Repositories list

• ATACseeker

  Public
  ATACseq tools for Bioconductor

  atac-seqbioconductor

  R

  •7•7•0•0•Updated Apr 14, 2018Apr 14, 2018

• atacseeker_app

  Public
  Illumina BaseSpace ATACseq pipeline.

  dockergenomicsatac-seq+ 1basespace

  HTML

  •0•3•6•0•Updated Oct 24, 2017Oct 24, 2017

• arkas

  Public
  This is the kallisto package

  R

  •0•0•1•1•Updated May 25, 2017May 25, 2017

• Arkas-RNASeq

  Public
  Source Code related to Arkas BaseSpace on Illumina BaseSpace

  HTML

  •0•0•0•0•Updated Apr 11, 2017Apr 11, 2017

• arkasData

  Public
  staging area for building arkasData

  R

  •0•0•1•0•Updated Aug 25, 2016Aug 25, 2016

• TxDbLite

  Public
  This is TxDbLite with respect arkas arcolombo branch (staging area)

  R

  •0•0•2•0•Updated Aug 21, 2016Aug 21, 2016

• WGBS

  Public
  Packages for the WGBS Pipeline, localized and basespace nativeApp

  Shell

  •2•2•0•0•Updated Jan 21, 2016Jan 21, 2016

• ozymandias

  Public
  Look on my works, ye Mighty, and despair... just kidding, it's a slightly better meth lab

  R

  •

  Other

  •1•2•0•0•Updated Nov 5, 2015Nov 5, 2015

• USC-BedGraph-Converter-License

  Public
  This repo holds the end user license agreement for Illumina's Basespace platform that hosts USC BedGraph Converter

  1•0•0•0•Updated Jul 29, 2015Jul 29, 2015

• EnrichmentBrowser

  Public
  This is a read-only mirror of the Bioconductor SVN repository. Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=EnrichmentBrowser. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/EnrichmentBrowser

  R

  •0•0•0•0•Updated Jul 15, 2015Jul 15, 2015

• SummarizedExperiment

  Public
  This is a read-only mirror of the Bioconductor SVN repository. Bug Reports: https://support.bioconductor.org/p/new/post/?tag_val=SummarizedExperiment. Package Homepage: http://bioconductor.org/packages/devel/bioc/html/SummarizedExperiment

  R

  •5•0•0•0•Updated Jun 30, 2015Jun 30, 2015

• curriculum

  Public
  Recommended background for new lab members.

  1•2•0•0•Updated Jun 8, 2015Jun 8, 2015