From e809a53840d8820549396e0bf6e0861b46177764 Mon Sep 17 00:00:00 2001
From: Pablo Ricardo Arantes <35934150+pablo-arantes@users.noreply.github.com>
Date: Mon, 1 Jul 2024 17:31:05 -0700
Subject: [PATCH] Update trmsfkit.py

Fixed transpose the trmsf data.
---
 tRMSF/trmsfkit.py | 4 +++-
 1 file changed, 3 insertions(+), 1 deletion(-)

diff --git a/tRMSF/trmsfkit.py b/tRMSF/trmsfkit.py
index 2407167..af3d159 100644
--- a/tRMSF/trmsfkit.py
+++ b/tRMSF/trmsfkit.py
@@ -93,9 +93,11 @@ def _single_frame(self):
             avg_coordinates = self.avg_coordinates / self.seg_length
             # diff = self.reference_positions - avg_coordinates
             rmsf = np.sqrt(np.sum(avg_coordinates, axis=1))
-            self.results.trmsf[seg_num] = rmsf.T
+            self.results.trmsf[seg_num] = rmsf
 
     def _conclude(self):
         if not (self.results.trmsf >= 0).all():
             raise ValueError("Some RMSF values negative; overflow or underflow occurred")
+        else:
+            self.results.trmsf = self.results.trmsf.T