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NEWS.md

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mgi.report.reader 0.1.3

  • Added marker_type_definitions data set.
  • Renamed update_marker_symbol() to symbol_to_symbol().
  • Renamed convert_to_marker_id() to symbol_to_identifier().
  • symbol_to_symbol() and symbol_to_identifier() use data table backend with keyed column for improved look-up performance.
  • Mappings from symbols to symbols/identifiers is backed up by memoised functions making interactive experience a bit nicer.
  • Added bundled tiny examples of MRK_List1.rpt, accessible with report_example(), for examples and unit tests.
  • Renamed open_marker_in_mgi() to open_marker_id_in_mgi(), and added open_marker_symbol_in_mgi().

mgi.report.reader 0.1.2

  • Fix a bug in create_symbol_mapping() and create_id_mapping() regarding the removal of rows that appear more than once, but that are effectively the same mapping.

mgi.report.reader 0.1.1

  • Fix a bug in create_symbol_mapping() and create_id_mapping() regarding the removal of rows that appear more than once, i.e. rows that correspond to unresolvable mappings.

mgi.report.reader 0.1.0

  • Extensive documentation for supported MGI reports.
  • More flexible interface for read_report().
  • Report data is now accompanied by attributes providing report last modification date and source: report_last_modified() and report_source().
  • Marker crosswalks from old symbols: update_marker_symbol() and convert_to_marker_id().
  • New helper to quickly browse information about an MGI marker: open_marker_in_mgi().

mgi.report.reader 0.0.1

  • Initial CRAN submission.