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_config.yml
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_config.yml
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#######################################################################################
# Book settings
title : "" # The title of the book. Will be placed in the left navbar.
author : "" # The author of the book
logo : "./_static/cookbook-logo-small.png" # A path to the book logo
exclude_patterns : [.github/*, README.md, venv/*, node_modules/*, _content_not_in_toc/* ] # Patterns to skip when building the book. Can be glob-style (e.g. "*skip.ipynb")
#######################################################################################
# Execution settings
execute:
execute_notebooks : off # Whether to execute notebooks at build time. Must be one of ("auto", "force", "cache", "off")
cache : "" # A path to the jupyter cache that will be used to store execution artifacs. Defaults to `_build/.jupyter_cache/`
exclude_patterns : [] # A list of patterns to *skip* in execution (e.g. a notebook that takes a really long time)
#######################################################################################
# HTML-specific settings
html:
favicon : "./_static/images/logo/favicon.ico" # A path to a favicon image
navbar_number_sections : True # Add a number to each section in your left navbar
use_edit_page_button : True # Whether to add an "edit this page" button to pages. If `true`, repository information in repository: must be filled in
use_repository_button : True # Whether to add a link to your repository button
use_issues_button : True # Whether to add an "open an issue" button
home_page_in_navbar : true # Whether to include your home page in the left Navigation Bar
baseurl : "https://fairplus.github.io/the-fair-cookbook" # The base URL where your book will be hosted. Used for creating image previews and social links. e.g.: https://mypage.com/mybook/
extra_navbar : Powered by <a href="https://jupyterbook.org">Jupyter Book</a> # Will be displayed underneath the left navbar.
extra_footer : # Will be displayed underneath the footer.
<script>mermaid.init();</script>
<div class="container-lg mt-3">
<div class="row">
<div class="col-xl-3">
<div class="footerImages">
<a href="https://europa.eu/"><img src="../../../_static/images/logo/eu-flag.svg" height="20" alt="EU flag" style="float:center""></a>
<a href="https://www.imi.europa.eu/"><img src="../../../_static/images/logo/imi-logo.svg" height="20" alt="IMI logo" style="float:center""></a>
<a href="https://efpia.eu"><img src="../../../_static/images/logo/efpia-logo.svg" height="20" alt="EFPIA logo" style="float:center""></a>
</div>
<div class="mb-3"> Grant agreement 802750 </div>
</div>
<div class="col-xl-6 d-flex">
<div class="container">
<div class="row">
<div class="col-6 d-flex" style="justify-content:center">
<ul>
<li><a href="mailto:[email protected]"> Contact us </a></li>
<li><a href="https://fairplus-project.eu" target="_blank"> FAIRplus </a> </li>
</ul>
</div>
<div class="col-6 d-flex" style="justify-content:center">
<ul>
<li> <a href="https://faircookbook.elixir-europe.org/content/recipes/boilerplate/people.html "> Contributors </a> </li> </li>
<li> <a href="https://faircookbook.elixir-europe.org/content/recipes/help.html"> How to contribute </a> </li>
</ul>
</div>
</div>
</div>
</div>
<div class="col-xl-3">
<a href="https://elixir-europe.org/" target="_blank"><img src="../../../_static/images/logo/Elixir/ELIXIR.png" height="50" alt="Elixir logo" style="float:center""></a>
<a href="https://fairplus-project.eu/"><img src="https://fairplus-project.eu/images/fairplus-logo.png" alt="FAIRplus logo" style="background:white;padding:5px;height:33px;"></a>
</div>
</div>
</div>
<div class="row_footer my-3">
The FAIR Cookbook is licensed under the <a href="https://creativecommons.org/licenses/by/4.0/" target="_blank">Creative Commons Attribution 4.0 International</a> (CC BY 4.0) license.
</div>
google_analytics_id : "UA-171697285-1" # A GA id that can be used to track book views.
comments:
hypothesis: false
# utterances:
# repo: "FAIRplus/the-fair-cookbook"
#######################################################################################
# Launch button settings
launch_buttons:
notebook_interface : "jupyterlab" # The interface interactive links will activate ["classic", "jupyterlab"]
binderhub_url : "https://mybinder.org" # The URL of the BinderHub (e.g., https://mybinder.org)
jupyterhub_url : "" # The URL of the JupyterHub (e.g., https://datahub.berkeley.edu)
thebelab : false # Add a thebelab button to pages (requires the repository to run on Binder)
colab_url : "https://colab.research.google.com"
repository:
url : https://github.com/FAIRplus/the-fair-cookbook # The URL to your book's repository
path_to_book : "" # A path to your book's folder, relative to the repository root.
branch : migrating # Which branch of the repository should be used when creating links
#######################################################################################
# Advanced and power-user settings
# sphinx:
# config:
# html_baseurl: 'https://path_to_book/'
# extra_extensions:
# - sphinx_sitemap
sphinx:
# - sphinx_tabs.tabs
config : # key-value pairs to directly over-ride the Sphinx configuration
html_extra_path : ["_inject_after_build"]
html_baseurl : 'https://fairplus.github.io/the-fair-cookbook'
# html_theme_options: {
# "search_bar_text": "Search for FAIR recipes (^_^) "
# }
extra_extensions: # A list of extra extensions to load by Sphinx.
- sphinx_sitemap
local_extensions:
authors_fairplus: _ext/
figure_fairplus: _ext/
license_fairplus: _ext/
panels_fairplus: _ext/
parse:
myst_url_schemes: [ mailto, http, https, ftp ]
bibtex_bibfiles:
- ./_bibliography/bibliography-faircookbook.bib
bibtex_reference_style: author_year