chore(deps): bump com.nimbusds:oauth2-oidc-sdk from 11.20.1 to 11.22.2 #6637
Triggered via pull request
February 12, 2025 17:53
dependabot[bot]
Status
Success
Total duration
39m 40s
Artifacts
–
ci-test.yml
on: pull_request
docs-build
4m 56s
Matrix: gradle-build
Annotations
18 errors and 24 warnings
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ProjectIT.testCreateProject():
src/test/java/ca/corefacility/bioinformatics/irida/web/controller/test/integration/project/ProjectIT.java#L82
org.opentest4j.AssertionFailedError: Result of POST must equal result of GET ==> expected: <true> but was: <false>
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ProjectIT.testCreateProject():
src/test/java/ca/corefacility/bioinformatics/irida/web/controller/test/integration/project/ProjectIT.java#L82
org.opentest4j.AssertionFailedError: Result of POST must equal result of GET ==> expected: <true> but was: <false>
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SequencingRunServiceImplIT.testAddSequenceFileToMiseqRunAsAdmin():
src/test/java/ca/corefacility/bioinformatics/irida/service/impl/integration/SequencingRunServiceImplIT.java#L71
org.opentest4j.AssertionFailedError: Saved miseq run should have seqence file ==> expected: <true> but was: <false>
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AnalysisExecutionServiceGalaxyIT.testExecuteAnalysisSuccess():
src/test/java/ca/corefacility/bioinformatics/irida/service/analysis/execution/galaxy/impl/integration/AnalysisExecutionServiceGalaxyIT.java#L247
java.util.concurrent.ExecutionException: java.lang.IllegalStateException: path 21/1/testReference12310029470502753005.fasta does not exist
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AnalysisExecutionServiceGalaxyIT.testPrepareSubmissionFailInvalidGalaxyWorkflowFile():
src/test/java/ca/corefacility/bioinformatics/irida/service/analysis/execution/galaxy/impl/integration/AnalysisExecutionServiceGalaxyIT.java#L1
java.sql.SQLIntegrityConstraintViolationException: Cannot delete or update a parent row: a foreign key constraint fails (`irida_integration_test`.`qc_entry`, CONSTRAINT `FK_SEQOBJECT_QC_ENTRY` FOREIGN KEY (`sequencingObject_id`) REFERENCES `sequencing_object` (`id`))
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AnalysisExecutionServiceGalaxyIT.testTransferAnalysisResultsSuccessPhylogenomics():
src/test/java/ca/corefacility/bioinformatics/irida/service/analysis/execution/galaxy/impl/integration/AnalysisExecutionServiceGalaxyIT.java#L1
java.sql.SQLIntegrityConstraintViolationException: Cannot delete or update a parent row: a foreign key constraint fails (`irida_integration_test`.`analysis_submission`, CONSTRAINT `FK_ANALYIS_SUBMISSION_SUBMITTER_ID` FOREIGN KEY (`submitter`) REFERENCES `user` (`id`))
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AnalysisExecutionScheduledTaskImplIT.testFullAnalysisRunSuccessNoCleanupAge():
src/test/java/ca/corefacility/bioinformatics/irida/service/impl/integration/AnalysisExecutionScheduledTaskImplIT.java#L191
java.util.concurrent.ExecutionException: java.lang.IllegalStateException: path 31/1/testReference11271915329819277488.fasta does not exist
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AnalysisExecutionScheduledTaskImplIT.testFullAnalysisRunFailErrorWithJob():
src/test/java/ca/corefacility/bioinformatics/irida/service/impl/integration/AnalysisExecutionScheduledTaskImplIT.java#L402
java.util.concurrent.ExecutionException: java.lang.IllegalStateException: path 34/1/testReference12734670015964255020.fasta does not exist
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LoginPageLdapNoServerIT.testLoginNoLdapServer():
src/test/java/ca/corefacility/bioinformatics/irida/ria/integration/LoginPageLdapNoServerIT.java#L41
org.opentest4j.AssertionFailedError: expected: <http://127.0.0.1:37199/irida/login?ldap-error=6> but was: <http://127.0.0.1:37199/irida/login?error=true>
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AnalysisDetailsPageIT.testUnknownPipelineOutput():
src/test/java/ca/corefacility/bioinformatics/irida/ria/integration/analysis/AnalysisDetailsPageIT.java#L450
org.opentest4j.AssertionFailedError: There should be one output file ==> expected: <1> but was: <0>
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AnalysisDetailsPageIT.testOutputFiles():
src/test/java/ca/corefacility/bioinformatics/irida/ria/integration/analysis/AnalysisDetailsPageIT.java#L139
org.openqa.selenium.TimeoutException: Expected condition failed: waiting for visibility of element located by By.cssSelector: span[title='Output File Preview'] (tried for 10 second(s) with 500 milliseconds interval)
Build info: version: '4.1.4', revision: '535d840ee2'
System info: host: 'fv-az982-663', ip: '10.1.0.42', os.name: 'Linux', os.arch: 'amd64', os.version: '5.15.0-1078-azure', java.version: '17.0.14'
Driver info: org.openqa.selenium.chrome.ChromeDriver
Capabilities {acceptInsecureCerts: false, browserName: chrome, browserVersion: 133.0.6943.53, chrome: {chromedriverVersion: 133.0.6943.53 (9a80935019b0..., userDataDir: /tmp/.org.chromium.Chromium...}, fedcm:accounts: true, goog:chromeOptions: {debuggerAddress: localhost:40523}, javascriptEnabled: true, networkConnectionEnabled: false, pageLoadStrategy: normal, platform: LINUX, platformName: LINUX, proxy: Proxy(), se:cdp: ws://localhost:40523/devtoo..., se:cdpVersion: 133.0.6943.53, setWindowRect: true, strictFileInteractability: false, timeouts: {implicit: 0, pageLoad: 300000, script: 30000}, unhandledPromptBehavior: dismiss and notify, webauthn:extension:credBlob: true, webauthn:extension:largeBlob: true, webauthn:extension:minPinLength: true, webauthn:extension:prf: true, webauthn:virtualAuthenticators: true}
Session ID: 979057c5ffd34a432cb71ff1273fa0e8
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AnalysisDetailsPageIT.testSistrOutput():
src/test/java/ca/corefacility/bioinformatics/irida/ria/integration/analysis/AnalysisDetailsPageIT.java#L285
org.openqa.selenium.TimeoutException: Expected condition failed: waiting for number of elements found by By.className: ant-page-header-heading-title to be "2". Current number: "1" (tried for 2 second(s) with 500 milliseconds interval)
Build info: version: '4.1.4', revision: '535d840ee2'
System info: host: 'fv-az982-663', ip: '10.1.0.42', os.name: 'Linux', os.arch: 'amd64', os.version: '5.15.0-1078-azure', java.version: '17.0.14'
Driver info: org.openqa.selenium.chrome.ChromeDriver
Capabilities {acceptInsecureCerts: false, browserName: chrome, browserVersion: 133.0.6943.53, chrome: {chromedriverVersion: 133.0.6943.53 (9a80935019b0..., userDataDir: /tmp/.org.chromium.Chromium...}, fedcm:accounts: true, goog:chromeOptions: {debuggerAddress: localhost:40523}, javascriptEnabled: true, networkConnectionEnabled: false, pageLoadStrategy: normal, platform: LINUX, platformName: LINUX, proxy: Proxy(), se:cdp: ws://localhost:40523/devtoo..., se:cdpVersion: 133.0.6943.53, setWindowRect: true, strictFileInteractability: false, timeouts: {implicit: 0, pageLoad: 300000, script: 30000}, unhandledPromptBehavior: dismiss and notify, webauthn:extension:credBlob: true, webauthn:extension:largeBlob: true, webauthn:extension:minPinLength: true, webauthn:extension:prf: true, webauthn:virtualAuthenticators: true}
Session ID: 979057c5ffd34a432cb71ff1273fa0e8
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AnalysisDetailsPageIT.testProvenance():
src/test/java/ca/corefacility/bioinformatics/irida/ria/integration/analysis/AnalysisDetailsPageIT.java#L206
org.openqa.selenium.TimeoutException: Expected condition failed: waiting for visibility of element located by By.cssSelector: span[title='Provenance'] (tried for 10 second(s) with 500 milliseconds interval)
Build info: version: '4.1.4', revision: '535d840ee2'
System info: host: 'fv-az982-663', ip: '10.1.0.42', os.name: 'Linux', os.arch: 'amd64', os.version: '5.15.0-1078-azure', java.version: '17.0.14'
Driver info: org.openqa.selenium.chrome.ChromeDriver
Capabilities {acceptInsecureCerts: false, browserName: chrome, browserVersion: 133.0.6943.53, chrome: {chromedriverVersion: 133.0.6943.53 (9a80935019b0..., userDataDir: /tmp/.org.chromium.Chromium...}, fedcm:accounts: true, goog:chromeOptions: {debuggerAddress: localhost:40523}, javascriptEnabled: true, networkConnectionEnabled: false, pageLoadStrategy: normal, platform: LINUX, platformName: LINUX, proxy: Proxy(), se:cdp: ws://localhost:40523/devtoo..., se:cdpVersion: 133.0.6943.53, setWindowRect: true, strictFileInteractability: false, timeouts: {implicit: 0, pageLoad: 300000, script: 30000}, unhandledPromptBehavior: dismiss and notify, webauthn:extension:credBlob: true, webauthn:extension:largeBlob: true, webauthn:extension:minPinLength: true, webauthn:extension:prf: true, webauthn:virtualAuthenticators: true}
Session ID: 979057c5ffd34a432cb71ff1273fa0e8
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AnalysisDetailsPageIT.testSamplesPage():
src/test/java/ca/corefacility/bioinformatics/irida/ria/integration/analysis/AnalysisDetailsPageIT.java#L236
org.openqa.selenium.NoSuchElementException: no such element: Unable to locate element: {"method":"css selector","selector":"span[title='Samples']"}
(Session info: chrome=133.0.6943.53)
For documentation on this error, please visit: https://selenium.dev/exceptions/#no_such_element
Build info: version: '4.1.4', revision: '535d840ee2'
System info: host: 'fv-az982-663', ip: '10.1.0.42', os.name: 'Linux', os.arch: 'amd64', os.version: '5.15.0-1078-azure', java.version: '17.0.14'
Driver info: org.openqa.selenium.chrome.ChromeDriver
Command: [979057c5ffd34a432cb71ff1273fa0e8, findChildElement {id=f.66373514E5F6196A4FCE34E553C20D18.d.C7AD7243C7C037CBE1AE6FB7862187F4.e.4194, using=css selector, value=span[title='Samples']}]
Capabilities {acceptInsecureCerts: false, browserName: chrome, browserVersion: 133.0.6943.53, chrome: {chromedriverVersion: 133.0.6943.53 (9a80935019b0..., userDataDir: /tmp/.org.chromium.Chromium...}, fedcm:accounts: true, goog:chromeOptions: {debuggerAddress: localhost:40523}, javascriptEnabled: true, networkConnectionEnabled: false, pageLoadStrategy: normal, platform: LINUX, platformName: LINUX, proxy: Proxy(), se:cdp: ws://localhost:40523/devtoo..., se:cdpVersion: 133.0.6943.53, setWindowRect: true, strictFileInteractability: false, timeouts: {implicit: 0, pageLoad: 300000, script: 30000}, unhandledPromptBehavior: dismiss and notify, webauthn:extension:credBlob: true, webauthn:extension:largeBlob: true, webauthn:extension:minPinLength: true, webauthn:extension:prf: true, webauthn:virtualAuthenticators: true}
Session ID: 979057c5ffd34a432cb71ff1273fa0e8
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AnalysisDetailsPageIT.testPipelineResultsWithoutSpecialTab():
src/test/java/ca/corefacility/bioinformatics/irida/ria/integration/analysis/AnalysisDetailsPageIT.java#L193
org.opentest4j.AssertionFailedError: There should be one output file ==> expected: <1> but was: <0>
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AnalysisDetailsPageIT.testTabRoutingAnalysisCompleted():
src/test/java/ca/corefacility/bioinformatics/irida/ria/integration/analysis/AnalysisDetailsPageIT.java#L316
org.openqa.selenium.TimeoutException: Expected condition failed: waiting for number of elements found by By.className: ant-page-header-heading-title to be "2". Current number: "0" (tried for 2 second(s) with 500 milliseconds interval)
Build info: version: '4.1.4', revision: '535d840ee2'
System info: host: 'fv-az982-663', ip: '10.1.0.42', os.name: 'Linux', os.arch: 'amd64', os.version: '5.15.0-1078-azure', java.version: '17.0.14'
Driver info: org.openqa.selenium.chrome.ChromeDriver
Capabilities {acceptInsecureCerts: false, browserName: chrome, browserVersion: 133.0.6943.53, chrome: {chromedriverVersion: 133.0.6943.53 (9a80935019b0..., userDataDir: /tmp/.org.chromium.Chromium...}, fedcm:accounts: true, goog:chromeOptions: {debuggerAddress: localhost:40523}, javascriptEnabled: true, networkConnectionEnabled: false, pageLoadStrategy: normal, platform: LINUX, platformName: LINUX, proxy: Proxy(), se:cdp: ws://localhost:40523/devtoo..., se:cdpVersion: 133.0.6943.53, setWindowRect: true, strictFileInteractability: false, timeouts: {implicit: 0, pageLoad: 300000, script: 30000}, unhandledPromptBehavior: dismiss and notify, webauthn:extension:credBlob: true, webauthn:extension:largeBlob: true, webauthn:extension:minPinLength: true, webauthn:extension:prf: true, webauthn:virtualAuthenticators: true}
Session ID: 979057c5ffd34a432cb71ff1273fa0e8
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AnalysisDetailsPageIT.testTreeOutput():
src/test/java/ca/corefacility/bioinformatics/irida/ria/integration/analysis/AnalysisDetailsPageIT.java#L379
org.openqa.selenium.TimeoutException: Expected condition failed: waiting for number of elements found by By.className: ant-page-header-heading-title to be "2". Current number: "0" (tried for 2 second(s) with 500 milliseconds interval)
Build info: version: '4.1.4', revision: '535d840ee2'
System info: host: 'fv-az982-663', ip: '10.1.0.42', os.name: 'Linux', os.arch: 'amd64', os.version: '5.15.0-1078-azure', java.version: '17.0.14'
Driver info: org.openqa.selenium.chrome.ChromeDriver
Capabilities {acceptInsecureCerts: false, browserName: chrome, browserVersion: 133.0.6943.53, chrome: {chromedriverVersion: 133.0.6943.53 (9a80935019b0..., userDataDir: /tmp/.org.chromium.Chromium...}, fedcm:accounts: true, goog:chromeOptions: {debuggerAddress: localhost:40523}, javascriptEnabled: true, networkConnectionEnabled: false, pageLoadStrategy: normal, platform: LINUX, platformName: LINUX, proxy: Proxy(), se:cdp: ws://localhost:40523/devtoo..., se:cdpVersion: 133.0.6943.53, setWindowRect: true, strictFileInteractability: false, timeouts: {implicit: 0, pageLoad: 300000, script: 30000}, unhandledPromptBehavior: dismiss and notify, webauthn:extension:credBlob: true, webauthn:extension:largeBlob: true, webauthn:extension:minPinLength: true, webauthn:extension:prf: true, webauthn:virtualAuthenticators: true}
Session ID: 979057c5ffd34a432cb71ff1273fa0e8
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AnalysisDetailsPageIT.testAnalysisDetails():
src/test/java/ca/corefacility/bioinformatics/irida/ria/integration/analysis/AnalysisDetailsPageIT.java#L73
org.opentest4j.AssertionFailedError: The correct details are displayed for the analysis ==> expected: <true> but was: <false>
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gradle-build (open_api_testing)
The Ubuntu-20.04 brownout takes place from 2025-02-01. For more details, see https://github.com/actions/runner-images/issues/11101
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gradle-build (open_api_testing)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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gradle-build (open_api_testing)
Cache not found for keys: Linux-pnpm-store-1266ba08cf7c9ca67a51bd4fb7ee80a69cc2caf5160d59fec8fcdc3a83a82ce7, Linux-pnpm-store-
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docs-build
The Ubuntu-20.04 brownout takes place from 2025-02-01. For more details, see https://github.com/actions/runner-images/issues/11101
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docs-build
Cache not found for keys: Linux-pnpm-store-1266ba08cf7c9ca67a51bd4fb7ee80a69cc2caf5160d59fec8fcdc3a83a82ce7, Linux-pnpm-store-
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docs-build
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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gradle-build (file_system_testing)
The Ubuntu-20.04 brownout takes place from 2025-02-01. For more details, see https://github.com/actions/runner-images/issues/11101
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gradle-build (file_system_testing)
Cache not found for keys: Linux-pnpm-store-1266ba08cf7c9ca67a51bd4fb7ee80a69cc2caf5160d59fec8fcdc3a83a82ce7, Linux-pnpm-store-
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gradle-build (file_system_testing)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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gradle-build (rest_testing)
The Ubuntu-20.04 brownout takes place from 2025-02-01. For more details, see https://github.com/actions/runner-images/issues/11101
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gradle-build (rest_testing)
Cache not found for keys: Linux-pnpm-store-1266ba08cf7c9ca67a51bd4fb7ee80a69cc2caf5160d59fec8fcdc3a83a82ce7, Linux-pnpm-store-
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gradle-build (rest_testing)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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gradle-build (service_testing)
The Ubuntu-20.04 brownout takes place from 2025-02-01. For more details, see https://github.com/actions/runner-images/issues/11101
|
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gradle-build (service_testing)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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gradle-build (service_testing)
Cache not found for keys: Linux-pnpm-store-1266ba08cf7c9ca67a51bd4fb7ee80a69cc2caf5160d59fec8fcdc3a83a82ce7, Linux-pnpm-store-
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gradle-build (galaxy_testing)
The Ubuntu-20.04 brownout takes place from 2025-02-01. For more details, see https://github.com/actions/runner-images/issues/11101
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gradle-build (galaxy_testing)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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gradle-build (galaxy_testing)
Cache not found for keys: Linux-pnpm-store-1266ba08cf7c9ca67a51bd4fb7ee80a69cc2caf5160d59fec8fcdc3a83a82ce7, Linux-pnpm-store-
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gradle-build (galaxy_pipeline_testing)
The Ubuntu-20.04 brownout takes place from 2025-02-01. For more details, see https://github.com/actions/runner-images/issues/11101
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gradle-build (galaxy_pipeline_testing)
Cache not found for keys: Linux-pnpm-store-1266ba08cf7c9ca67a51bd4fb7ee80a69cc2caf5160d59fec8fcdc3a83a82ce7, Linux-pnpm-store-
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gradle-build (galaxy_pipeline_testing)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
|
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gradle-build (ui_testing)
The Ubuntu-20.04 brownout takes place from 2025-02-01. For more details, see https://github.com/actions/runner-images/issues/11101
|
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gradle-build (ui_testing)
Cache not found for keys: Linux-pnpm-store-1266ba08cf7c9ca67a51bd4fb7ee80a69cc2caf5160d59fec8fcdc3a83a82ce7, Linux-pnpm-store-
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gradle-build (ui_testing)
The `set-output` command is deprecated and will be disabled soon. Please upgrade to using Environment Files. For more information see: https://github.blog/changelog/2022-10-11-github-actions-deprecating-save-state-and-set-output-commands/
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