achievements.md

title	header	description	permalink	layout
Publications | Shamrat Kumar Paul	Publications		/achievements/	default

Articles

[12] Emerging Biomarkers and Potential Therapeutics of the BCL-2 Protein Family: The Apoptotic and Anti-Apoptotic Context.
Saddam, M.; Paul, S.K.; Habib, M.A.; Fahim, M.A.; Mimi, A.; Islam, S.; Paul, B.; Helal, M.M.U. Egyptian Journal of Medical Human Genetics 25.1 (2024): 12. PDF{:target="_blank"} | Springer Open{:target="_blank"} |

[11] Miliary tuberculosis in an immune-competent Bangladeshi man—A case report.
Paul, S. K., Ahmed, S., Chakrabortty, R., Paul, S.K., & Rahman, M. A. (2023). Clinical Case Reports, 11(6), e7516. https://doi.org/10.1002/ccr3.7516 PDF{:target="_blank"} | Google Scholar{:target="_blank"} | Wiley Clinical Case Reports{:target="_blank"} | Pubmed{:target="_blank"}

[10] A computational investigation on Rho-related GTP-binding protein RhoB through molecular modeling and molecular dynamics simulation study.
Paul, S.K., Metu, C. L. N., Sutihar, S. K., Saddam, M., Paul, B., Kabir, M. L., & Helal, M. M. U. (2023). J Cell Signal. 2023;4(1):30-48. https://doi.org/10.33696/Signaling.4.089 PDF{:target="_blank"} | Google Scholar{:target="_blank"} | J Cell Signal.{:target="_blank"}

[09] Emerging Biomarkers and Potential Therapeutics of the BCL-2 Protein Family: The Apoptotic and Anti-Apoptotic Context.
Paul, S.K.; Saddam, M.; Habib, M.A.; Fahim, M.A.; Mimi, A.; Islam, S.; Paul, B.; Helal, M.M.U. Preprints 2023, 2023020387. https://doi.org/10.20944/preprints202302.0387.v1 PDF{:target="_blank"} | Preprints{:target="_blank"}

[08] A computational investigation on Rho-related GTP-binding protein RhoB through molecular modeling and molecular dynamics simulation study.
Paul, S.K., Metu, C. L. N., Sutihar, S. K., Saddam, M., Paul, B., Kabir, M. L., & Helal, M. M. U. (2023). BioRxiv, 2023.02.14.528547. https://doi.org/10.1101/2023.02.14.528547 PDF{:target="_blank"} | BioRxiv{:target="_blank"}

[07] Molecular modeling, molecular dynamics simulation, and essential dynamics analysis of grancalcin: An upregulated biomarker in experimental autoimmune encephalomyelitis mice.
Paul, S.K., Saddam, M., Rahaman K.A., Choi, J.G., Lee, S. S., Hasan, M. (2022). Heliyon, e11232. (Q1; IF: 3.776). https://doi.org/10.1016/j.heliyon.2022.e11232. PDF{:target="_blank"} | PUBMED{:target="_blank"}

[06] Natural Product-Based Potential Therapeutic Interventions of Pulmonary Fibrosis.
Hasan, M., Paul, N.C., Paul, S.K., Saikat, A.S.M., Akter, H., Mandal, M., Lee, S.-S. (2022). Molecules 2022, 27(5), 1481. https://doi.org/10.3390/molecules27051481. (Q1, IF: 4.414). PDF{:target="_blank"} | PUBMED{:target="_blank"}

[05] Potential Role of CCN Proteins on Breast Cancer: Therapeutic Advances and Perspectives.
Ahmed, K.A.; Hasib, T.A.; Paul, S.K., Saddam, M., Mimi, A., Saikat, A.S.M., Faruque, H.-A., Rahman, M.A., Uddin, M.J., K im, B. (2021). Curr. Oncol. 2021, 28, 4972-4985. https://doi.org/10.3390/molecules27051481. (Q2, IF: 3.677). PDF{:target="_blank"} | PUBMED{:target="_blank"}

[04] An insight into pathophysiological features and therapeutic advances on ependymoma.
Seo, S.-H., Paul, S.K., Shikder, M., Khanam, M., Ghosh, P., Hasib, T.A, Ahmed, K.A., Sikdar, S., Uddin, M.J., & Kwon, Y. (2021). Cancers 2021, 13, 3221. https://doi.org/10.3390/cancers13133221. (Q1, IF: 6.639). PDF{:target="_blank"} | PUBMED{:target="_blank"}

[03] Microarray Data Analysis Using GEO2R to Identify Differentially Expressed Genes in Ovarian Cancer after NSC319726 Treatment and Pathway Analysis.
Paul, S.K., Banerjee, S., Karunagaran, D. Internship Report (GRIESHMA'20), 2020, Prof. D Kaunagaran's Cancer Biology Lab, Indian Institute of Technology Madras, Chennai 600036, India. ResearchGate{:target="_blank"}

[02] In Silico Design and Homology Modeling of Helicase C-Terminal Domain of Nonstructural Protein NS3 of West Nile Virus (Strain NY-99).
Paul, S.K., Khalipha, A.B.R., Kabir, M.L., Ray, P., Mina, M.A., Masum, H.M. In Lecture Notes in Electrical Engineering (Vol. 602). https://doi.org/10.1007/978-981-15-0829-5_68. PDF{:target="_blank"} | SpringerLink{:target="_blank"}

[01] Structure prediction and functional characterization of Uncharacterized Protein Rv1708 of Mycobacterium tuberculosis (Strain ATCC 25618/H37Rv).
Paul, S.K., Hasib, T.A., Ray, P., Kabir, L., Khalipha, A.B.R. In Biotechnology and Biological Sciences, 2019 (pp. 179-184). CRC Press. https://doi.org/10.1201/9781003001614-30. PDF{:target="_blank"} | T&FOnline{:target="_blank"}

Conference Presentations

11. Structure prediction and functional characterization of Uncharacterized Protein Rv1708 of Mycobacterium tuberculosis (Strain ATCC 25618/H37Rv).
Paul, S.K., Hasib, T.A., Ray, P., Kabir, M.L., Khalipha, A.B.R. 3rd International Conference on Biotechnology and Biological Sciences, Organized by Department of Biotechnology, University of Engineering & Management, Kolkata, India. August, 8-10, 2019. (Oral presentation)

10. Development and Molecular Modeling of PETase enzyme for Degradation of Polyethylene terephthalate (PET) from Ideonella sakaiensis (strain 201-F6).
Paul, S.K., Rizvy, T.K., Hasib, T.A., Hossain, M.M., Kabir, M.L., Khaliph, A.B.R. 1st Chittagong Science Carnival-2019, Hosted by Chittagong University Scientific Society, Organized by Chittagong University Robotics & Innovation Club, University of Chittagong, Chittagong 4331, Bangladesh. April 23, 2019. (Poster presesntation)

09. Functional Characterization of PETase enzyme for Degradation of Polyethylene terephthalate (PET); An In-Silico Approach.
Paul, S.K., Hasib, T.A.; Rizvy, T.K. BUP Environmental Fest 2019, Bangladesh University of Professionals, Dhaka 1216, Bangladesh. April 01, 2019. (Poster presentation)

08. In-Silico Design and Homology Modeling of Helicase C-terminal Domain of Nonstructural Protein NS3 of West Nile Virus (strain NY-99).
Paul, S.K., Khalipha, A.B.R., Kabir, M.L., Ray, P., Mina, M.A., Masum, H.M. 2nd International Conference on Communication, Devices and Computing (ICCDC 2019), Haldia Institute of Technology, Kolkata, India. 14-15 March, 2019. (Oral presentation).

07. Investigation of Low Nod Factor Production of Soil Bacteria Sinorhizobium meliloti and It's Effect in Nodulation.
Paul, S.K., Mina, M.A., Sultana, F., Rizvy, T.K, Monir, M.M., Saddam, M, Hasib, T.A., Alom, M., Ahmed, K.A., Masum, H.M. International Conference on Environmental Science and Resource Management (ICESRM 2019), Organised by Dept. of Environmental Science and Resource Management, Mawlana Bhashani Science and Technology University, Tangail, Bangladesh. 08 February, 2019. (Accepted for oral presentation but not presented)

06. Molecular Docking Study of Tetrabenazine for Targeting Huntingtin Protein.
Paul, S.K., Kabir M. L., Mina, M. A., Rizvy, T. K. 2nd International Conference on Biotechnology and Biological Sciences; Biospectrum 2018, University of Engineering & Management, Kolkata, West Bengal, India. July 27-28, 2018. (Poster presentation)

05. Gel Electrophoresis with Bio-Hacking Device & DIY DNA Extraction.
Paul, S.K., Rizvy, T.K., Hasib, T.A., Monir, M.M. The Ultimate Innovator Hunt 2018-IEEE RUET Student Branch, Rajshahi University of Engineering & Technology, Rajshahi, Bangladesh. July 06, 2018. (Project showcasing; accepted for first round but not presented)

04. In Silico Molecular Docking Study of Delafloxacin against 4MQT; The Treatment of Acute Bacterial Skin And Skin Structure Infections.
Paul, S.K., Khalipha, A.B.R., Hossain, S., Islam, M.T. BAUET Tech Fair 2K18, Bangladesh Army University of Engineering & Technology, Natore, Bangladesh. May 10, 2018. (Awarded prize for the 3rd best poster)*

03. Gel Electrophoresis with Bio-Hacking Device & DIY DNA Extraction.
Paul, S.K., Haque, E., Sultana, F., Ahmed, A.K., Monir, M.M., Mokhlasur, M., Hossain, M.R., Saddam, M., Rizvy, T.K., Hasib, T.A. BAUET Tech Fair 2K18, Bangladesh Army University of Engineering & Technology, Natore, Bangladesh. May 10, 2018. (Project showcasing)

02. A review study on antibiotic practices from Chittagong, Dhaka, Gopalganj & Rajshahi region of Bangladesh.
Paul, S.K., Kabir, M.L., Rana, M., Sonia, Z. A., Kabir, M.L. International Conference on Chemical Science & Technology and 40th Annual General Meeting of Bangladesh Chemical Society, Department of Chemistry Khulna University of Engineering & Technology, Khulna, Bangladesh. 24-25 February, 2018. (Abstract).

01. Searching Potential Inhibitors for Targeting Toll-like Receptor 4 (TLR4) Protein by Virtual Screening.
Paul, S.K., Mina, M.A, Islam, M., Islam, A., Singha, S., Hossain, M., Rima, S.A., Halim, M.A. 38th Annual Conference, Bangladesh Chemical Society, Chittagong, Bangladesh. March 31, 2017. (Oral presentation).