From 0a3b04702a32a92aa41482fda0476e2823d3468d Mon Sep 17 00:00:00 2001 From: Val Wood Date: Mon, 9 Dec 2024 12:30:10 +0000 Subject: [PATCH] Update issue templates --- .../ISSUE_TEMPLATE/browser-data-hosting.md | 42 +++++++++---------- 1 file changed, 21 insertions(+), 21 deletions(-) diff --git a/.github/ISSUE_TEMPLATE/browser-data-hosting.md b/.github/ISSUE_TEMPLATE/browser-data-hosting.md index a58820ad..c7df5580 100644 --- a/.github/ISSUE_TEMPLATE/browser-data-hosting.md +++ b/.github/ISSUE_TEMPLATE/browser-data-hosting.md @@ -7,24 +7,24 @@ assignees: PCarme --- -| Column | Contents | Example | Mandatory? | Multiple entries allowed? | -|----------|---------------------------------------------------------------------------------------------|-----------------------------------------------------------------------------------------|------------|---------------------------| -| 1 (A) | Data type | Transcripts, Chromatin binding, Nucleosome positioning, Poly(A) sites, Replication origins | Yes | No | -| 2 (B) | Track label | See below for format and examples*** | Yes | No | -| 3 (C) | Assayed gene product | Fkh2 | No (only for chromatin binding data) | No | -| 4 (D) | Strain background | h- cdc25-22, leu1-1 | Yes | Yes | -| 5 (E) | WT or mutant (strains with only background mutations are considered WT) | WT | Yes | No | -| 6 (F) | Mutant alleles | clr4delta, dfp1-3A | No | Yes | -| 7 (G) | Conditions | YES, high temperature; glucose MM, standard temperature + HU | No | No | -| 8 (H) | Comment | Free-text field for additional information | No | Yes | -| 9 (I) | Growth phase or response | Vegetative growth, meiosis, quiescence, glucose starvation, oxidative stress, heat shock | Yes | Yes (if the track combines data) | -| 10 (J) | Strand | Forward, reverse | No | No | -| 11 (K) | Assay type | Tiling microarray, RNA-seq, HT sequencing | Yes | No | -| 12 (L) | First author (surname) | Soriano | Yes | No | -| 13 (M) | Publication year | 2020 | Yes | No | -| 14 (N) | PubMed ID | 31077324 | Yes | No | -| 15 (O) | Database | GEO, ArrayExpress | No (required for data in public repositories) | No | -| 16 (P) | Study ID | GSE110976, PRJEB7403 | No (required if Database has an entry) | No | -| 17 (Q) | Sample ID | GSM3019628, ERS555567 | No | Yes | -| 18 (R) | Data file type | bigwig, bed | Yes | No | -| 19 (S) | File name | Name given to submitted data file relevant to the track | Yes | No | +| Column | Contents | | Example | Mandatory? | Multiple entries allowed? | +|----------|---------------------------------------------------------------------------------------------|-----------|-----------------------------------------------------------------------------------------|------------|---------------------------| +| 1 (A) | Data type | | Transcripts, Chromatin binding, Nucleosome positioning, Poly(A) sites, Replication origins | Yes | No | +| 2 (B) | Track label | | See below for format and examples*** | Yes | No | +| 3 (C) | Assayed gene product | | Fkh2 | No (only for chromatin binding data) | No | +| 4 (D) | Strain background | | h- cdc25-22, leu1-1 | Yes | Yes | +| 5 (E) | WT or mutant (strains with only background mutations are considered WT) | | WT | Yes | No | +| 6 (F) | Mutant alleles | | clr4delta, dfp1-3A | No | Yes | +| 7 (G) | Conditions | | YES, high temperature; glucose MM, standard temperature + HU | No | No | +| 8 (H) | Comment | | Free-text field for additional information | No | Yes | +| 9 (I) | Growth phase or response | | Vegetative growth, meiosis, quiescence, glucose starvation, oxidative stress, heat shock | Yes | Yes (if the track combines data) | +| 10 (J) | Strand | | Forward, reverse | No | No | +| 11 (K) | Assay type | | Tiling microarray, RNA-seq, HT sequencing | Yes | No | +| 12 (L) | First author (surname) | | Soriano | Yes | No | +| 13 (M) | Publication year | | 2020 | Yes | No | +| 14 (N) | PubMed ID | | 31077324 | Yes | No | +| 15 (O) | Database | | GEO, ArrayExpress | No (required for data in public repositories) | No | +| 16 (P) | Study ID | | GSE110976, PRJEB7403 | No (required if Database has an entry) | No | +| 17 (Q) | Sample ID | | GSM3019628, ERS555567 | No | Yes | +| 18 (R) | Data file type | | bigwig, bed | Yes | No | +| 19 (S) | File name | | Name given to submitted data file relevant to the track | Yes | No |