Skip to content

@warwickcamdu CAMDU

Change the repository type filter

All

    Repositories list

    32 repositories

    • python_napari_training

      Public
      Training materials for python/napari workshops
      Jupyter Notebook
      •
      MIT License
      •0•1•1•0•Updated Dec 2, 2024Dec 2, 2024

    • PetaKit5DfromSLD

      Public
      MATLAB
      •
      Other
      •7•0•7•0•Updated Nov 5, 2024Nov 5, 2024

    • FRAPanalysis

      Public
      MATLAB
      •
      MIT License
      •0•0•0•0•Updated Oct 29, 2024Oct 29, 2024

    • SpotsInCells

      Public
      Finding cell outlines, counting number of spots in each, saving to OMERO
      ImageJ Macro
      •
      MIT License
      •1•0•1•0•Updated Apr 23, 2024Apr 23, 2024

    • KinetochoreCount

      Public
      Find and count kinetochores in embryos
      ImageJ Macro
      •
      MIT License
      •1•0•1•0•Updated Apr 11, 2024Apr 11, 2024

    • BacteriaArea

      Public
      ImageJ Macro
      •
      MIT License
      •1•0•0•0•Updated Apr 4, 2024Apr 4, 2024

    • RA_Fish

      Public
      ImageJ Macro
      •
      MIT License
      •1•0•0•0•Updated Mar 21, 2024Mar 21, 2024

    • StructuralTensorForAnisotropy

      Public
      MIT License
      •1•0•0•0•Updated Feb 27, 2024Feb 27, 2024

    • NucleiOrientation

      Public
      ImageJ Macro
      •
      MIT License
      •1•0•0•0•Updated Feb 19, 2024Feb 19, 2024

    • CountingFociInsideNuclei

      Public
      ImageJ Macro
      •1•0•0•0•Updated Jan 16, 2024Jan 16, 2024

    • 40WellIntensityRecorder

      Public
      ImageJ Macro
      •1•0•0•0•Updated Jan 16, 2024Jan 16, 2024

    • StackAndBlind

      Public
      ImageJ Macro
      •1•0•0•0•Updated Jan 16, 2024Jan 16, 2024

    • BinnedProfileIntensityOverTime

      Public
      MATLAB
      •1•0•0•0•Updated Jan 16, 2024Jan 16, 2024

    • NucleiCounting

      Public
      ImageJ Macro
      •0•0•0•0•Updated Jan 16, 2024Jan 16, 2024

    • ROIIntensityTimeCourse

      Public
      ImageJ Macro
      •0•0•0•0•Updated Jan 16, 2024Jan 16, 2024

    • ZoomAttendenceMetrics

      Public
      Collate information from Teams attendence reports
      Python
      •
      MIT License
      •1•0•0•0•Updated Dec 13, 2023Dec 13, 2023

    • MinimalOmeropy

      Public
      Jupyter Notebook
      •1•0•0•0•Updated Nov 14, 2023Nov 14, 2023

    • CorrAndCov

      Public
      Python
      •
      GNU General Public License v2.0
      •1•0•0•0•Updated Nov 14, 2023Nov 14, 2023

    • warwickcamdu.github.io

      Public
      Github pages repo
      HTML
      •
      MIT License
      •4•0•0•0•Updated Oct 30, 2023Oct 30, 2023

    • OMEROimport

      Public
      Commands used to set up automatic imports to OMERO from microscopes
      omero-import
      Shell
      •
      MIT License
      •1•3•0•0•Updated Mar 11, 2022Mar 11, 2022

    • Matlab-app-for-collective-migration-plots-

      Public
      This repository contains files to mount or edit the design and scripts for a matlab app which provides various plots related to collective migration, based on .csv tracks outputted by imaris.
      MATLAB
      •2•0•0•0•Updated Aug 4, 2021Aug 4, 2021

    • BatchMacro

      Public
      Scripts for running a macro on a dataset from OMERO
      ImageJ Macro
      •
      MIT License
      •1•0•0•0•Updated Jun 21, 2021Jun 21, 2021

    • MinimalOMEROImageJ

      Public
      Jupyter Notebook
      •
      MIT License
      •2•0•0•0•Updated May 13, 2021May 13, 2021

    • LLSM

      Public
      This programme is to be used for the processing of raw lattice light sheet data, and has two main features (1) deskewing and creating maximum projections of raw lattice light sheet data and (2) performing microtubule track analysis using U-track (Danuser Lab).
      MATLAB
      •
      GNU General Public License v3.0
      •1•0•0•0•Updated Apr 23, 2021Apr 23, 2021

    • auto_qc

      Public
      Java
      •
      Other
      •5•1•0•0•Updated Feb 17, 2021Feb 17, 2021

    • MinimalOmeroMatlab

      Public
      Minimal example of using OMERO with Matlab
      MATLAB
      •1•0•0•0•Updated Feb 1, 2021Feb 1, 2021

    • WellIntensities

      Public
      ImageJ Macro for measuring the fluoresence intensity of wells in a well plate
      MIT License
      •1•0•0•0•Updated Nov 25, 2020Nov 25, 2020

    • tammes_vesicles

      Public
      Calculating the theoretical maximum number of proteins on the surface of vesicles.
      C
      •
      MIT License
      •1•0•0•0•Updated Aug 20, 2019Aug 20, 2019

    • CostedBookings

      Public
      Python
      •
      Other
      •1•0•0•0•Updated Aug 20, 2019Aug 20, 2019

    • autoQC_extras

      Public
      Extra utilities (e.g. plotting) for data generated by autoQC.
      Python
      •
      Other
      •1•0•0•0•Updated Jul 22, 2019Jul 22, 2019