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upgraded checkm resourced to high Pipeline CI #69: Commit 6fdb770 pushed by mattheww95
February 2, 2024 21:16 31s main
main
February 2, 2024 21:16 31s
removed -y flag from minimap2 as it causes parsing errors Pipeline CI #68: Commit 7870023 pushed by mattheww95
December 14, 2023 16:54 24s main
main
December 14, 2023 16:54 24s
added option to keep comments in fastq to mm2 args Pipeline CI #67: Commit caf1865 pushed by mattheww95
December 14, 2023 16:47 2m 50s main
main
December 14, 2023 16:47 2m 50s
updated default parmeters for some organisms Pipeline CI #66: Commit 939a06e pushed by mattheww95
December 13, 2023 15:30 30s main
main
December 13, 2023 15:30 30s
fixed typo Pipeline CI #65: Commit 27597b2 pushed by mattheww95
December 12, 2023 22:52 47s main
main
December 12, 2023 22:52 47s
updated final quality messages Pipeline CI #64: Commit 1789eb9 pushed by mattheww95
December 12, 2023 20:03 29s main
main
December 12, 2023 20:03 29s
updated quality messages Pipeline CI #63: Commit 89e2a30 pushed by mattheww95
December 12, 2023 20:02 40s main
main
December 12, 2023 20:02 40s
altered default percent quality phred Pipeline CI #62: Commit 30512f4 pushed by mattheww95
December 12, 2023 17:53 26s main
main
December 12, 2023 17:53 26s
Merge pull request #18 from phac-nml/dev Pipeline CI #61: Commit ebc7824 pushed by mattheww95
December 12, 2023 17:52 29s main
main
December 12, 2023 17:52 29s
removed local executor from report tsv creation Pipeline CI #60: Commit 0234ea1 pushed by mattheww95
November 27, 2023 20:57 26s main
main
November 27, 2023 20:57 26s
fixed issue with samples failing in assembly not having results for m… Pipeline CI #59: Commit eb13a31 pushed by mattheww95
November 23, 2023 19:47 25s main
main
November 23, 2023 19:47 25s
updated python container, fedora container had run issues on azure Pipeline CI #58: Commit 8425e33 pushed by mattheww95
November 16, 2023 22:09 26s main
main
November 16, 2023 22:09 26s
upgraded mash screen resources Pipeline CI #57: Commit c62d4c7 pushed by mattheww95
November 16, 2023 20:03 28s main
main
November 16, 2023 20:03 28s
fixed unzipping behaviour of mash screen Pipeline CI #56: Commit 952b980 pushed by mattheww95
November 16, 2023 18:38 27s main
main
November 16, 2023 18:38 27s
fixed process specifier for mash processes Pipeline CI #55: Commit 96f3071 pushed by mattheww95
November 16, 2023 16:05 34s main
main
November 16, 2023 16:05 34s
Merge branch 'main' of https://github.com/phac-nml/mikrokondo into main Pipeline CI #54: Commit 75c30dc pushed by mattheww95
November 15, 2023 21:28 29s main
main
November 15, 2023 21:28 29s
updated permissions on bin scripts Pipeline CI #53: Commit 2bf4242 pushed by mattheww95
November 15, 2023 17:43 27s main
main
November 15, 2023 17:43 27s
updated container registry paths Pipeline CI #52: Commit 15dfbbb pushed by mattheww95
November 15, 2023 16:30 33s main
main
November 15, 2023 16:30 33s
added better error message Pipeline CI #51: Commit 4f8e2ba pushed by mattheww95
November 10, 2023 20:51 31s main
main
November 10, 2023 20:51 31s
workflow obeys validate params flag now Pipeline CI #50: Commit ad48c85 pushed by mattheww95
November 9, 2023 20:04 33s main
main
November 9, 2023 20:04 33s
Merge branch 'main' of https://github.com/phac-nml/mikrokondo into main Pipeline CI #49: Commit ddc7646 pushed by mattheww95
November 6, 2023 21:22 34s main
main
November 6, 2023 21:22 34s
Merge pull request #12 from phac-nml/dev Pipeline CI #48: Commit a90f3a9 pushed by mattheww95
November 2, 2023 22:06 35s main
main
November 2, 2023 22:06 35s
Merge pull request #10 from phac-nml/dev Pipeline CI #47: Commit 66b7650 pushed by mattheww95
October 31, 2023 18:45 46s main
main
October 31, 2023 18:45 46s
updated todos Pipeline CI #46: Commit 732da5a pushed by mattheww95
October 30, 2023 21:29 34s main
main
October 30, 2023 21:29 34s
updated todo, params args being passed need to be in a closure then p… Pipeline CI #45: Commit bb181a0 pushed by mattheww95
October 27, 2023 18:00 37s main
main
October 27, 2023 18:00 37s
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