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@mi-erasmusmc Department of Medical Informatics, Erasmus MC

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    107 repositories

    • Strategus

      Public
      [Under development] An R packages for coordinating and executing analytics using HADES modules
      R
      •11•0•0•0•Updated Oct 3, 2024Oct 3, 2024

    • Explore

      Public
      Finding a short and accurate decision rule in disjunctive normal form by exhaustive search
      C++
      •1•1•10•2•Updated Oct 2, 2024Oct 2, 2024

    • PatientLevelPrediction

      Public
      An R package for performing patient level prediction.
      HTML
      •88•4•0•1•Updated Oct 2, 2024Oct 2, 2024

    • CohortDiagnostics

      Public
      An R package for performing various cohort diagnostics.
      R
      •48•0•0•0•Updated Sep 19, 2024Sep 19, 2024

    • ets-rosetta-stone-ui

      Public
      Simple web interface for the eTransafe Rosetta Stone
      TypeScript
      •
      Apache License 2.0
      •0•0•0•0•Updated Sep 17, 2024Sep 17, 2024

    • JCdmBuilder

      Public
      JCdmBuilder is a Java program that can be used to transform observational datasets from their native formats and schemas into the OMOP Common Data Model.
      R
      •8•0•2•0•Updated Sep 16, 2024Sep 16, 2024

    • omop-poincare

      Public
      Training of hyperbolic embeddings leveraging the OMOP vocabulary hierarchies.
      Jupyter Notebook
      •0•0•0•1•Updated Sep 13, 2024Sep 13, 2024

    • comap

      Public
      The ADVANCE CodeMapper tool
      Jupyter Notebook
      •
      GNU Affero General Public License v3.0
      •0•3•0•5•Updated Sep 4, 2024Sep 4, 2024

    • DelphiDepot

      Public
      A repository containing the prediction models in the DELPHI library
      1•0•0•0•Updated Jul 23, 2024Jul 23, 2024

    • aioli

      Public
      Java
      •
      Apache License 2.0
      •1•0•0•0•Updated Jul 18, 2024Jul 18, 2024

    • ets-rosetta-stone

      Public
      eTransafe Rosetta Stone is a terminology translation tool
      Java
      •
      Apache License 2.0
      •1•0•0•0•Updated Jul 2, 2024Jul 2, 2024

    • medspacy_dutch

      Public
      Dutch resources for extracting concepts and their context using medspacy
      Jupyter Notebook
      •
      MIT License
      •0•0•0•0•Updated May 30, 2024May 30, 2024

    • Snippet

      Public
      Collection of code snippets to execute patient-level prediction studies.
      R
      •
      Apache License 2.0
      •0•0•0•0•Updated May 24, 2024May 24, 2024

    • RareTransferLearning

      Public
      0•0•0•0•Updated May 7, 2024May 7, 2024

    • CohortGeneratorModule

      Public
      [Under development] A module wrapper around the CohortGenerator package
      R
      •8•0•0•0•Updated May 1, 2024May 1, 2024

    • PatientLevelPredictionModule

      Public
      [Under development] A module wrapper around the PatientLevelPrediction package
      R
      •4•0•0•0•Updated May 1, 2024May 1, 2024

    • AssociationRuleMining

      Public
      An R package that implements association rule mining and frequent pattern mining against the OMOP-CDM
      R
      •1•2•2•0•Updated Mar 18, 2024Mar 18, 2024

    • DutchClinicalCorpora

      Public
      MIT License
      •0•1•0•0•Updated Mar 14, 2024Mar 14, 2024

    • TreatmentPatternsOfChronicCough

      Public
      R
      •
      Apache License 2.0
      •0•0•1•0•Updated Mar 7, 2024Mar 7, 2024

    • AsthmaCOPDTreatmentPatterns

      Public
      A package to analyse real-world treatment patterns for patients with asthma, COPD and Asthma-COPD Overlap.
      R
      •0•1•0•0•Updated Feb 22, 2024Feb 22, 2024

    • PredictiveValueFPs

      Public
      A study package for evaluating the predictive value of frequent patterns.
      R
      •
      Other
      •0•0•0•0•Updated Feb 2, 2024Feb 2, 2024

    • faersdbstats

      Public
      Generate safety signal statistics from FDA FAERS data
      Shell
      •
      Apache License 2.0
      •29•0•0•0•Updated Jan 13, 2024Jan 13, 2024

    • MedlineDailyUpdateDownload

      Public
      App to incrementally download update files from medline ftp server
      Java
      •0•0•0•0•Updated Jan 5, 2024Jan 5, 2024

    • MedlineXmlToDatabase

      Public
      Java
      •
      Apache License 2.0
      •0•0•0•0•Updated Dec 21, 2023Dec 21, 2023

    • EU-ADR-Corpus

      Public
      EU-ADR Corpus
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 7, 2023Dec 7, 2023

    • Dutch-Clinical-Corpus

      Public
      Dutch Clinical Corpus
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 7, 2023Dec 7, 2023

    • Annotated-Chemical-Patent-Corpus

      Public
      Annotated Chemical Patent Corpus
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 7, 2023Dec 7, 2023

    • Mantra-Gold-Standard-Corpus

      Public
      Mantra Gold Standard Corpus
      GNU General Public License v3.0
      •0•0•0•0•Updated Dec 7, 2023Dec 7, 2023

    • DementiaPredictionModel

      Public
      0•0•0•0•Updated Oct 26, 2023Oct 26, 2023

    • StackingEnsemblePrediction

      Public
      HTML
      •0•0•0•0•Updated Sep 4, 2023Sep 4, 2023