From d62488b08efa632f6be66c2e8b2d2bbfb97db1a4 Mon Sep 17 00:00:00 2001
From: EleniSef <118529890+EleniSef@users.noreply.github.com>
Date: Thu, 15 Aug 2024 12:50:40 +0200
Subject: [PATCH 1/2] Create 2021_Silva_SciRep.janno

---
 2021_Silva_SciRep/2021_Silva_SciRep.janno | 2 ++
 1 file changed, 2 insertions(+)
 create mode 100644 2021_Silva_SciRep/2021_Silva_SciRep.janno

diff --git a/2021_Silva_SciRep/2021_Silva_SciRep.janno b/2021_Silva_SciRep/2021_Silva_SciRep.janno
new file mode 100644
index 00000000..78d0c1d3
--- /dev/null
+++ b/2021_Silva_SciRep/2021_Silva_SciRep.janno
@@ -0,0 +1,2 @@
+Poseidon_ID	Genetic_Sex	Group_Name	Alternative_IDs	Relation_To	Relation_Degree	Relation_Type	Relation_Note	Collection_ID	Country	Country_ISO	Location	Site	Latitude	Longitude	Date_Type	Date_C14_Labnr	Date_C14_Uncal_BP	Date_C14_Uncal_BP_Err	Date_BC_AD_Start	Date_BC_AD_Median	Date_BC_AD_Stop	Date_Note	MT_Haplogroup	Y_Haplogroup	Source_Tissue	Nr_Libraries	Library_Names	Capture_Type	UDG	Library_Built	Genotype_Ploidy	Data_Preparation_Pipeline_URL	Endogenous	Nr_SNPs	Coverage_on_Target_SNPs	Damage	Contamination	Contamination_Err	Contamination_Meas	Contamination_Note	Genetic_Source_Accession_IDs	Primary_Contact	Publication	Note	Keywords
+UE2298/MS060	M	Segorbe_Giant						UE2298	Spain		Segorbe_Valencia	Plaza_del_Almudin	3.985.238	-0.48836	contextual				1000	1050	1100	contextual	U6a1a1a	E1b1b1b1	tooth_molar	4	M38;M38-1;M38-2;M38-3	Shotgun	mixed	ds	haploid				74209		0.037142	3.75E-02	ANGSD			MarinaSilva	SilvaSciRep2021		

From 6f6b5aef12dd1f6ff9b7f9c2fde06fd7eb264ae4 Mon Sep 17 00:00:00 2001
From: EleniSef <118529890+EleniSef@users.noreply.github.com>
Date: Mon, 19 Aug 2024 10:04:43 +0200
Subject: [PATCH 2/2] Update and rename 2021_Silva_SciRep.janno to
 2021_Silva_AlAndalus.janno

---
 .../{2021_Silva_SciRep.janno => 2021_Silva_AlAndalus.janno}     | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)
 rename 2021_Silva_SciRep/{2021_Silva_SciRep.janno => 2021_Silva_AlAndalus.janno} (75%)

diff --git a/2021_Silva_SciRep/2021_Silva_SciRep.janno b/2021_Silva_SciRep/2021_Silva_AlAndalus.janno
similarity index 75%
rename from 2021_Silva_SciRep/2021_Silva_SciRep.janno
rename to 2021_Silva_SciRep/2021_Silva_AlAndalus.janno
index 78d0c1d3..c56cebd9 100644
--- a/2021_Silva_SciRep/2021_Silva_SciRep.janno
+++ b/2021_Silva_SciRep/2021_Silva_AlAndalus.janno
@@ -1,2 +1,2 @@
 Poseidon_ID	Genetic_Sex	Group_Name	Alternative_IDs	Relation_To	Relation_Degree	Relation_Type	Relation_Note	Collection_ID	Country	Country_ISO	Location	Site	Latitude	Longitude	Date_Type	Date_C14_Labnr	Date_C14_Uncal_BP	Date_C14_Uncal_BP_Err	Date_BC_AD_Start	Date_BC_AD_Median	Date_BC_AD_Stop	Date_Note	MT_Haplogroup	Y_Haplogroup	Source_Tissue	Nr_Libraries	Library_Names	Capture_Type	UDG	Library_Built	Genotype_Ploidy	Data_Preparation_Pipeline_URL	Endogenous	Nr_SNPs	Coverage_on_Target_SNPs	Damage	Contamination	Contamination_Err	Contamination_Meas	Contamination_Note	Genetic_Source_Accession_IDs	Primary_Contact	Publication	Note	Keywords
-UE2298/MS060	M	Segorbe_Giant						UE2298	Spain		Segorbe_Valencia	Plaza_del_Almudin	3.985.238	-0.48836	contextual				1000	1050	1100	contextual	U6a1a1a	E1b1b1b1	tooth_molar	4	M38;M38-1;M38-2;M38-3	Shotgun	mixed	ds	haploid				74209		0.037142	3.75E-02	ANGSD			MarinaSilva	SilvaSciRep2021		
+UE2298/MS060	M	Segorbe_Giant						UE2298	Spain		Segorbe_Valencia	Plaza_del_Almudin	39.85284	-0.48836	contextual				1000	1050	1100	contextual	U6a1a1a	E1b1b1b1	tooth_molar	4	M38;M38-1;M38-2;M38-3	Shotgun	mixed	ds	haploid				74209		0.037142	3.75E-02	ANGSD			MarinaSilva	SilvaSciRep2021