module for calling an API when a condition has been met.
      redcapredcap-external-moduleredcap-repo
      PHP
      •
      MIT License
      •0•0•0•0•Updated Nov 13, 2024Nov 13, 2024

    • ckanext-advancedauth

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Nov 6, 2024Nov 6, 2024

    • ckanext-searchterms

      Public
      Python
      •
      MIT License
      •0•0•0•1•Updated Oct 21, 2024Oct 21, 2024

    • ckanext-summarystats

      Public
      Python
      •
      MIT License
      •0•0•0•0•Updated Oct 21, 2024Oct 21, 2024

    • hefs-fews-hub

      Public
      A Docker file and collection of python scripts supporting the exploration of HEFS ensembles using FEWS within the TEEHRHub jupyterhub deployment.
      Python
      •
      MIT License
      •0•1•0•0•Updated Oct 18, 2024Oct 18, 2024

    • hab-inla

      Public
      Harmful Algal Bloom INLA model
      R
      •0•0•0•0•Updated Oct 11, 2024Oct 11, 2024

    • virtual-opioid-user

      Public
      Continuous model of an individual's opioid user over time
      Python
      •
      Other
      •1•1•1•0•Updated Oct 11, 2024Oct 11, 2024

    • withdrawal-remedy-explorer

      Public
      Explore the remedies for opioid withdrawal symptoms that people discuss on Reddit.
      Jupyter Notebook
      •
      Other
      •0•0•0•0•Updated Oct 11, 2024Oct 11, 2024

    • code_docker_lib

      Public archive
      Dockerized tools for the Center for Omics Discovery and Epidemiology
      Dockerfile
      •4•5•1•0•Updated Oct 2, 2024Oct 2, 2024

    • rti_synth_pop

      Public
      RTI has developed this code for creation of synthetic populations from the U.S. Census TIGER and American Community Survey (ACS) data with geospatial placement leveraging ORNL's LandScan USA data product. The resulting synthetic populations are suitable for geospatial analyses and modeling use cases including microsimulation.
      synthetic-data-synthetic-population-spatial-model
      Python
      •
      Other
      •0•0•0•0•Updated Sep 9, 2024Sep 9, 2024

    • crcsim

      Public
      Colorectal cancer (CRC) simulation model, designed to examine the impacts of screening strategies and patient compliance on outcomes like mortality rate.
      Python
      •
      Apache License 2.0
      •0•2•5•5•Updated Aug 29, 2024Aug 29, 2024

    • cervical-cancer-abm

      Public
      Cervical Cancer Prevention Agent-Based Model
      Python
      •
      Apache License 2.0
      •1•1•0•0•Updated Aug 23, 2024Aug 23, 2024

    • all_of_us_python_course

      Public
      Jupyter Notebook
      •
      MIT License
      •0•0•1•0•Updated Jul 12, 2024Jul 12, 2024

    • teehr-spark-iceberg

      Public
      A repository to hold code related to testing Spark and Iceberg for use in the TEEHR system.
      Jupyter Notebook
      •0•0•0•0•Updated Jun 14, 2024Jun 14, 2024