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Outline of approach #1

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djinnome opened this issue May 1, 2024 · 0 comments

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djinnome commented May 1, 2024 •

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compute FVA on reference condition.
Use enzyme activity data to modify the bounds for non-reference conditions
Use external flux measurements to modify the bounds for the non-reference external fluxes
run E-flux with slack variables to compute the condition-specific flux distribution.
Create a triangular distribution where

lower = lower - slack
upper = upper + slack
center = E-flux flux

djinnome self-assigned this

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1 outline of approach #4

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djinnome removed a link to a pull request

1 outline of approach #4

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