BioPortal: Violation breakdown

[matentzn]

I have run an analysis across all of Bioportal, this time the raw files instead of anything with imports merged. I found this picture insead (number is the number of ontologies affected):

useofundeclaredannotationproperty 201
useofundeclaredclass 85
illegalpunning 57
useofundeclaredobjectproperty 40
useofreservedvocabularyforclassiri 31
useofreservedvocabularyforannotationpropertyiri 23
insufficientindividuals 17
insufficientoperands 14
useofundeclareddatatype 12
useofundeclareddataproperty 12
useofnonsimplepropertyincardinalityrestriction 7
useofreservedvocabularyforobjectpropertyiri 6
useofnonsimplepropertyinasymmetricobjectpropertyaxiom 5
useofpropertyinchaincausescycle 3
lexicalnotinlexicalspace 3
useofnonsimplepropertyinirreflexivepropertyaxiom 2
datatypeirialsousedasclassiri 2
useofreservedvocabularyforontologyiri 1
useofnonsimplepropertyinfunctionalpropertyaxiom 1
useofnonsimplepropertyininversefunctionalobjectpropertyaxiom 1

Perhaps we should work off this list to agree on what repair to suggest.