From 519c19f0ff419042cbd59f551f4233436cad2017 Mon Sep 17 00:00:00 2001 From: Aaruni Kaushik Date: Wed, 13 Mar 2024 15:30:13 +0100 Subject: [PATCH 01/11] Update CI.yml --- .github/workflows/CI.yml | 8 +++++++- 1 file changed, 7 insertions(+), 1 deletion(-) diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml index 04ee303..bdbcebf 100644 --- a/.github/workflows/CI.yml +++ b/.github/workflows/CI.yml @@ -48,4 +48,10 @@ jobs: Pkg.add("Plots")' - run: mkdir -pv notebooks - run: python3 tester.py ${{ matrix.node }} - continue-on-error: true \ No newline at end of file + continue-on-error: true + - name: Upload new notebook + uses: actions/upload-artifact@v4 + with: + name: my-artifact + path: notebooks/*.ipynb + retention-days: 7 From 93a01be1bb631bd6665cbb066562aec28a2f0674 Mon Sep 17 00:00:00 2001 From: Aaruni Kaushik Date: Wed, 13 Mar 2024 15:49:47 +0100 Subject: [PATCH 02/11] Update CI.yml --- .github/workflows/CI.yml | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml index bdbcebf..8d31179 100644 --- a/.github/workflows/CI.yml +++ b/.github/workflows/CI.yml @@ -49,9 +49,9 @@ jobs: - run: mkdir -pv notebooks - run: python3 tester.py ${{ matrix.node }} continue-on-error: true - - name: Upload new notebook - uses: actions/upload-artifact@v4 - with: - name: my-artifact - path: notebooks/*.ipynb - retention-days: 7 + #- name: Upload new notebook + # uses: actions/upload-artifact@v4 + # with: + # name: my-artifact + # path: notebooks/*.ipynb + # retention-days: 7 From af53106221919b9e82b4248ff9462c9c994ddf2a Mon Sep 17 00:00:00 2001 From: Aaruni Kaushik Date: Thu, 14 Mar 2024 11:13:06 +0100 Subject: [PATCH 03/11] Update CI.yml --- .github/workflows/CI.yml | 12 ++++++------ 1 file changed, 6 insertions(+), 6 deletions(-) diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml index 8d31179..e37123d 100644 --- a/.github/workflows/CI.yml +++ b/.github/workflows/CI.yml @@ -49,9 +49,9 @@ jobs: - run: mkdir -pv notebooks - run: python3 tester.py ${{ matrix.node }} continue-on-error: true - #- name: Upload new notebook - # uses: actions/upload-artifact@v4 - # with: - # name: my-artifact - # path: notebooks/*.ipynb - # retention-days: 7 + - name: Upload new notebook + uses: actions/upload-artifact@v4 + with: + name: ${{ matrix.node }} + path: notebooks/*.ipynb + retention-days: 7 From af6a8fcf8fad96d80f59511f58431efe46e626d6 Mon Sep 17 00:00:00 2001 From: Aaruni Kaushik Date: Thu, 14 Mar 2024 11:43:53 +0100 Subject: [PATCH 04/11] Update scripts to try to fix naming matrix --- getter.py | 3 ++- tester.py | 5 ++--- 2 files changed, 4 insertions(+), 4 deletions(-) diff --git a/getter.py b/getter.py index 271ddd8..2b3858a 100644 --- a/getter.py +++ b/getter.py @@ -11,7 +11,8 @@ outstring="" for tut in yamlcontent: - outstring += f"""'{tut["repository"]} {tut["filename"]}', """ + splstring = tut["repository"].split('/') + outstring += f"""'{splstring[0]} {splstring[1]} {tut["filename"]}', """ outstring = outstring[0:-2] diff --git a/tester.py b/tester.py index 5b0007d..d5321e8 100644 --- a/tester.py +++ b/tester.py @@ -4,9 +4,8 @@ print(sys.argv) -repo = sys.argv[1] -filename = sys.argv[2] -print(f"Grabbing {repo}/{filename}...") +repo = f"{sys.argv[1]}/{sys.argv[2]}" +filename = sys.argv[3] tut = f'''https://raw.githubusercontent.com/{repo}/master/{filename}.ipynb''' nbfilename = f"notebooks/{filename}.ipynb" with open(nbfilename, 'w') as tutfile: From 87676042f3883f0aef444e32b6d66adc053a93a3 Mon Sep 17 00:00:00 2001 From: Aaruni Kaushik Date: Thu, 14 Mar 2024 11:45:01 +0100 Subject: [PATCH 05/11] Update to checkouts v4 to avoid stupid warning --- .github/workflows/CI.yml | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml index e37123d..90f637b 100644 --- a/.github/workflows/CI.yml +++ b/.github/workflows/CI.yml @@ -16,7 +16,7 @@ jobs: outputs: matrix: ${{ steps.set-matrix.outputs.matrix }} steps: - - uses: actions/checkout@v3 + - uses: actions/checkout@v4 - id: set-matrix run: | echo "::set-output name=matrix::{\"node\":[$(python getter.py)]}" @@ -28,7 +28,7 @@ jobs: strategy: matrix: ${{fromJSON(needs.job1.outputs.matrix)}} steps: - - uses: actions/checkout@v3 + - uses: actions/checkout@v4 - name: "Set up Julia" uses: julia-actions/setup-julia@v1 with: From cd4f26e954e4735ea0fd00db944ea82897cccce5 Mon Sep 17 00:00:00 2001 From: Aaruni Kaushik Date: Mon, 18 Mar 2024 10:44:29 +0100 Subject: [PATCH 06/11] Force Oscar 1.0 --- .github/workflows/CI.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml index 90f637b..1c38b40 100644 --- a/.github/workflows/CI.yml +++ b/.github/workflows/CI.yml @@ -40,7 +40,7 @@ jobs: julia -e ' using Pkg Pkg.add("IJulia") - Pkg.add("Oscar") + Pkg.add(name="Oscar", version="1.0.0") Pkg.add("BenchmarkTools") Pkg.add("GraphRecipes") Pkg.add("Graphs") From cdf9d6bb0a070ae30080b54b1893be22606ce78e Mon Sep 17 00:00:00 2001 From: Aaruni Kaushik Date: Mon, 18 Mar 2024 12:45:43 +0100 Subject: [PATCH 07/11] Try something brave --- .github/workflows/CI.yml | 1 + getter.py | 1 + 2 files changed, 2 insertions(+) diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml index 1c38b40..fab60b5 100644 --- a/.github/workflows/CI.yml +++ b/.github/workflows/CI.yml @@ -47,6 +47,7 @@ jobs: Pkg.add("Interact") Pkg.add("Plots")' - run: mkdir -pv notebooks + - run: cat ~/.local/share/jupyter/kernels/julia-1.10/kernel.json - run: python3 tester.py ${{ matrix.node }} continue-on-error: true - name: Upload new notebook diff --git a/getter.py b/getter.py index 2b3858a..9b31806 100644 --- a/getter.py +++ b/getter.py @@ -13,6 +13,7 @@ for tut in yamlcontent: splstring = tut["repository"].split('/') outstring += f"""'{splstring[0]} {splstring[1]} {tut["filename"]}', """ + break outstring = outstring[0:-2] From 435b8d978b13f3a9a9ea5bdad2acde4f544e178f Mon Sep 17 00:00:00 2001 From: Aaruni Kaushik Date: Mon, 18 Mar 2024 13:04:58 +0100 Subject: [PATCH 08/11] Use default julia environmnet --- .github/workflows/CI.yml | 5 ++++- getter.py | 1 - 2 files changed, 4 insertions(+), 2 deletions(-) diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml index fab60b5..543067c 100644 --- a/.github/workflows/CI.yml +++ b/.github/workflows/CI.yml @@ -47,7 +47,10 @@ jobs: Pkg.add("Interact") Pkg.add("Plots")' - run: mkdir -pv notebooks - - run: cat ~/.local/share/jupyter/kernels/julia-1.10/kernel.json + - name: Use default julia environment + run: | + cat ~/.local/share/jupyter/kernels/julia-1.10/kernel.json | sed 's/^.*project=.*$//' > ~/.local/share/jupyter/kernels/julia-1.10/kernel.json.new + mv -v ~/.local/share/jupyter/kernels/julia-1.10/kernel.json.new ~/.local/share/jupyter/kernels/julia-1.10/kernel.json - run: python3 tester.py ${{ matrix.node }} continue-on-error: true - name: Upload new notebook diff --git a/getter.py b/getter.py index 9b31806..2b3858a 100644 --- a/getter.py +++ b/getter.py @@ -13,7 +13,6 @@ for tut in yamlcontent: splstring = tut["repository"].split('/') outstring += f"""'{splstring[0]} {splstring[1]} {tut["filename"]}', """ - break outstring = outstring[0:-2] From c7f3b6bda1cd2d95dcaa84dcec9f9c30bb597b56 Mon Sep 17 00:00:00 2001 From: Aaruni Kaushik Date: Mon, 18 Mar 2024 13:22:18 +0100 Subject: [PATCH 09/11] Get rid of continue-on-error --- .github/workflows/CI.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml index 543067c..e1c9307 100644 --- a/.github/workflows/CI.yml +++ b/.github/workflows/CI.yml @@ -26,6 +26,7 @@ jobs: name: "Run tests" runs-on: ubuntu-latest strategy: + fail-fast: false matrix: ${{fromJSON(needs.job1.outputs.matrix)}} steps: - uses: actions/checkout@v4 @@ -52,7 +53,6 @@ jobs: cat ~/.local/share/jupyter/kernels/julia-1.10/kernel.json | sed 's/^.*project=.*$//' > ~/.local/share/jupyter/kernels/julia-1.10/kernel.json.new mv -v ~/.local/share/jupyter/kernels/julia-1.10/kernel.json.new ~/.local/share/jupyter/kernels/julia-1.10/kernel.json - run: python3 tester.py ${{ matrix.node }} - continue-on-error: true - name: Upload new notebook uses: actions/upload-artifact@v4 with: From b03b6ce54b32f47888bc8b18c077464ac4423433 Mon Sep 17 00:00:00 2001 From: Aaruni Kaushik Date: Mon, 18 Mar 2024 14:49:11 +0100 Subject: [PATCH 10/11] Get rid of julia tomlfiles. --- Manifest.toml | 1892 ------------------------------------------------- Project.toml | 8 - 2 files changed, 1900 deletions(-) delete mode 100644 Manifest.toml delete mode 100644 Project.toml diff --git a/Manifest.toml b/Manifest.toml deleted file mode 100644 index ea2b3e3..0000000 --- a/Manifest.toml +++ /dev/null @@ -1,1892 +0,0 @@ -# This file is machine-generated - editing it directly is not advised - -julia_version = "1.10.0" -manifest_format = "2.0" -project_hash = "118b53c4d41c32c42c365b61268476599e19f332" - -[[deps.ASL_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "6252039f98492252f9e47c312c8ffda0e3b9e78d" -uuid = "ae81ac8f-d209-56e5-92de-9978fef736f9" -version = "0.1.3+0" - -[[deps.AbstractAlgebra]] -deps = ["GroupsCore", "InteractiveUtils", "LinearAlgebra", "MacroTools", "Preferences", "Random", "RandomExtensions", "SparseArrays", "Test"] -git-tree-sha1 = "f548e31d85b4f98ee3ce6d905338bc7221fd3395" -uuid = "c3fe647b-3220-5bb0-a1ea-a7954cac585d" -version = "0.35.3" - -[[deps.AbstractTrees]] -git-tree-sha1 = "faa260e4cb5aba097a73fab382dd4b5819d8ec8c" -uuid = "1520ce14-60c1-5f80-bbc7-55ef81b5835c" -version = "0.4.4" - -[[deps.Adapt]] -deps = ["LinearAlgebra", "Requires"] -git-tree-sha1 = "0fb305e0253fd4e833d486914367a2ee2c2e78d0" -uuid = "79e6a3ab-5dfb-504d-930d-738a2a938a0e" -version = "4.0.1" -weakdeps = ["StaticArrays"] - 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-[[deps.libinput_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "eudev_jll", "libevdev_jll", "mtdev_jll"] -git-tree-sha1 = "ad50e5b90f222cfe78aa3d5183a20a12de1322ce" -uuid = "36db933b-70db-51c0-b978-0f229ee0e533" -version = "1.18.0+0" - -[[deps.libpng_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Zlib_jll"] -git-tree-sha1 = "93284c28274d9e75218a416c65ec49d0e0fcdf3d" -uuid = "b53b4c65-9356-5827-b1ea-8c7a1a84506f" -version = "1.6.40+0" - -[[deps.libpolymake_julia_jll]] -deps = ["Artifacts", "CompilerSupportLibraries_jll", "FLINT_jll", "JLLWrappers", "Libdl", "TOPCOM_jll", "lib4ti2_jll", "libcxxwrap_julia_jll", "polymake_jll"] -git-tree-sha1 = "4b85b4350df4bfc429bf3b81a3c1d709c18eaaea" -uuid = "4d8266f6-2b3b-57e3-ad7a-d431eaaac945" -version = "0.11.2+0" - -[[deps.libsingular_julia_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Singular_jll", "libcxxwrap_julia_jll"] -git-tree-sha1 = "bcf29726c1c4cd53c0e3c6c093cdca68d0f67beb" -uuid = "ae4fbd8f-ecdb-54f8-bbce-35570499b30e" -version = "0.40.11+0" - -[[deps.libsodium_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "848ab3d00fe39d6fbc2a8641048f8f272af1c51e" -uuid = "a9144af2-ca23-56d9-984f-0d03f7b5ccf8" -version = "1.0.20+0" - -[[deps.libvorbis_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Ogg_jll", "Pkg"] -git-tree-sha1 = "b910cb81ef3fe6e78bf6acee440bda86fd6ae00c" -uuid = "f27f6e37-5d2b-51aa-960f-b287f2bc3b7a" -version = "1.3.7+1" - -[[deps.lrslib_jll]] -deps = ["Artifacts", "GMP_jll", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "9169c4d5823195a7a2173fc6b479468478857438" -uuid = "3873f7d0-7b7c-52c3-bdf4-8ab39b8f337a" -version = "0.3.3+0" - -[[deps.msolve_jll]] -deps = ["Artifacts", "CompilerSupportLibraries_jll", "FLINT_jll", "GMP_jll", "JLLWrappers", "LLVMOpenMP_jll", "Libdl", "MPFR_jll"] -git-tree-sha1 = "6d02a110f583341deea0d249b1a741352631aed6" -uuid = "6d01cc9a-e8f6-580e-8c54-544227e08205" -version = "0.6.3+0" - -[[deps.mtdev_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "814e154bdb7be91d78b6802843f76b6ece642f11" -uuid = "009596ad-96f7-51b1-9f1b-5ce2d5e8a71e" -version = "1.1.6+0" - -[[deps.nauty_jll]] -deps = ["Artifacts", "GMP_jll", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "fc7dc197df0648cd5f965801bfe086abd9325add" -uuid = "55c6dc9b-343a-50ca-8ff2-b71adb3733d5" -version = "2.6.13+1" - -[[deps.nghttp2_jll]] -deps = ["Artifacts", "Libdl"] -uuid = "8e850ede-7688-5339-a07c-302acd2aaf8d" -version = "1.52.0+1" - -[[deps.normaliz_jll]] -deps = ["Artifacts", "CompilerSupportLibraries_jll", "FLINT_jll", "GMP_jll", "JLLWrappers", "LLVMOpenMP_jll", "Libdl", "MPFR_jll", "Pkg", "nauty_jll"] -git-tree-sha1 = "30bc19e1b68db7625eeeb375b7f5602337caa314" -uuid = "6690c6e9-4e12-53b8-b8fd-4bffaef8839f" -version = "300.900.301+0" - -[[deps.p7zip_jll]] -deps = ["Artifacts", "Libdl"] -uuid = "3f19e933-33d8-53b3-aaab-bd5110c3b7a0" -version = "17.4.0+2" - -[[deps.polymake_jll]] -deps = ["Artifacts", "CompilerSupportLibraries_jll", "FLINT_jll", "GMP_jll", "JLLWrappers", "LLVMOpenMP_jll", "Libdl", "MPFR_jll", "MongoC_jll", "PPL_jll", "Perl_jll", "SCIP_jll", "bliss_jll", "boost_jll", "cddlib_jll", "lrslib_jll", "normaliz_jll"] -git-tree-sha1 = "f77c91a5c44d0f54d491bc32bdcb31574d188818" -uuid = "7c209550-9012-526c-9264-55ba7a78ba2c" -version = "400.1100.1+0" - -[[deps.polymake_oscarnumber_jll]] -deps = ["Artifacts", "CompilerSupportLibraries_jll", "JLLWrappers", "LLVMOpenMP_jll", "Libdl", "libcxxwrap_julia_jll", "libpolymake_julia_jll", "polymake_jll"] -git-tree-sha1 = "9a07dbfdf3ecc7598ac7e240360f9bd3d82364d8" -uuid = "10f31823-b687-53e6-9f29-edb9d4da9f9f" -version = "0.2.9+0" - -[[deps.snappy_jll]] -deps = ["Artifacts", "JLLWrappers", "LZO_jll", "Libdl", "Pkg", "Zlib_jll"] -git-tree-sha1 = "985c1da710b0e43f7c52f037441021dfd0e3be14" -uuid = "fe1e1685-f7be-5f59-ac9f-4ca204017dfd" -version = "1.1.9+1" - -[[deps.x264_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "4fea590b89e6ec504593146bf8b988b2c00922b2" -uuid = "1270edf5-f2f9-52d2-97e9-ab00b5d0237a" -version = "2021.5.5+0" - -[[deps.x265_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg"] -git-tree-sha1 = "ee567a171cce03570d77ad3a43e90218e38937a9" -uuid = "dfaa095f-4041-5dcd-9319-2fabd8486b76" -version = "3.5.0+0" - -[[deps.xkbcommon_jll]] -deps = ["Artifacts", "JLLWrappers", "Libdl", "Pkg", "Wayland_jll", "Wayland_protocols_jll", "Xorg_libxcb_jll", "Xorg_xkeyboard_config_jll"] -git-tree-sha1 = "9c304562909ab2bab0262639bd4f444d7bc2be37" -uuid = "d8fb68d0-12a3-5cfd-a85a-d49703b185fd" -version = "1.4.1+1" diff --git a/Project.toml b/Project.toml deleted file mode 100644 index d17219c..0000000 --- a/Project.toml +++ /dev/null @@ -1,8 +0,0 @@ -[deps] -BenchmarkTools = "6e4b80f9-dd63-53aa-95a3-0cdb28fa8baf" -GraphRecipes = "bd48cda9-67a9-57be-86fa-5b3c104eda73" -Graphs = "86223c79-3864-5bf0-83f7-82e725a168b6" -IJulia = "7073ff75-c697-5162-941a-fcdaad2a7d2a" -Interact = "c601a237-2ae4-5e1e-952c-7a85b0c7eef1" -Oscar = "f1435218-dba5-11e9-1e4d-f1a5fab5fc13" -Plots = "91a5bcdd-55d7-5caf-9e0b-520d859cae80" From f8ec869c4b112e173d4dff6ab719f72679030242 Mon Sep 17 00:00:00 2001 From: Aaruni Kaushik Date: Mon, 18 Mar 2024 14:52:25 +0100 Subject: [PATCH 11/11] Don't force Oscar 1.0, use whatever is latest --- .github/workflows/CI.yml | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/.github/workflows/CI.yml b/.github/workflows/CI.yml index e1c9307..cb1a3ce 100644 --- a/.github/workflows/CI.yml +++ b/.github/workflows/CI.yml @@ -41,7 +41,7 @@ jobs: julia -e ' using Pkg Pkg.add("IJulia") - Pkg.add(name="Oscar", version="1.0.0") + Pkg.add("Oscar") Pkg.add("BenchmarkTools") Pkg.add("GraphRecipes") Pkg.add("Graphs")