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GoalGraph.gv.txt
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GoalGraph.gv.txt
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digraph regexp {
rankdir="BT"
fontname="Helvetica,Arial,sans-serif"
node [fontname="Helvetica,Arial,sans-serif", style=rounded, shape=box]
showall [label="showall" style="bold"];
show [label="show" style="bold"];
commonsetup [label="f:commonsetup"];
taxdownload [label="d:taxdownload"];
taxtree [label="o:taxtree"];
taxnodes [label="o:taxnodes"];
refseqrelease [label="d:refseqrelease"];
refseqcat [label="d:refseqcat"];
checksummap [label="o:checksummap"];
clear [label="f:clear" style="bold"];
categories [label="o:categories"];
refseqfna [label="d:refseqfna"];
accmapsize [label="o:accmapsize"];
accmap [label="o:accmap"];
taxfromgenbank [label="o:taxfromgenbank"];
assemblydownload [label="d:assemblydownload"];
fastasgenbank [label="o:fastasgenbank"];
fastasgenbankdl [label="d:fastasgenbankdl"];
adddownloads [label="d:adddownloads"];
addfastas [label="o:addfastas"];
fillsize [label="o:fillsize"];
tempindex [label="o:tempindex"];
filldb [label="o:filldb"];
tempdb [label="f:tempdb"];
loadtempdb [label="o:loadtempdb"];
updatedb [label="o:updatedb"];
db [label="f:db" style="bold"];
loaddb [label="o:loaddb"];
fillindex [label="o:fillindex"];
index [label="f:index" style="bold"];
loadindex [label="o:loadindex"];
dbinfo [label="f:dbinfo" style="bold"];
genall [label="genall" style="bold"];
db2fastqtaxids [label="o:db2fastqtaxids"];
db2fastq [label="f:db2fastq" style="bold"];
fastqmap [label="o:fastqmap"];
fastqmaptransform [label="o:fastqmaptransform"];
fastqdownload [label="d:fastqdownload"];
filter [label="f:filter" style="bold"];
match [label="f:match" style="bold"];
matchlr [label="f:matchlr" style="bold"];
krakenres [label="f:krakenres"];
taxdownload -> commonsetup;
taxtree -> taxdownload;
taxnodes -> taxtree;
refseqrelease -> commonsetup;
refseqcat -> commonsetup;
refseqcat -> refseqrelease;
checksummap -> refseqcat;
refseqfna -> categories;
refseqfna -> refseqcat;
refseqfna -> checksummap;
accmapsize -> categories;
accmapsize -> refseqcat;
accmapsize -> refseqfna;
accmap -> categories;
accmap -> refseqcat;
accmap -> refseqfna;
accmap -> accmapsize;
taxfromgenbank -> categories;
taxfromgenbank -> taxnodes;
taxfromgenbank -> refseqfna;
taxfromgenbank -> accmap;
assemblydownload -> commonsetup;
fastasgenbank -> taxtree;
fastasgenbank -> taxfromgenbank;
fastasgenbank -> assemblydownload;
fastasgenbankdl -> fastasgenbank;
addfastas -> adddownloads;
addfastas -> taxtree;
addfastas -> fastasgenbank;
addfastas -> fastasgenbankdl;
fillsize -> categories;
fillsize -> taxnodes;
fillsize -> refseqfna;
fillsize -> accmap;
fillsize -> addfastas;
tempindex -> taxnodes;
tempindex -> refseqfna;
tempindex -> accmap;
tempindex -> fillsize;
tempindex -> addfastas;
filldb -> categories;
filldb -> taxnodes;
filldb -> refseqfna;
filldb -> accmap;
filldb -> tempindex;
filldb -> taxtree;
filldb -> addfastas;
tempdb -> filldb;
loadtempdb -> tempdb;
loadtempdb -> filldb [style=dotted];
updatedb -> addfastas;
updatedb -> categories;
updatedb -> taxtree;
updatedb -> refseqfna;
updatedb -> accmap;
updatedb -> loadtempdb;
db -> tempdb;
db -> updatedb;
loaddb -> updatedb [style=dotted];
loaddb -> db;
fillindex -> loaddb;
index -> fillindex;
loadindex -> fillindex [style=dotted];
loadindex -> index;
dbinfo -> loaddb;
genall -> dbinfo;
genall -> index;
db2fastqtaxids -> loaddb;
db2fastq -> db2fastqtaxids;
db2fastq -> loaddb;
fastqmaptransform -> fastqmap;
fastqdownload -> fastqmap;
fastqdownload -> fastqmaptransform;
filter -> fastqdownload;
filter -> loadindex;
filter -> fastqmaptransform;
match -> fastqdownload;
match -> loaddb;
match -> fastqmaptransform;
matchlr -> fastqdownload;
matchlr -> loaddb;
matchlr -> fastqmaptransform;
krakenres -> fastqdownload;
krakenres -> taxnodes;
krakenres -> fastqmaptransform;
}