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    26 repositories

    • sclerotinia-review-2017

      Public
      Code for simulations and manuscript
      TeX
      •
      MIT License
      •1•0•0•0•Updated Aug 23, 2022Aug 23, 2022

    • WMNCSRP_fungicide_sensitivity_invitro

      Public
      Repository for a case study of reproducible research in plant pathology
      Creative Commons Zero v1.0 Universal
      •0•1•0•0•Updated Jun 9, 2022Jun 9, 2022

    • Demultiplexing-sequencing-by-HaplotypR-through-Docker

      Public
      This is an example of demultiplexing
      0•0•0•0•Updated Jun 14, 2021Jun 14, 2021

    • labwebsite

      Public
      HTML
      •0•0•0•0•Updated Mar 10, 2021Mar 10, 2021

    • brazil-sclerotinia-2017

      Public
      An analysis of *Sclerotinia sclerotiorum* from Brazil
      R
      •
      MIT License
      •0•0•2•0•Updated Sep 25, 2020Sep 25, 2020

    • SclerotiniaAmaradasaPLOSdata

      Public
      R
      •
      MIT License
      •0•0•0•0•Updated Sep 25, 2020Sep 25, 2020

    • Itai

      Public
      Data analysis of the Itai site to create Figure 1 for class project
      R
      •1•0•0•0•Updated Apr 9, 2020Apr 9, 2020

    • APS_IntroR_2020

      Public
      Introduction to R
      R
      •
      Creative Commons Attribution Share Alike 4.0 International
      •3•3•0•0•Updated Feb 27, 2020Feb 27, 2020

    • APS_IntroR_2019

      Public
      Introduction to R
      R
      •
      Creative Commons Attribution Share Alike 4.0 International
      •3•1•0•0•Updated Jul 16, 2019Jul 16, 2019

    • selection_WM_isolates_forfungicidetrials

      Public
      Selecting WM isolates for fungicide sensitivity trials
      HTML
      •0•0•0•0•Updated May 20, 2019May 20, 2019

    • IntroR_2019

      Public
      Introduction to R, 2019
      R
      •
      Creative Commons Attribution Share Alike 4.0 International
      •1•0•1•0•Updated Mar 17, 2019Mar 17, 2019

    • PlantPathCurriculum

      Public
      Analysis of curriculum survey completed in January 2019
      0•0•0•0•Updated Jan 28, 2019Jan 28, 2019

    • SscPhenoProj

      Public
      Project characterizing Ssc phenotypes and cultivar performance
      R
      •
      MIT License
      •1•1•1•0•Updated Dec 20, 2018Dec 20, 2018

    • IntroR-at-PennState

      Public
      Revised IntroR page for workshop at PennState on October 17, 2018
      workshopplant-pathologistsintror
      R
      •
      Creative Commons Attribution Share Alike 4.0 International
      •0•2•0•0•Updated Oct 12, 2018Oct 12, 2018

    • IntroR_Workshop

      Public
      Introduction to R at UNL, 2018
      R
      •
      Creative Commons Attribution Share Alike 4.0 International
      •0•0•1•0•Updated Jul 17, 2018Jul 17, 2018

    • sclerotinia-366

      Public
      Analysis for "Population structure and phenotypic variation of *Sclerotinia sclerotiorum* from dry bean (*Phaseolus vulgaris*) in the United States"
      rreproducible-researchrmarkdownreproducible-scienceplant-pathologyfungalreproducible-papersclerotiniaresearch-compendiumdocker-container
      Shell
      •
      Other
      •6•11•1•0•Updated Apr 12, 2018Apr 12, 2018

    • sclerotinia-366-dependencies

      Public
      A dockerfile to set up all the software dependencies necessary to run Kamvar et al. 2017
      MIT License
      •1•0•0•0•Updated Apr 9, 2018Apr 9, 2018

    • icpp-2018-reproducibility-poster

      Public
      Repository for "The open road: A case study of reproducible research in plant pathology"
      Creative Commons Attribution 4.0 International
      •0•3•0•0•Updated Apr 5, 2018Apr 5, 2018

    • IntroR-for-PLPT802

      Public
      Intro R for PLPT802: Ecology & Management of Plant Pathogens
      HTML
      •
      Creative Commons Attribution Share Alike 4.0 International
      •1•1•0•1•Updated Apr 3, 2018Apr 3, 2018

    • culturing

      Public
      Protocol for culturing Phytophthoras
      TeX
      •0•0•0•0•Updated Feb 27, 2018Feb 27, 2018

    • read-processing

      Public
      A makefile and scripts for processing *S. sclerotiorum* illumina data
      Shell
      •
      MIT License
      •1•0•4•0•Updated Oct 18, 2017Oct 18, 2017

    • IntroR-at-OSU

      Public
      Ohio State Intro R
      R
      •
      Creative Commons Attribution Share Alike 4.0 International
      •2•2•0•0•Updated Oct 18, 2017Oct 18, 2017

    • labprotocols

      Public
      Protocols used in the Everhart Lab
      0•0•1•0•Updated Oct 14, 2017Oct 14, 2017

    • IntroR

      Public
      An introduction to R for plant pathologists
      R
      •
      Creative Commons Attribution Share Alike 4.0 International
      •5•3•1•0•Updated Oct 9, 2017Oct 9, 2017

    • IntroRNCAPS

      Public
      Introduction to R for the North Central American Phytopathological Meeting
      R
      •
      Creative Commons Attribution Share Alike 4.0 International
      •0•1•0•0•Updated Jun 14, 2017Jun 14, 2017

    • WAMSproposal

      Public
      R
      •
      GNU General Public License v3.0
      •0•0•0•0•Updated May 31, 2017May 31, 2017