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assembly tutorial: check fasta vs graph contigs #6

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AnnaSyme opened this issue Jan 9, 2020 · 1 comment

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AnnaSyme commented Jan 9, 2020

Flye assembly: chloroplast sweet potato

Contig sizes are different in the assembly.fasta and the assembly.gfa (viewed in Bandage).

Contigs in the graph are smaller. e.g. contig3 in the gfa vs contig3 in the fasta

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AnnaSyme commented Jan 9, 2020

in discussion mikolmogorov/Flye#202

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