From 22bafeab72f5bbaeddc749e34a54ea135b563d7b Mon Sep 17 00:00:00 2001 From: danimfernandes Date: Wed, 21 Feb 2024 13:49:10 +0000 Subject: [PATCH 01/17] Create Olalde_Cell_Roman_2024.ssf --- .../Olalde_Cell_Roman_2024.ssf | 140 ++++++++++++++++++ 1 file changed, 140 insertions(+) create mode 100644 packages/2024_OlaldeCarrion_Roma/Olalde_Cell_Roman_2024.ssf diff --git a/packages/2024_OlaldeCarrion_Roma/Olalde_Cell_Roman_2024.ssf b/packages/2024_OlaldeCarrion_Roma/Olalde_Cell_Roman_2024.ssf new file mode 100644 index 0000000..0fa5a3e --- /dev/null +++ b/packages/2024_OlaldeCarrion_Roma/Olalde_Cell_Roman_2024.ssf @@ -0,0 +1,140 @@ +poseidon_IDs udg library_built sample_accession study_accession run_accession sample_alias secondary_sample_accession first_public last_updated instrument_model library_layout library_source instrument_platform library_name library_strategy fastq_ftp fastq_aspera fastq_bytes fastq_md5 read_count submitted_ftp +I1116 half ds SAMEA114441087 PRJEB66422 ERR12121073 I1116 ERS16428871 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I1116 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/073/ERR12121073/ERR12121073.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/073/ERR12121073/ERR12121073.fastq.gz 5018568227 232c2d2e7aa77683fd149c354a952dc3 109682971 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121073/I1116.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121073/I1116.1240k.bam.bai +I12991 half ds SAMEA114441096 PRJEB66422 ERR12121075 I12991 ERS16428880 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I12991 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/075/ERR12121075/ERR12121075.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/075/ERR12121075/ERR12121075.fastq.gz 383352878 68aa9f16454daca8fab8713a3649a459 11175210 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121075/I12991.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121075/I12991.1240k.bam.bai +I13458 half ds SAMEA114441097 PRJEB66422 ERR12121077 I13458 ERS16428881 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I13458 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/077/ERR12121077/ERR12121077.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/077/ERR12121077/ERR12121077.fastq.gz 491508492 0bd78de6a5b34e765042160b7756b4b8 16599256 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121077/I13458.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121077/I13458.1240k.bam.bai +I15232 half ds SAMEA114441098 PRJEB66422 ERR12121079 I15232 ERS16428882 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15232 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/079/ERR12121079/ERR12121079.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/079/ERR12121079/ERR12121079.fastq.gz 493806220 e72e33b7a9bab2be33bb19cd3a5ff083 15497958 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121079/I15232.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121079/I15232.1240k.bam.bai +I15485 half ds SAMEA114440974 PRJEB66422 ERR12121081 I15485 ERS16428758 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15485 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/081/ERR12121081/ERR12121081.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/081/ERR12121081/ERR12121081.fastq.gz 6183497 caf54ab824305825628969d67df1827b 251211 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121081/I15485.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121081/I15485.1240k.bam.bai +I15486 half ds SAMEA114440987 PRJEB66422 ERR12121083 I15486 ERS16428771 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15486 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/083/ERR12121083/ERR12121083.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/083/ERR12121083/ERR12121083.fastq.gz 80310157 33b88244404286a1ae30257999479d8a 2147417 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121083/I15486.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121083/I15486.1240k.bam.bai +I15487 half ds SAMEA114441001 PRJEB66422 ERR12121085 I15487 ERS16428785 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15487 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/085/ERR12121085/ERR12121085.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/085/ERR12121085/ERR12121085.fastq.gz 16598966 2fc82a8f62a00e9becc7ae37a3904623 505869 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121085/I15487.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121085/I15487.1240k.bam.bai +I15488 half ds SAMEA114441002 PRJEB66422 ERR12121087 I15488 ERS16428786 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15488 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/087/ERR12121087/ERR12121087.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/087/ERR12121087/ERR12121087.fastq.gz 144282033 4fbb48f409aacdc183e5a99cb73c854c 3845406 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121087/I15488.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121087/I15488.1240k.bam.bai +I15489 half ds SAMEA114441003 PRJEB66422 ERR12121089 I15489 ERS16428787 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15489 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/089/ERR12121089/ERR12121089.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/089/ERR12121089/ERR12121089.fastq.gz 89549566 08709ec7c0064329fbf05ff33ddd8ec9 2483784 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121089/I15489.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121089/I15489.1240k.bam.bai +I15490 half ds SAMEA114440988 PRJEB66422 ERR12121091 I15490 ERS16428772 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15490 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/091/ERR12121091/ERR12121091.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/091/ERR12121091/ERR12121091.fastq.gz 61121829 48287f5f0337cf98a2aa8a4e0fc29897 1693576 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121091/I15490.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121091/I15490.1240k.bam.bai +I15491 half ds SAMEA114440989 PRJEB66422 ERR12121093 I15491 ERS16428773 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15491 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/093/ERR12121093/ERR12121093.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/093/ERR12121093/ERR12121093.fastq.gz 17569346 0cc9eaec2b1828fe0250d1dba0270791 678052 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121093/I15491.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121093/I15491.1240k.bam.bai +I15492 half ds SAMEA114440990 PRJEB66422 ERR12121095 I15492 ERS16428774 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15492 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/095/ERR12121095/ERR12121095.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/095/ERR12121095/ERR12121095.fastq.gz 146142753 7d7e08ea08ff7097e723027d75997150 4022397 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121095/I15492.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121095/I15492.1240k.bam.bai +I15493 half ds SAMEA114440970 PRJEB66422 ERR12121097 I15493 ERS16428754 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15493 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/097/ERR12121097/ERR12121097.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/097/ERR12121097/ERR12121097.fastq.gz 6144867 ea439276c3546d9ab1d63571e4bbb0e4 269516 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121097/I15493.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121097/I15493.1240k.bam.bai +I15494 half ds SAMEA114440991 PRJEB66422 ERR12121099 I15494 ERS16428775 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15494 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/099/ERR12121099/ERR12121099.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/099/ERR12121099/ERR12121099.fastq.gz 50866460 dd5f25b71e12927a1f89f79f5874cfda 1729831 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121099/I15494.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121099/I15494.1240k.bam.bai +I15495 half ds SAMEA114440992 PRJEB66422 ERR12121101 I15495 ERS16428776 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15495 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/001/ERR12121101/ERR12121101.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/001/ERR12121101/ERR12121101.fastq.gz 80958683 a86f3703d9e99c49d3ad2b420dadbd5a 2249283 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121101/I15495.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121101/I15495.1240k.bam.bai +I15496 half ds SAMEA114441101 PRJEB66422 ERR12121103 I15496 ERS16428885 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15496 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/003/ERR12121103/ERR12121103.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/003/ERR12121103/ERR12121103.fastq.gz 18133948 fbdbb381423053a379cfa91759b69567 616117 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121103/I15496.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121103/I15496.1240k.bam.bai +I15497 half ds SAMEA114440975 PRJEB66422 ERR12121105 I15497 ERS16428759 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15497 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/005/ERR12121105/ERR12121105.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/005/ERR12121105/ERR12121105.fastq.gz 8661102 094ad3f6cf04a14a9ec056eeac435173 395422 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121105/I15497.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121105/I15497.1240k.bam.bai +I15498 half ds SAMEA114440971 PRJEB66422 ERR12121107 I15498 ERS16428755 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15498 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/007/ERR12121107/ERR12121107.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/007/ERR12121107/ERR12121107.fastq.gz 9298873 a59177758be3eca45e1570cc176c9c8b 394713 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121107/I15498.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121107/I15498.1240k.bam.bai +I15499 half ds SAMEA114440993 PRJEB66422 ERR12121109 I15499 ERS16428777 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15499 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/009/ERR12121109/ERR12121109.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/009/ERR12121109/ERR12121109.fastq.gz 16200386 6d52597b2ddcc5f870cc08924a39a8db 566785 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121109/I15499.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121109/I15499.1240k.bam.bai +I15500 half ds SAMEA114441004 PRJEB66422 ERR12121111 I15500 ERS16428788 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15500 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/011/ERR12121111/ERR12121111.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/011/ERR12121111/ERR12121111.fastq.gz 26060979 d253756115c38fadfadf675c962b32bb 835520 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121111/I15500.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121111/I15500.1240k.bam.bai +I15501 half ds SAMEA114440972 PRJEB66422 ERR12121113 I15501 ERS16428756 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15501 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/013/ERR12121113/ERR12121113.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/013/ERR12121113/ERR12121113.fastq.gz 6362964 27cc8038d62b76662d6bb0027307699f 231300 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121113/I15501.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121113/I15501.1240k.bam.bai +I15502 half ds SAMEA114440994 PRJEB66422 ERR12121115 I15502 ERS16428778 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15502 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/015/ERR12121115/ERR12121115.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/015/ERR12121115/ERR12121115.fastq.gz 38829166 54e76de521138ca09e9f2d42df5d3c96 1127317 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121115/I15502.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121115/I15502.1240k.bam.bai +I15503 half ds SAMEA114441102 PRJEB66422 ERR12121117 I15503 ERS16428886 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15503 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/017/ERR12121117/ERR12121117.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/017/ERR12121117/ERR12121117.fastq.gz 16596571 6ebacf13db7814eb876f16f11fbfd915 586204 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121117/I15503.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121117/I15503.1240k.bam.bai +I15504 half ds SAMEA114441005 PRJEB66422 ERR12121119 I15504 ERS16428789 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15504 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/019/ERR12121119/ERR12121119.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/019/ERR12121119/ERR12121119.fastq.gz 168870714 fa13ec49f7b9745fed314d76146ce811 4399363 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121119/I15504.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121119/I15504.1240k.bam.bai +I15505 half ds SAMEA114440976 PRJEB66422 ERR12121121 I15505 ERS16428760 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15505 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/021/ERR12121121/ERR12121121.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/021/ERR12121121/ERR12121121.fastq.gz 5725112 9af78de9d8f57f1823b2c4bb3e9cede2 243955 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121121/I15505.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121121/I15505.1240k.bam.bai +I15507 half ds SAMEA114441006 PRJEB66422 ERR12121124 I15507 ERS16428790 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15507 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/024/ERR12121124/ERR12121124.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/024/ERR12121124/ERR12121124.fastq.gz 80915185 1af1e54e955b725e8551b78b535caea2 2230991 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121124/I15507.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121124/I15507.1240k.bam.bai +I15508 half ds SAMEA114441007 PRJEB66422 ERR12121126 I15508 ERS16428791 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15508 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/026/ERR12121126/ERR12121126.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/026/ERR12121126/ERR12121126.fastq.gz 127807973 703f459be9ee8f1994a3df055b3c9316 3081498 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121126/I15508.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121126/I15508.1240k.bam.bai +I15509 half ds SAMEA114440995 PRJEB66422 ERR12121128 I15509 ERS16428779 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15509 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/028/ERR12121128/ERR12121128.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/028/ERR12121128/ERR12121128.fastq.gz 19310903 d216634bdd0f9624e0bc14241910a27c 639048 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121128/I15509.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121128/I15509.1240k.bam.bai +I15510 half ds SAMEA114440996 PRJEB66422 ERR12121130 I15510 ERS16428780 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15510 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/030/ERR12121130/ERR12121130.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/030/ERR12121130/ERR12121130.fastq.gz 169160429 cafb5bf635b2fcefcb7869c652452d1b 5692560 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121130/I15510.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121130/I15510.1240k.bam.bai +I15511 half ds SAMEA114441100 PRJEB66422 ERR12121132 I15511 ERS16428884 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15511 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/032/ERR12121132/ERR12121132.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/032/ERR12121132/ERR12121132.fastq.gz 16590081 55777b74becd229c849b276cb7f7c29c 679006 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121132/I15511.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121132/I15511.1240k.bam.bai +I15512 half ds SAMEA114440973 PRJEB66422 ERR12121134 I15512 ERS16428757 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15512 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/034/ERR12121134/ERR12121134.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/034/ERR12121134/ERR12121134.fastq.gz 7935269 bdc1d07f49e34b2eec67c75eb3a6069f 332146 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121134/I15512.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121134/I15512.1240k.bam.bai +I15513 half ds SAMEA114441008 PRJEB66422 ERR12121136 I15513 ERS16428792 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15513 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/036/ERR12121136/ERR12121136.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/036/ERR12121136/ERR12121136.fastq.gz 103287507 4c46939e90bb321eb4111b799ba5833c 2733636 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121136/I15513.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121136/I15513.1240k.bam.bai +I15514 half ds SAMEA114440997 PRJEB66422 ERR12121138 I15514 ERS16428781 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15514 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/038/ERR12121138/ERR12121138.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/038/ERR12121138/ERR12121138.fastq.gz 42452315 fd04fdf968152665227217edfcea2355 1199938 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121138/I15514.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121138/I15514.1240k.bam.bai +I15515 half ds SAMEA114440998 PRJEB66422 ERR12121140 I15515 ERS16428782 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15515 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/040/ERR12121140/ERR12121140.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/040/ERR12121140/ERR12121140.fastq.gz 22570000 bc7a5e3814fc9b073bd8db305b534103 702819 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121140/I15515.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121140/I15515.1240k.bam.bai +I15516 half ds SAMEA114440999 PRJEB66422 ERR12121142 I15516 ERS16428783 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15516 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/042/ERR12121142/ERR12121142.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/042/ERR12121142/ERR12121142.fastq.gz 45328802 11eeaff3784411fea7ae1fb2af594e79 1156850 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121142/I15516.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121142/I15516.1240k.bam.bai +I15517 half ds SAMEA114441000 PRJEB66422 ERR12121144 I15517 ERS16428784 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15517 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/044/ERR12121144/ERR12121144.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/044/ERR12121144/ERR12121144.fastq.gz 41442038 2fb3ed9306dab681f1aea0719d1041ec 1468019 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121144/I15517.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121144/I15517.1240k.bam.bai +I15518 half ds SAMEA114441009 PRJEB66422 ERR12121146 I15518 ERS16428793 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15518 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/046/ERR12121146/ERR12121146.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/046/ERR12121146/ERR12121146.fastq.gz 66821402 0481fa4fbf078dd2347eb571fb0dc22f 1884471 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121146/I15518.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121146/I15518.1240k.bam.bai +I15519 half ds SAMEA114440977 PRJEB66422 ERR12121148 I15519 ERS16428761 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15519 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/048/ERR12121148/ERR12121148.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/048/ERR12121148/ERR12121148.fastq.gz 7354728 a981dab7535570ffb6b5171f86b1c19e 331575 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121148/I15519.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121148/I15519.1240k.bam.bai +I15520 half ds SAMEA114441010 PRJEB66422 ERR12121150 I15520 ERS16428794 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15520 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/050/ERR12121150/ERR12121150.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/050/ERR12121150/ERR12121150.fastq.gz 149690254 d80ae2c3eac90590722656bd53972758 3901934 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121150/I15520.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121150/I15520.1240k.bam.bai +I15521 half ds SAMEA114441011 PRJEB66422 ERR12121152 I15521 ERS16428795 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15521 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/052/ERR12121152/ERR12121152.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/052/ERR12121152/ERR12121152.fastq.gz 73394212 5fd57013f21aeafd96459982112c5876 2020832 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121152/I15521.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121152/I15521.1240k.bam.bai +I15522 half ds SAMEA114441012 PRJEB66422 ERR12121154 I15522 ERS16428796 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15522 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/054/ERR12121154/ERR12121154.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/054/ERR12121154/ERR12121154.fastq.gz 76526859 ac57ca49fb0f39d2eff9588bfdfbea79 2137058 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121154/I15522.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121154/I15522.1240k.bam.bai +I15523 half ds SAMEA114441103 PRJEB66422 ERR12121156 I15523 ERS16428887 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15523 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/056/ERR12121156/ERR12121156.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/056/ERR12121156/ERR12121156.fastq.gz 11595349 cfc67d81d8bb61af518aef616461f1d6 434046 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121156/I15523.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121156/I15523.1240k.bam.bai +I15524 half ds SAMEA114441013 PRJEB66422 ERR12121158 I15524 ERS16428797 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15524 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/058/ERR12121158/ERR12121158.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/058/ERR12121158/ERR12121158.fastq.gz 51335241 54d9b2215442a82bf295743ba87713a1 1434938 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121158/I15524.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121158/I15524.1240k.bam.bai +I15525 half ds SAMEA114441014 PRJEB66422 ERR12121160 I15525 ERS16428798 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15525 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/060/ERR12121160/ERR12121160.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/060/ERR12121160/ERR12121160.fastq.gz 83182092 a28abfd37e4a32d5fbe354b2149b02c4 2155461 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121160/I15525.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121160/I15525.1240k.bam.bai +I15526 half ds SAMEA114441015 PRJEB66422 ERR12121162 I15526 ERS16428799 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15526 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/062/ERR12121162/ERR12121162.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/062/ERR12121162/ERR12121162.fastq.gz 52922457 49b2d69f27a19a72d513c7af27241c1b 1319344 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121162/I15526.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121162/I15526.1240k.bam.bai +I15527 half ds SAMEA114440979 PRJEB66422 ERR12121164 I15527 ERS16428763 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15527 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/064/ERR12121164/ERR12121164.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/064/ERR12121164/ERR12121164.fastq.gz 184998381 35ebdb45c50baf2851ab236be97bed29 5128531 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121164/I15527.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121164/I15527.1240k.bam.bai +I15528 half ds SAMEA114440980 PRJEB66422 ERR12121166 I15528 ERS16428764 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15528 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/066/ERR12121166/ERR12121166.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/066/ERR12121166/ERR12121166.fastq.gz 75920477 011f9006f545b770566535c4fa0b1357 2058556 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121166/I15528.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121166/I15528.1240k.bam.bai +I15529 half ds SAMEA114440981 PRJEB66422 ERR12121168 I15529 ERS16428765 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15529 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/068/ERR12121168/ERR12121168.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/068/ERR12121168/ERR12121168.fastq.gz 98505828 7e6323c037a215f0eebbe041cf908937 2995282 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121168/I15529.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121168/I15529.1240k.bam.bai +I15530 half ds SAMEA114440968 PRJEB66422 ERR12121170 I15530 ERS16428752 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15530 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/070/ERR12121170/ERR12121170.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/070/ERR12121170/ERR12121170.fastq.gz 8394992 f45f43742e9380bd83ed850872dd221a 348300 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121170/I15530.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121170/I15530.1240k.bam.bai +I15531 half ds SAMEA114440982 PRJEB66422 ERR12121172 I15531 ERS16428766 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15531 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/072/ERR12121172/ERR12121172.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/072/ERR12121172/ERR12121172.fastq.gz 77561209 4265bf3f4b2c14162b4f4097e19f1e74 2531481 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121172/I15531.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121172/I15531.1240k.bam.bai +I15532 half ds SAMEA114440983 PRJEB66422 ERR12121174 I15532 ERS16428767 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15532 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/074/ERR12121174/ERR12121174.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/074/ERR12121174/ERR12121174.fastq.gz 53575918 20209901c0712037350d73eeb02cc312 1967194 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121174/I15532.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121174/I15532.1240k.bam.bai +I15533 half ds SAMEA114440984 PRJEB66422 ERR12121176 I15533 ERS16428768 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15533 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/076/ERR12121176/ERR12121176.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/076/ERR12121176/ERR12121176.fastq.gz 48987908 e41c2da976d39d2033b1b9531276c0bf 1400567 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121176/I15533.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121176/I15533.1240k.bam.bai +I15534 half ds SAMEA114440985 PRJEB66422 ERR12121178 I15534 ERS16428769 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15534 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/078/ERR12121178/ERR12121178.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/078/ERR12121178/ERR12121178.fastq.gz 21807100 011555a67d35187f67e17d6299d18876 691304 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121178/I15534.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121178/I15534.1240k.bam.bai +I15535 half ds SAMEA114440986 PRJEB66422 ERR12121180 I15535 ERS16428770 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15535 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/080/ERR12121180/ERR12121180.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/080/ERR12121180/ERR12121180.fastq.gz 35923023 abe6759a10a8f14cef46311cccddeb90 1118308 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121180/I15535.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121180/I15535.1240k.bam.bai +I15536 half ds SAMEA114440969 PRJEB66422 ERR12121182 I15536 ERS16428753 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15536 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/082/ERR12121182/ERR12121182.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/082/ERR12121182/ERR12121182.fastq.gz 7012932 ae08f29e2c23a4f424b02021e299739f 291539 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121182/I15536.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121182/I15536.1240k.bam.bai +I15537 half ds SAMEA114441031 PRJEB66422 ERR12121184 I15537 ERS16428815 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15537 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/084/ERR12121184/ERR12121184.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/084/ERR12121184/ERR12121184.fastq.gz 113089012 d70f05f3510bbbef050102c27300561c 3639751 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121184/I15537.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121184/I15537.1240k.bam.bai +I15538 half ds SAMEA114441032 PRJEB66422 ERR12121186 I15538 ERS16428816 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15538_1240k OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/086/ERR12121186/ERR12121186.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/086/ERR12121186/ERR12121186.fastq.gz 16630624 9cb7a4e6fea14be674bd27b0a48aacb5 544337 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121186/I15538_1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121186/I15538_1240k.bam.bai +I15539 half ds SAMEA114498459 PRJEB66422 ERR12121189 I15539 ERS16480113 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15539_1240k OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/089/ERR12121189/ERR12121189.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/089/ERR12121189/ERR12121189.fastq.gz 120237080 6b714d3ee8ca4211153f5e88458921fb 3883344 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121189/I15539_1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121189/I15539_1240k.bam.bai +I15540 half ds SAMEA114441033 PRJEB66422 ERR12121192 I15540 ERS16428817 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15540 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/092/ERR12121192/ERR12121192.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/092/ERR12121192/ERR12121192.fastq.gz 168810388 705bb75891a1fb95323048655539d66b 4788589 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121192/I15540.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121192/I15540.1240k.bam.bai +I15541 half ds SAMEA114441034 PRJEB66422 ERR12121194 I15541 ERS16428818 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15541 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/094/ERR12121194/ERR12121194.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/094/ERR12121194/ERR12121194.fastq.gz 104374112 4a59d6c34398d750f74dbe9a4d1b1899 3045126 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121194/I15541.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121194/I15541.1240k.bam.bai +I15542 half ds SAMEA114441035 PRJEB66422 ERR12121196 I15542 ERS16428819 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15542 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/096/ERR12121196/ERR12121196.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/096/ERR12121196/ERR12121196.fastq.gz 135002922 df0ffc79f1390736b411a43e7daacc66 3597760 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121196/I15542.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121196/I15542.1240k.bam.bai +I15543 half ds SAMEA114441036 PRJEB66422 ERR12121198 I15543 ERS16428820 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15543 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/098/ERR12121198/ERR12121198.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/098/ERR12121198/ERR12121198.fastq.gz 202391775 a6935768dba6b139655a2bb6b1006251 6683794 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121198/I15543.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121198/I15543.1240k.bam.bai +I15544 half ds SAMEA114441021 PRJEB66422 ERR12121200 I15544 ERS16428805 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15544 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/000/ERR12121200/ERR12121200.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/000/ERR12121200/ERR12121200.fastq.gz 123113214 b7acb69846f23a6779d7ec70d66f39cf 3440970 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121200/I15544.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121200/I15544.1240k.bam.bai +I15545 half ds SAMEA114441022 PRJEB66422 ERR12121202 I15545 ERS16428806 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15545 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/002/ERR12121202/ERR12121202.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/002/ERR12121202/ERR12121202.fastq.gz 179643294 1f3d5f492b2883535fe38bec09e493ec 5148383 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121202/I15545.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121202/I15545.1240k.bam.bai +I15546 half ds SAMEA114441023 PRJEB66422 ERR12121204 I15546 ERS16428807 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15546 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/004/ERR12121204/ERR12121204.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/004/ERR12121204/ERR12121204.fastq.gz 87723856 4962eca3c4c357d6ec5d3d3d433a0738 2770074 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121204/I15546.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121204/I15546.1240k.bam.bai +I15547 half ds SAMEA114441024 PRJEB66422 ERR12121206 I15547 ERS16428808 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15547 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/006/ERR12121206/ERR12121206.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/006/ERR12121206/ERR12121206.fastq.gz 25231800 ef01b52a9f1e2f2e23db2d3a25dbcbc7 1010760 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121206/I15547.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121206/I15547.1240k.bam.bai +I15548 half ds SAMEA114441025 PRJEB66422 ERR12121208 I15548 ERS16428809 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15548 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/008/ERR12121208/ERR12121208.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/008/ERR12121208/ERR12121208.fastq.gz 113852679 5b30930b01de746ed8d7ce0baa208189 3066977 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121208/I15548.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121208/I15548.1240k.bam.bai +I15549 half ds SAMEA114441037 PRJEB66422 ERR12121210 I15549 ERS16428821 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15549 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/010/ERR12121210/ERR12121210.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/010/ERR12121210/ERR12121210.fastq.gz 114800980 0afe1d1c8f41281025ab85aee03149a3 3943515 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121210/I15549.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121210/I15549.1240k.bam.bai +I15550 half ds SAMEA114440978 PRJEB66422 ERR12121212 I15550 ERS16428762 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15550 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/012/ERR12121212/ERR12121212.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/012/ERR12121212/ERR12121212.fastq.gz 11364571 b3df1a1f41c8c1ca43cbc99fde9c2ae8 438774 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121212/I15550.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121212/I15550.1240k.bam.bai +I15551 half ds SAMEA114441026 PRJEB66422 ERR12121214 I15551 ERS16428810 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15551 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/014/ERR12121214/ERR12121214.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/014/ERR12121214/ERR12121214.fastq.gz 85637321 1fc654c64a2e935876c12b0b21cc3a7f 2764167 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121214/I15551.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121214/I15551.1240k.bam.bai +I15552 half ds SAMEA114441027 PRJEB66422 ERR12121216 I15552 ERS16428811 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15552 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/016/ERR12121216/ERR12121216.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/016/ERR12121216/ERR12121216.fastq.gz 75326036 aa4757d0641d15db3351dfb2ef40c2b1 2372198 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121216/I15552.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121216/I15552.1240k.bam.bai +I15553 half ds SAMEA114441028 PRJEB66422 ERR12121218 I15553 ERS16428812 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15553 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/018/ERR12121218/ERR12121218.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/018/ERR12121218/ERR12121218.fastq.gz 97961366 c39daf8fd7744944b632f6309ef74989 2710210 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121218/I15553.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121218/I15553.1240k.bam.bai +I15554 half ds SAMEA114441029 PRJEB66422 ERR12121220 I15554 ERS16428813 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15554 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/020/ERR12121220/ERR12121220.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/020/ERR12121220/ERR12121220.fastq.gz 43808971 bfff66109c4f3cb68494176d2e5092d9 1354241 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121220/I15554.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121220/I15554.1240k.bam.bai +I15555 half ds SAMEA114441030 PRJEB66422 ERR12121222 I15555 ERS16428814 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15555 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/022/ERR12121222/ERR12121222.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/022/ERR12121222/ERR12121222.fastq.gz 80027955 05a0d5a028f3cbeb995e3ff49bfd8087 2244925 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121222/I15555.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121222/I15555.1240k.bam.bai +I24343 half ds SAMEA114493313 PRJEB66422 ERR12121225 I24343 ERS16474971 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I24343 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/025/ERR12121225/ERR12121225.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/025/ERR12121225/ERR12121225.fastq.gz 49450549 9e5c6b77aef9a0518c62e2ebb465eec8 2053698 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121225/I24343.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121225/I24343.1240k.bam.bai +I26702 half ds SAMEA114441038 PRJEB66422 ERR12121227 I26702 ERS16428822 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26702 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/027/ERR12121227/ERR12121227.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/027/ERR12121227/ERR12121227.fastq.gz 471091613 b1da86ac27b9ed3b05a820f55c41cb6c 17545212 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121227/I26702.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121227/I26702.1240k.bam.bai +I26703 half ds SAMEA114441040 PRJEB66422 ERR12121229 I26703 ERS16428824 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26703 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/029/ERR12121229/ERR12121229.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/029/ERR12121229/ERR12121229.fastq.gz 555878549 a63282b254d1fbe70d237e1c0d9791e7 20977195 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121229/I26703.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121229/I26703.1240k.bam.bai +I26704 half ds SAMEA114441041 PRJEB66422 ERR12121231 I26704 ERS16428825 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26704 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/031/ERR12121231/ERR12121231.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/031/ERR12121231/ERR12121231.fastq.gz 526361362 7f69030be26739b39ceb8128cfb576ea 20070259 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121231/I26704.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121231/I26704.1240k.bam.bai +I26705 half ds SAMEA114441042 PRJEB66422 ERR12121233 I26705 ERS16428826 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26705 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/033/ERR12121233/ERR12121233.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/033/ERR12121233/ERR12121233.fastq.gz 262669706 a355b47a712975ba7aebd4bdaf364965 10217173 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121233/I26705.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121233/I26705.1240k.bam.bai +I26707 half ds SAMEA114441043 PRJEB66422 ERR12121235 I26707 ERS16428827 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26707 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/035/ERR12121235/ERR12121235.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/035/ERR12121235/ERR12121235.fastq.gz 454754916 547693fe47f332b456c4e88db6f167a0 17254017 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121235/I26707.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121235/I26707.1240k.bam.bai +I26708 half ds SAMEA114441039 PRJEB66422 ERR12121237 I26708 ERS16428823 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26708 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/037/ERR12121237/ERR12121237.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/037/ERR12121237/ERR12121237.fastq.gz 568618052 b8ef85e7eb2891254dcb196659132857 21340993 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121237/I26708.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121237/I26708.1240k.bam.bai +I26709 half ds SAMEA114441044 PRJEB66422 ERR12121239 I26709 ERS16428828 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26709 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/039/ERR12121239/ERR12121239.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/039/ERR12121239/ERR12121239.fastq.gz 557323024 b6cceeac0f1668f5ba4450643f2b35c3 20932200 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121239/I26709.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121239/I26709.1240k.bam.bai +I26714 half ds SAMEA114441045 PRJEB66422 ERR12121241 I26714 ERS16428829 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26714 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/041/ERR12121241/ERR12121241.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/041/ERR12121241/ERR12121241.fastq.gz 767885949 532dee3354662391920d9d097cabc566 30127993 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121241/I26714.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121241/I26714.1240k.bam.bai +I26718 half ds SAMEA114441046 PRJEB66422 ERR12121243 I26718 ERS16428830 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26718 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/043/ERR12121243/ERR12121243.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/043/ERR12121243/ERR12121243.fastq.gz 133657528 cb45da842ae17d76468fd4d2d3f2f6c4 4773871 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121243/I26718.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121243/I26718.1240k.bam.bai +I26719 half ds SAMEA114441047 PRJEB66422 ERR12121245 I26719 ERS16428831 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26719 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/045/ERR12121245/ERR12121245.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/045/ERR12121245/ERR12121245.fastq.gz 201344683 39737d1ce69fab42cb28f3aacadeaca1 7113158 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121245/I26719.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121245/I26719.1240k.bam.bai +I26745 half ds SAMEA114441048 PRJEB66422 ERR12121247 I26745 ERS16428832 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26745 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/047/ERR12121247/ERR12121247.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/047/ERR12121247/ERR12121247.fastq.gz 760488915 ee3d9c950c9b9410189c5fe53b0358d3 28520484 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121247/I26745.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121247/I26745.1240k.bam.bai +I26746 half ds SAMEA114441049 PRJEB66422 ERR12121249 I26746 ERS16428833 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26746 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/049/ERR12121249/ERR12121249.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/049/ERR12121249/ERR12121249.fastq.gz 708226900 ded32967a036fe96f4ca916aac0cf62e 26718182 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121249/I26746.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121249/I26746.1240k.bam.bai +I26747 half ds SAMEA114441050 PRJEB66422 ERR12121251 I26747 ERS16428834 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26747 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/051/ERR12121251/ERR12121251.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/051/ERR12121251/ERR12121251.fastq.gz 780484292 d66a62cfd6a7fdae7b513ef5b82cb833 29855591 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121251/I26747.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121251/I26747.1240k.bam.bai +I26748 half ds SAMEA114441051 PRJEB66422 ERR12121253 I26748 ERS16428835 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26748 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/053/ERR12121253/ERR12121253.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/053/ERR12121253/ERR12121253.fastq.gz 487355041 3b7e2ddff5a53aebeec7b15943978026 18835501 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121253/I26748.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121253/I26748.1240k.bam.bai +I26749 half ds SAMEA114441052 PRJEB66422 ERR12121255 I26749 ERS16428836 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26749 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/055/ERR12121255/ERR12121255.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/055/ERR12121255/ERR12121255.fastq.gz 324130807 282f7b228534eee65a4aae4feef6eed5 12641344 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121255/I26749.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121255/I26749.1240k.bam.bai +I26750 half ds SAMEA114441053 PRJEB66422 ERR12121257 I26750 ERS16428837 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26750 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/057/ERR12121257/ERR12121257.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/057/ERR12121257/ERR12121257.fastq.gz 762104866 2a0e699fb347c8e02b3f0c6f13b7e2a7 28912318 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121257/I26750.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121257/I26750.1240k.bam.bai +I26751 half ds SAMEA114441054 PRJEB66422 ERR12121259 I26751 ERS16428838 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26751 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/059/ERR12121259/ERR12121259.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/059/ERR12121259/ERR12121259.fastq.gz 309680718 c6f26d63f68189bb5bc849d5cb91ac8a 10043350 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121259/I26751.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121259/I26751.1240k.bam.bai +I26752 half ds SAMEA114441055 PRJEB66422 ERR12121261 I26752 ERS16428839 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26752 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/061/ERR12121261/ERR12121261.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/061/ERR12121261/ERR12121261.fastq.gz 695553810 0174b1a3699c88d1875a668a86855f21 26077749 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121261/I26752.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121261/I26752.1240k.bam.bai +I26753 half ds SAMEA114441056 PRJEB66422 ERR12121263 I26753 ERS16428840 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26753 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/063/ERR12121263/ERR12121263.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/063/ERR12121263/ERR12121263.fastq.gz 798756331 f3425f729fa9ac2bddeee6d70bd1bd84 30767759 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121263/I26753.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121263/I26753.1240k.bam.bai +I26754 half ds SAMEA114441057 PRJEB66422 ERR12121265 I26754 ERS16428841 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26754 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/065/ERR12121265/ERR12121265.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/065/ERR12121265/ERR12121265.fastq.gz 210289562 8e50efcc4903059e79ba2ecaec87ca83 7094713 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121265/I26754.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121265/I26754.1240k.bam.bai +I26761 half ds SAMEA114441058 PRJEB66422 ERR12121267 I26761 ERS16428842 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26761 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/067/ERR12121267/ERR12121267.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/067/ERR12121267/ERR12121267.fastq.gz 35067822 21d13c31d0c6dac7a9cc7794af9a43dd 1386969 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121267/I26761.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121267/I26761.1240k.bam.bai +I26762 half ds SAMEA114441059 PRJEB66422 ERR12121269 I26762 ERS16428843 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26762 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/069/ERR12121269/ERR12121269.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/069/ERR12121269/ERR12121269.fastq.gz 362720904 d94dc958034c693a423e3fc23d511120 13395647 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121269/I26762.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121269/I26762.1240k.bam.bai +I26763 half ds SAMEA114441060 PRJEB66422 ERR12121271 I26763 ERS16428844 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26763 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/071/ERR12121271/ERR12121271.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/071/ERR12121271/ERR12121271.fastq.gz 738745526 9e8fe8ededfdedd1824503c78f8adf48 28606725 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121271/I26763.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121271/I26763.1240k.bam.bai +I26764 half ds SAMEA114441061 PRJEB66422 ERR12121273 I26764 ERS16428845 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26764 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/073/ERR12121273/ERR12121273.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/073/ERR12121273/ERR12121273.fastq.gz 763564086 8ec3346976df4b90adedcec2d8a86ebf 29307399 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121273/I26764.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121273/I26764.1240k.bam.bai +I26765 half ds SAMEA114441065 PRJEB66422 ERR12121275 I26765 ERS16428849 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26765 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/075/ERR12121275/ERR12121275.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/075/ERR12121275/ERR12121275.fastq.gz 689001996 9775f459111b5ea5b4561e0e31ece54a 25974064 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121275/I26765.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121275/I26765.1240k.bam.bai +I26766 half ds SAMEA114441066 PRJEB66422 ERR12121277 I26766 ERS16428850 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26766 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/077/ERR12121277/ERR12121277.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/077/ERR12121277/ERR12121277.fastq.gz 628830782 eb0b66441f95118f22a6d96279244160 23572671 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121277/I26766.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121277/I26766.1240k.bam.bai +I26767 half ds SAMEA114441067 PRJEB66422 ERR12121279 I26767 ERS16428851 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26767 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/079/ERR12121279/ERR12121279.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/079/ERR12121279/ERR12121279.fastq.gz 341740072 872069008f5dc1bcd33eaf33f5a55583 12770762 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121279/I26767.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121279/I26767.1240k.bam.bai +I26775 half ds SAMEA114441068 PRJEB66422 ERR12121281 I26775 ERS16428852 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26775 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/081/ERR12121281/ERR12121281.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/081/ERR12121281/ERR12121281.fastq.gz 490195604 f5d1436e8cc9b26e07a44ab7d553df31 15754812 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121281/I26775.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121281/I26775.1240k.bam.bai +I26776 half ds SAMEA114441069 PRJEB66422 ERR12121283 I26776 ERS16428853 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26776 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/083/ERR12121283/ERR12121283.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/083/ERR12121283/ERR12121283.fastq.gz 326592154 c0fb643df3993f2ac455c85518d36552 11914574 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121283/I26776.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121283/I26776.1240k.bam.bai +I26894 half ds SAMEA114441070 PRJEB66422 ERR12121285 I26894 ERS16428854 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26894 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/085/ERR12121285/ERR12121285.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/085/ERR12121285/ERR12121285.fastq.gz 601611339 dd82aa58e63502fde90780957e92c0de 21728593 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121285/I26894.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121285/I26894.1240k.bam.bai +I26895 half ds SAMEA114441071 PRJEB66422 ERR12121287 I26895 ERS16428855 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26895 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/087/ERR12121287/ERR12121287.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/087/ERR12121287/ERR12121287.fastq.gz 490247939 ac3bbad7afab1b9a7c9c5215b67fa4a5 18148115 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121287/I26895.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121287/I26895.1240k.bam.bai +I26897 half ds SAMEA114441072 PRJEB66422 ERR12121289 I26897 ERS16428856 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26897 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/089/ERR12121289/ERR12121289.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/089/ERR12121289/ERR12121289.fastq.gz 778942908 d0d78c2ec9599efef0abd1898b4fe683 30169332 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121289/I26897.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121289/I26897.1240k.bam.bai +I27295 half ds SAMEA114441073 PRJEB66422 ERR12121291 I27295 ERS16428857 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I27295 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/091/ERR12121291/ERR12121291.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/091/ERR12121291/ERR12121291.fastq.gz 547155701 192d0706f8c139a8f209498cfbb3deb1 19283621 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121291/I27295.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121291/I27295.1240k.bam.bai +I27296 half ds SAMEA114441074 PRJEB66422 ERR12121293 I27296 ERS16428858 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I27296 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/093/ERR12121293/ERR12121293.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/093/ERR12121293/ERR12121293.fastq.gz 523149141 452ed5ff0cd0ed928e0f6ee369a501a9 18465838 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121293/I27296.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121293/I27296.1240k.bam.bai +I27297 half ds SAMEA114441075 PRJEB66422 ERR12121295 I27297 ERS16428859 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I27297 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/095/ERR12121295/ERR12121295.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/095/ERR12121295/ERR12121295.fastq.gz 571026490 69ba1f7ff7d7f31e1c936f478e264d73 20615772 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121295/I27297.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121295/I27297.1240k.bam.bai +I27298 half ds SAMEA114441076 PRJEB66422 ERR12121297 I27298 ERS16428860 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I27298 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/097/ERR12121297/ERR12121297.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/097/ERR12121297/ERR12121297.fastq.gz 600693203 9d036e4b2cfd27c783db193d4fcb792a 21970602 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121297/I27298.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121297/I27298.1240k.bam.bai +I28388 half ds SAMEA114441077 PRJEB66422 ERR12121299 I28388 ERS16428861 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28388 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/099/ERR12121299/ERR12121299.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/099/ERR12121299/ERR12121299.fastq.gz 683277194 787cc651e88abd6060acfdc5f9e6122c 24693998 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121299/I28388.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121299/I28388.1240k.bam.bai +I28390 half ds SAMEA114441078 PRJEB66422 ERR12121301 I28390 ERS16428862 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28390 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/001/ERR12121301/ERR12121301.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/001/ERR12121301/ERR12121301.fastq.gz 686570268 5befecf0235d4b94b7b8917f40026af7 25356521 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121301/I28390.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121301/I28390.1240k.bam.bai +I28392 half ds SAMEA114441079 PRJEB66422 ERR12121303 I28392 ERS16428863 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28392 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/003/ERR12121303/ERR12121303.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/003/ERR12121303/ERR12121303.fastq.gz 715295432 ed2c21fb2209ab831562bce8fb2bd548 25685154 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121303/I28392.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121303/I28392.1240k.bam.bai +I28393 half ds SAMEA114441080 PRJEB66422 ERR12121305 I28393 ERS16428864 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28393 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/005/ERR12121305/ERR12121305.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/005/ERR12121305/ERR12121305.fastq.gz 645419372 6e5d0d82f20e760249253c298ade5036 23352337 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121305/I28393.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121305/I28393.1240k.bam.bai +I28394 half ds SAMEA114441081 PRJEB66422 ERR12121307 I28394 ERS16428865 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28394 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/007/ERR12121307/ERR12121307.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/007/ERR12121307/ERR12121307.fastq.gz 703310233 a0827c258653832c2f9836ca51eb5472 25066977 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121307/I28394.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121307/I28394.1240k.bam.bai +I28397 half ds SAMEA114441082 PRJEB66422 ERR12121309 I28397 ERS16428866 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28397 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/009/ERR12121309/ERR12121309.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/009/ERR12121309/ERR12121309.fastq.gz 689857585 841d2c8e5eb0233512ccbeffc3d2a351 25536913 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121309/I28397.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121309/I28397.1240k.bam.bai +I28398 half ds SAMEA114441083 PRJEB66422 ERR12121311 I28398 ERS16428867 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28398 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/011/ERR12121311/ERR12121311.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/011/ERR12121311/ERR12121311.fastq.gz 574698444 8e874eb398426985ebf3cbe2575d7cbd 20459395 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121311/I28398.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121311/I28398.1240k.bam.bai +I28400 half ds SAMEA114441084 PRJEB66422 ERR12121313 I28400 ERS16428868 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28400 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/013/ERR12121313/ERR12121313.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/013/ERR12121313/ERR12121313.fastq.gz 605577282 fc7f8e58a4af2d6182165667ebbfb59f 21606182 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121313/I28400.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121313/I28400.1240k.bam.bai +I28446 half ds SAMEA114441062 PRJEB66422 ERR12121315 I28446 ERS16428846 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28446 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/015/ERR12121315/ERR12121315.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/015/ERR12121315/ERR12121315.fastq.gz 308935148 3ebcb76476efbe1f926da8f011227576 10784060 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121315/I28446.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121315/I28446.1240k.bam.bai +I28447 half ds SAMEA114441063 PRJEB66422 ERR12121317 I28447 ERS16428847 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28447 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/017/ERR12121317/ERR12121317.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/017/ERR12121317/ERR12121317.fastq.gz 655471903 87937fcbbc5e4a889f9c771d6cc2c6c7 24693391 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121317/I28447.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121317/I28447.1240k.bam.bai +I28448 half ds SAMEA114441064 PRJEB66422 ERR12121319 I28448 ERS16428848 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28448 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/019/ERR12121319/ERR12121319.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/019/ERR12121319/ERR12121319.fastq.gz 593855692 1ad9610ae32a3be4c47d2edd7a95a5a5 21393341 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121319/I28448.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121319/I28448.1240k.bam.bai +I32298 half ds SAMEA114441020 PRJEB66422 ERR12121322 I32298 ERS16428804 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I32298 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/022/ERR12121322/ERR12121322.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/022/ERR12121322/ERR12121322.fastq.gz 27885729 e6758826a66f2cf5cf744897f3974f64 1062198 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121322/I32298.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121322/I32298.1240k.bam.bai +I32299 half ds SAMEA114441019 PRJEB66422 ERR12121324 I32299 ERS16428803 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I32299 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/024/ERR12121324/ERR12121324.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/024/ERR12121324/ERR12121324.fastq.gz 112927640 c1a68f80e56831f07ece663043fc8939 3011263 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121324/I32299.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121324/I32299.1240k.bam.bai +I32300 half ds SAMEA114441018 PRJEB66422 ERR12121326 I32300 ERS16428802 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I32300 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/026/ERR12121326/ERR12121326.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/026/ERR12121326/ERR12121326.fastq.gz 129056435 d6f3d2235cbf4d66896f27a82e35f882 3495522 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121326/I32300.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121326/I32300.1240k.bam.bai +I32301 half ds SAMEA114441017 PRJEB66422 ERR12121328 I32301 ERS16428801 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I32301 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/028/ERR12121328/ERR12121328.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/028/ERR12121328/ERR12121328.fastq.gz 21357694 77b339ad939d773ab6463a2a6be59231 655496 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121328/I32301.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121328/I32301.1240k.bam.bai +I32304 half ds SAMEA114441099 PRJEB66422 ERR12121331 I32304 ERS16428883 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I32304 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/031/ERR12121331/ERR12121331.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/031/ERR12121331/ERR12121331.fastq.gz 9103017 566443c18622905ee5082f9b549bda51 326248 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121331/I32304.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121331/I32304.1240k.bam.bai +I32305 half ds SAMEA114441016 PRJEB66422 ERR12121333 I32305 ERS16428800 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I32305 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/033/ERR12121333/ERR12121333.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/033/ERR12121333/ERR12121333.fastq.gz 322104747 83442b10778a45a5dfece82e616b11db 8895583 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121333/I32305.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121333/I32305.1240k.bam.bai +I34800 half ds SAMEA114441085 PRJEB66422 ERR12121335 I34800 ERS16428869 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I34800 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/035/ERR12121335/ERR12121335.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/035/ERR12121335/ERR12121335.fastq.gz 535366972 82ddde6d934b775f437408bc431fb6fc 17127996 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121335/I34800.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121335/I34800.1240k.bam.bai +I34980 half ds SAMEA114441090 PRJEB66422 ERR12121337 I34980 ERS16428874 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I34980 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/037/ERR12121337/ERR12121337.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/037/ERR12121337/ERR12121337.fastq.gz 763057891 cefa36db7471fb5a094eb75a25712dfd 27235737 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121337/I34980.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121337/I34980.1240k.bam.bai +I35008 half ds SAMEA114441094 PRJEB66422 ERR12121339 I35008 ERS16428878 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I35008 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/039/ERR12121339/ERR12121339.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/039/ERR12121339/ERR12121339.fastq.gz 808635595 3d42e71081d09d16bde825a3d54446fb 28966314 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121339/I35008.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121339/I35008.1240k.bam.bai +I35010 half ds SAMEA114441093 PRJEB66422 ERR12121341 I35010 ERS16428877 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I35010 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/041/ERR12121341/ERR12121341.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/041/ERR12121341/ERR12121341.fastq.gz 750431398 6b216608d0207a8257fe560908256bb3 26204311 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121341/I35010.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121341/I35010.1240k.bam.bai +I35012 half ds SAMEA114441089 PRJEB66422 ERR12121343 I35012 ERS16428873 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I35012 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/043/ERR12121343/ERR12121343.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/043/ERR12121343/ERR12121343.fastq.gz 583414524 6838759549e8dc7c6e0eab3336e2b44f 20428429 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121343/I35012.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121343/I35012.1240k.bam.bai +I35014 half ds SAMEA114441091 PRJEB66422 ERR12121345 I35014 ERS16428875 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I35014 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/045/ERR12121345/ERR12121345.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/045/ERR12121345/ERR12121345.fastq.gz 84808278 3a1419ca92868df382719a43d8d2fbfb 2249019 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121345/I35014.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121345/I35014.1240k.bam.bai +I35081 half ds SAMEA114441088 PRJEB66422 ERR12121347 I35081 ERS16428872 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I35081 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/047/ERR12121347/ERR12121347.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/047/ERR12121347/ERR12121347.fastq.gz 906471874 a20df878de2e6138a35885e21b970589 32434999 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121347/I35081.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121347/I35081.1240k.bam.bai +I35095 half ds SAMEA114441092 PRJEB66422 ERR12121349 I35095 ERS16428876 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I35095 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/049/ERR12121349/ERR12121349.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/049/ERR12121349/ERR12121349.fastq.gz 721088772 2ed49834d32fdeff3ebf6e690e58507b 23668108 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121349/I35095.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121349/I35095.1240k.bam.bai +I4664 half ds SAMEA114441104 PRJEB66422 ERR12121352 I4664 ERS16428888 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I4664 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/052/ERR12121352/ERR12121352.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/052/ERR12121352/ERR12121352.fastq.gz 3580897 60ec188beb6de7f564331210f740d423 114821 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121352/I4664.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121352/I4664.1240k.bam.bai +I4803 half ds SAMEA114441095 PRJEB66422 ERR12121354 I4803 ERS16428879 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I4803 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/054/ERR12121354/ERR12121354.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/054/ERR12121354/ERR12121354.fastq.gz 437570957 a9e8dc355123983be74ef4449a9497c1 13503516 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121354/I4803.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121354/I4803.1240k.bam.bai +I5404 plus ss SAMEA114441086 PRJEB66422 ERR12121357 I5404 ERS16428870 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I5404 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/057/ERR12121357/ERR12121357.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/057/ERR12121357/ERR12121357.fastq.gz 93562642 9c48a3be699b844cd4b77834f31d3716 2761457 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121357/I5404.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121357/I5404.1240k.bam.bai From 9e41e5691732c78018ae5b2cdafa6c26711153f4 Mon Sep 17 00:00:00 2001 From: danimfernandes Date: Wed, 21 Feb 2024 13:51:43 +0000 Subject: [PATCH 02/17] Rename Olalde_Cell_Roman_2024.ssf to 2024_OlaldeCarrion_Roman.ssf --- .../{Olalde_Cell_Roman_2024.ssf => 2024_OlaldeCarrion_Roman.ssf} | 0 1 file changed, 0 insertions(+), 0 deletions(-) rename packages/2024_OlaldeCarrion_Roma/{Olalde_Cell_Roman_2024.ssf => 2024_OlaldeCarrion_Roman.ssf} (100%) diff --git a/packages/2024_OlaldeCarrion_Roma/Olalde_Cell_Roman_2024.ssf b/packages/2024_OlaldeCarrion_Roma/2024_OlaldeCarrion_Roman.ssf similarity index 100% rename from packages/2024_OlaldeCarrion_Roma/Olalde_Cell_Roman_2024.ssf rename to packages/2024_OlaldeCarrion_Roma/2024_OlaldeCarrion_Roman.ssf From 2d2267b2b92471ab9bdda3980b1520df440525aa Mon Sep 17 00:00:00 2001 From: danimfernandes Date: Wed, 21 Feb 2024 13:55:45 +0000 Subject: [PATCH 03/17] Rename 2024_OlaldeCarrion_Roman.ssf to 2024_OlaldeCarrion_Roma2024_OlaldeCarrion_Roman.ssf --- .../2024_OlaldeCarrion_Roma2024_OlaldeCarrion_Roman.ssf} | 0 1 file changed, 0 insertions(+), 0 deletions(-) rename packages/{2024_OlaldeCarrion_Roma/2024_OlaldeCarrion_Roman.ssf => 2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roma2024_OlaldeCarrion_Roman.ssf} (100%) diff --git a/packages/2024_OlaldeCarrion_Roma/2024_OlaldeCarrion_Roman.ssf b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roma2024_OlaldeCarrion_Roman.ssf similarity index 100% rename from packages/2024_OlaldeCarrion_Roma/2024_OlaldeCarrion_Roman.ssf rename to packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roma2024_OlaldeCarrion_Roman.ssf From 445981794ba09e8152842dad8b659d23d6f7c185 Mon Sep 17 00:00:00 2001 From: danimfernandes Date: Wed, 21 Feb 2024 13:55:59 +0000 Subject: [PATCH 04/17] Rename 2024_OlaldeCarrion_Roma2024_OlaldeCarrion_Roman.ssf to 2024_OlaldeCarrion_Roman.ssf --- ...a2024_OlaldeCarrion_Roman.ssf => 2024_OlaldeCarrion_Roman.ssf} | 0 1 file changed, 0 insertions(+), 0 deletions(-) rename packages/2024_OlaldeCarrion_Roman/{2024_OlaldeCarrion_Roma2024_OlaldeCarrion_Roman.ssf => 2024_OlaldeCarrion_Roman.ssf} (100%) diff --git a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roma2024_OlaldeCarrion_Roman.ssf b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.ssf similarity index 100% rename from packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roma2024_OlaldeCarrion_Roman.ssf rename to packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.ssf From 36432e77d2b5959441ce0b94891d464cf4a5d699 Mon Sep 17 00:00:00 2001 From: delphis-bot Date: Mon, 26 Feb 2024 15:40:11 +0000 Subject: [PATCH 05/17] [automated] Create package recipe from SSF files --- .../2024_OlaldeCarrion_Roman.config | 41 +++++ .../2024_OlaldeCarrion_Roman.tsv | 140 ++++++++++++++++++ .../2024_OlaldeCarrion_Roman.tsv_patch.sh | 45 ++++++ .../script_versions.txt | 2 + 4 files changed, 228 insertions(+) create mode 100644 packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.config create mode 100644 packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv create mode 100755 packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv_patch.sh create mode 100644 packages/2024_OlaldeCarrion_Roman/script_versions.txt diff --git a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.config b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.config new file mode 100644 index 0000000..57c4b92 --- /dev/null +++ b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.config @@ -0,0 +1,41 @@ +// Keep track of config versions +minotaur_release='0.2.1' // The release tag of the poseidon-eager repository used for processing and config file retrieval +config_template_version='0.3.0dev' +package_config_version='0.3.0dev' +minotaur_config_base="https://raw.githubusercontent.com/poseidon-framework/poseidon-eager/${minotaur_release}/conf" + +// This configuration file is designed to be a used with the nf-core/eager pipeline. +// Instead of having to specify all other configurations for the Minotaur pipeline +// on runtime, they are all contained in this file and loaded automatically upon +// specifying this config file during runtime. Additionally, any parameters that +// need to be altered from the defaults can be specified here. +// +// The intention is to make it easy for users to understand and reproduce the output +// from processing with the Minotaur workflow processing from the contents of a +// single file. + +// Load configuration profiles. They are loaded from the minotaur_config_base URL, main branch. +includeConfig "${minotaur_config_base}/EVA_cluster.config" // Cluster-specific configurations for nf-core/eager execution at MPI-EVA +includeConfig "${minotaur_config_base}/Minotaur.config" // Default nf-core/eager parameters for Minotaur processing. + +// The following config file specifies BED files for on-target endogenous DNA calculation and mean coverage as well as pseudohaploid genotyping. +// TODO: Select the appropriate config for the CaptureType of the package. +includeConfig "${minotaur_config_base}/CaptureType_profiles/1240K.config" + +params { + // Keep track of config file versions used when processing + config_profile_description = "${config_profile_description}\n - config_template_version: ${config_template_version}\n - package_config_version: ${package_config_version}" + config_profile_contact = "Thiseas C. Lamnidis (@TCLamnidis)" + + /* + TODO: If you need to change any of the default processing parameters for this package + you can specify these parameters below. + Any parameters not specified in any of the config files default to their nf-core/eager default values. + + For information on all available parameters and their default values see: + https://nf-co.re/eager/2.4.6/parameters + + You can see the default values for parameters within poseidon-eager at: + https://github.com/poseidon-framework/poseidon-eager/blob/main/conf/Minotaur.config + */ +} diff --git a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv new file mode 100644 index 0000000..366f166 --- /dev/null +++ b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv @@ -0,0 +1,140 @@ +Sample_Name Library_ID Lane Colour_Chemistry SeqType Organism Strandedness UDG_Treatment R1 R2 BAM R1_target_file R2_target_file +I1116 I1116_I1116 1 4 SE Homo sapiens (modern human) double half /I1116_I1116_L1_R1.fastq.gz NA NA ERR12121073.fastq.gz NA +I12991 I12991_I12991 1 4 SE Homo sapiens (modern human) double half /I12991_I12991_L1_R1.fastq.gz NA NA ERR12121075.fastq.gz NA +I13458 I13458_I13458 1 4 SE Homo sapiens (modern human) double half /I13458_I13458_L1_R1.fastq.gz NA NA ERR12121077.fastq.gz NA +I15232 I15232_I15232 1 4 SE Homo sapiens (modern human) double half /I15232_I15232_L1_R1.fastq.gz NA NA ERR12121079.fastq.gz NA +I15485 I15485_I15485 1 4 SE Homo sapiens (modern human) double half /I15485_I15485_L1_R1.fastq.gz NA NA ERR12121081.fastq.gz NA +I15486 I15486_I15486 1 4 SE Homo sapiens (modern human) double half /I15486_I15486_L1_R1.fastq.gz NA NA ERR12121083.fastq.gz NA +I15487 I15487_I15487 1 4 SE Homo sapiens (modern human) double half /I15487_I15487_L1_R1.fastq.gz NA NA ERR12121085.fastq.gz NA +I15488 I15488_I15488 1 4 SE Homo sapiens (modern human) double half /I15488_I15488_L1_R1.fastq.gz NA NA ERR12121087.fastq.gz NA 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/I15496_I15496_L1_R1.fastq.gz NA NA ERR12121103.fastq.gz NA +I15497 I15497_I15497 1 4 SE Homo sapiens (modern human) double half /I15497_I15497_L1_R1.fastq.gz NA NA ERR12121105.fastq.gz NA +I15498 I15498_I15498 1 4 SE Homo sapiens (modern human) double half /I15498_I15498_L1_R1.fastq.gz NA NA ERR12121107.fastq.gz NA +I15499 I15499_I15499 1 4 SE Homo sapiens (modern human) double half /I15499_I15499_L1_R1.fastq.gz NA NA ERR12121109.fastq.gz NA +I15500 I15500_I15500 1 4 SE Homo sapiens (modern human) double half /I15500_I15500_L1_R1.fastq.gz NA NA ERR12121111.fastq.gz NA +I15501 I15501_I15501 1 4 SE Homo sapiens (modern human) double half /I15501_I15501_L1_R1.fastq.gz NA NA ERR12121113.fastq.gz NA +I15502 I15502_I15502 1 4 SE Homo sapiens (modern human) double half /I15502_I15502_L1_R1.fastq.gz NA NA ERR12121115.fastq.gz NA +I15503 I15503_I15503 1 4 SE Homo sapiens (modern human) double half /I15503_I15503_L1_R1.fastq.gz NA NA ERR12121117.fastq.gz NA +I15504 I15504_I15504 1 4 SE Homo sapiens (modern human) double half /I15504_I15504_L1_R1.fastq.gz NA NA ERR12121119.fastq.gz NA +I15505 I15505_I15505 1 4 SE Homo sapiens (modern human) double half /I15505_I15505_L1_R1.fastq.gz NA NA ERR12121121.fastq.gz NA +I15507 I15507_I15507 1 4 SE Homo sapiens (modern human) double half /I15507_I15507_L1_R1.fastq.gz NA NA ERR12121124.fastq.gz NA +I15508 I15508_I15508 1 4 SE Homo sapiens (modern human) double half /I15508_I15508_L1_R1.fastq.gz NA NA ERR12121126.fastq.gz NA +I15509 I15509_I15509 1 4 SE Homo sapiens (modern human) double half /I15509_I15509_L1_R1.fastq.gz NA NA ERR12121128.fastq.gz NA +I15510 I15510_I15510 1 4 SE Homo sapiens (modern human) double half /I15510_I15510_L1_R1.fastq.gz NA NA ERR12121130.fastq.gz NA +I15511 I15511_I15511 1 4 SE Homo sapiens (modern human) double half /I15511_I15511_L1_R1.fastq.gz NA NA ERR12121132.fastq.gz NA +I15512 I15512_I15512 1 4 SE Homo sapiens (modern human) double half /I15512_I15512_L1_R1.fastq.gz NA NA ERR12121134.fastq.gz NA 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/I15520_I15520_L1_R1.fastq.gz NA NA ERR12121150.fastq.gz NA +I15521 I15521_I15521 1 4 SE Homo sapiens (modern human) double half /I15521_I15521_L1_R1.fastq.gz NA NA ERR12121152.fastq.gz NA +I15522 I15522_I15522 1 4 SE Homo sapiens (modern human) double half /I15522_I15522_L1_R1.fastq.gz NA NA ERR12121154.fastq.gz NA +I15523 I15523_I15523 1 4 SE Homo sapiens (modern human) double half /I15523_I15523_L1_R1.fastq.gz NA NA ERR12121156.fastq.gz NA +I15524 I15524_I15524 1 4 SE Homo sapiens (modern human) double half /I15524_I15524_L1_R1.fastq.gz NA NA ERR12121158.fastq.gz NA +I15525 I15525_I15525 1 4 SE Homo sapiens (modern human) double half /I15525_I15525_L1_R1.fastq.gz NA NA ERR12121160.fastq.gz NA +I15526 I15526_I15526 1 4 SE Homo sapiens (modern human) double half /I15526_I15526_L1_R1.fastq.gz NA NA ERR12121162.fastq.gz NA +I15527 I15527_I15527 1 4 SE Homo sapiens (modern human) double half /I15527_I15527_L1_R1.fastq.gz NA NA ERR12121164.fastq.gz NA +I15528 I15528_I15528 1 4 SE Homo 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/I15543_I15543_L1_R1.fastq.gz NA NA ERR12121198.fastq.gz NA +I15544 I15544_I15544 1 4 SE Homo sapiens (modern human) double half /I15544_I15544_L1_R1.fastq.gz NA NA ERR12121200.fastq.gz NA +I15545 I15545_I15545 1 4 SE Homo sapiens (modern human) double half /I15545_I15545_L1_R1.fastq.gz NA NA ERR12121202.fastq.gz NA +I15546 I15546_I15546 1 4 SE Homo sapiens (modern human) double half /I15546_I15546_L1_R1.fastq.gz NA NA ERR12121204.fastq.gz NA +I15547 I15547_I15547 1 4 SE Homo sapiens (modern human) double half /I15547_I15547_L1_R1.fastq.gz NA NA ERR12121206.fastq.gz NA +I15548 I15548_I15548 1 4 SE Homo sapiens (modern human) double half /I15548_I15548_L1_R1.fastq.gz NA NA ERR12121208.fastq.gz NA +I15549 I15549_I15549 1 4 SE Homo sapiens (modern human) double half /I15549_I15549_L1_R1.fastq.gz NA NA ERR12121210.fastq.gz NA +I15550 I15550_I15550 1 4 SE Homo sapiens (modern human) double half /I15550_I15550_L1_R1.fastq.gz NA NA ERR12121212.fastq.gz NA +I15551 I15551_I15551 1 4 SE Homo 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/I26719_I26719_L1_R1.fastq.gz NA NA ERR12121245.fastq.gz NA +I26745 I26745_I26745 1 4 SE Homo sapiens (modern human) double half /I26745_I26745_L1_R1.fastq.gz NA NA ERR12121247.fastq.gz NA +I26746 I26746_I26746 1 4 SE Homo sapiens (modern human) double half /I26746_I26746_L1_R1.fastq.gz NA NA ERR12121249.fastq.gz NA +I26747 I26747_I26747 1 4 SE Homo sapiens (modern human) double half /I26747_I26747_L1_R1.fastq.gz NA NA ERR12121251.fastq.gz NA +I26748 I26748_I26748 1 4 SE Homo sapiens (modern human) double half /I26748_I26748_L1_R1.fastq.gz NA NA ERR12121253.fastq.gz NA +I26749 I26749_I26749 1 4 SE Homo sapiens (modern human) double half /I26749_I26749_L1_R1.fastq.gz NA NA ERR12121255.fastq.gz NA +I26750 I26750_I26750 1 4 SE Homo sapiens (modern human) double half /I26750_I26750_L1_R1.fastq.gz NA NA ERR12121257.fastq.gz NA +I26751 I26751_I26751 1 4 SE Homo sapiens (modern human) double half /I26751_I26751_L1_R1.fastq.gz NA NA ERR12121259.fastq.gz NA +I26752 I26752_I26752 1 4 SE Homo sapiens (modern human) double half /I26752_I26752_L1_R1.fastq.gz NA NA ERR12121261.fastq.gz NA +I26753 I26753_I26753 1 4 SE Homo sapiens (modern human) double half /I26753_I26753_L1_R1.fastq.gz NA NA ERR12121263.fastq.gz NA +I26754 I26754_I26754 1 4 SE Homo sapiens (modern human) double half /I26754_I26754_L1_R1.fastq.gz NA NA ERR12121265.fastq.gz NA +I26761 I26761_I26761 1 4 SE Homo sapiens (modern human) double half /I26761_I26761_L1_R1.fastq.gz NA NA ERR12121267.fastq.gz NA +I26762 I26762_I26762 1 4 SE Homo sapiens (modern human) double half /I26762_I26762_L1_R1.fastq.gz NA NA ERR12121269.fastq.gz NA +I26763 I26763_I26763 1 4 SE Homo sapiens (modern human) double half /I26763_I26763_L1_R1.fastq.gz NA NA ERR12121271.fastq.gz NA +I26764 I26764_I26764 1 4 SE Homo sapiens (modern human) double half /I26764_I26764_L1_R1.fastq.gz NA NA ERR12121273.fastq.gz NA +I26765 I26765_I26765 1 4 SE Homo sapiens (modern human) double half /I26765_I26765_L1_R1.fastq.gz NA NA ERR12121275.fastq.gz NA +I26766 I26766_I26766 1 4 SE Homo sapiens (modern human) double half /I26766_I26766_L1_R1.fastq.gz NA NA ERR12121277.fastq.gz NA +I26767 I26767_I26767 1 4 SE Homo sapiens (modern human) double half /I26767_I26767_L1_R1.fastq.gz NA NA ERR12121279.fastq.gz NA +I26775 I26775_I26775 1 4 SE Homo sapiens (modern human) double half /I26775_I26775_L1_R1.fastq.gz NA NA ERR12121281.fastq.gz NA +I26776 I26776_I26776 1 4 SE Homo sapiens (modern human) double half /I26776_I26776_L1_R1.fastq.gz NA NA ERR12121283.fastq.gz NA +I26894 I26894_I26894 1 4 SE Homo sapiens (modern human) double half /I26894_I26894_L1_R1.fastq.gz NA NA ERR12121285.fastq.gz NA +I26895 I26895_I26895 1 4 SE Homo sapiens (modern human) double half /I26895_I26895_L1_R1.fastq.gz NA NA ERR12121287.fastq.gz NA +I26897 I26897_I26897 1 4 SE Homo sapiens (modern human) double half /I26897_I26897_L1_R1.fastq.gz NA NA ERR12121289.fastq.gz NA +I27295 I27295_I27295 1 4 SE Homo sapiens (modern human) double half /I27295_I27295_L1_R1.fastq.gz NA NA ERR12121291.fastq.gz NA +I27296 I27296_I27296 1 4 SE Homo sapiens (modern human) double half /I27296_I27296_L1_R1.fastq.gz NA NA ERR12121293.fastq.gz NA +I27297 I27297_I27297 1 4 SE Homo sapiens (modern human) double half /I27297_I27297_L1_R1.fastq.gz NA NA ERR12121295.fastq.gz NA +I27298 I27298_I27298 1 4 SE Homo sapiens (modern human) double half /I27298_I27298_L1_R1.fastq.gz NA NA ERR12121297.fastq.gz NA +I28388 I28388_I28388 1 4 SE Homo sapiens (modern human) double half /I28388_I28388_L1_R1.fastq.gz NA NA ERR12121299.fastq.gz NA +I28390 I28390_I28390 1 4 SE Homo sapiens (modern human) double half /I28390_I28390_L1_R1.fastq.gz NA NA ERR12121301.fastq.gz NA +I28392 I28392_I28392 1 4 SE Homo sapiens (modern human) double half /I28392_I28392_L1_R1.fastq.gz NA NA ERR12121303.fastq.gz NA +I28393 I28393_I28393 1 4 SE Homo sapiens (modern human) double half /I28393_I28393_L1_R1.fastq.gz NA NA ERR12121305.fastq.gz NA +I28394 I28394_I28394 1 4 SE Homo sapiens (modern human) double half /I28394_I28394_L1_R1.fastq.gz NA NA ERR12121307.fastq.gz NA +I28397 I28397_I28397 1 4 SE Homo sapiens (modern human) double half /I28397_I28397_L1_R1.fastq.gz NA NA ERR12121309.fastq.gz NA +I28398 I28398_I28398 1 4 SE Homo sapiens (modern human) double half /I28398_I28398_L1_R1.fastq.gz NA NA ERR12121311.fastq.gz NA +I28400 I28400_I28400 1 4 SE Homo sapiens (modern human) double half /I28400_I28400_L1_R1.fastq.gz NA NA ERR12121313.fastq.gz NA +I28446 I28446_I28446 1 4 SE Homo sapiens (modern human) double half /I28446_I28446_L1_R1.fastq.gz NA NA ERR12121315.fastq.gz NA +I28447 I28447_I28447 1 4 SE Homo sapiens (modern human) double half /I28447_I28447_L1_R1.fastq.gz NA NA ERR12121317.fastq.gz NA +I28448 I28448_I28448 1 4 SE Homo sapiens (modern human) double half /I28448_I28448_L1_R1.fastq.gz NA NA ERR12121319.fastq.gz NA +I32298 I32298_I32298 1 4 SE Homo sapiens (modern human) double half /I32298_I32298_L1_R1.fastq.gz NA NA ERR12121322.fastq.gz NA +I32299 I32299_I32299 1 4 SE Homo sapiens (modern human) double half /I32299_I32299_L1_R1.fastq.gz NA NA ERR12121324.fastq.gz NA +I32300 I32300_I32300 1 4 SE Homo sapiens (modern human) double half /I32300_I32300_L1_R1.fastq.gz NA NA ERR12121326.fastq.gz NA +I32301 I32301_I32301 1 4 SE Homo sapiens (modern human) double half /I32301_I32301_L1_R1.fastq.gz NA NA ERR12121328.fastq.gz NA +I32304 I32304_I32304 1 4 SE Homo sapiens (modern human) double half /I32304_I32304_L1_R1.fastq.gz NA NA ERR12121331.fastq.gz NA +I32305 I32305_I32305 1 4 SE Homo sapiens (modern human) double half /I32305_I32305_L1_R1.fastq.gz NA NA ERR12121333.fastq.gz NA +I34800 I34800_I34800 1 4 SE Homo sapiens (modern human) double half /I34800_I34800_L1_R1.fastq.gz NA NA ERR12121335.fastq.gz NA +I34980 I34980_I34980 1 4 SE Homo sapiens (modern human) double half /I34980_I34980_L1_R1.fastq.gz NA NA ERR12121337.fastq.gz NA +I35008 I35008_I35008 1 4 SE Homo sapiens (modern human) double half /I35008_I35008_L1_R1.fastq.gz NA NA ERR12121339.fastq.gz NA +I35010 I35010_I35010 1 4 SE Homo sapiens (modern human) double half /I35010_I35010_L1_R1.fastq.gz NA NA ERR12121341.fastq.gz NA +I35012 I35012_I35012 1 4 SE Homo sapiens (modern human) double half /I35012_I35012_L1_R1.fastq.gz NA NA ERR12121343.fastq.gz NA +I35014 I35014_I35014 1 4 SE Homo sapiens (modern human) double half /I35014_I35014_L1_R1.fastq.gz NA NA ERR12121345.fastq.gz NA +I35081 I35081_I35081 1 4 SE Homo sapiens (modern human) double half /I35081_I35081_L1_R1.fastq.gz NA NA ERR12121347.fastq.gz NA +I35095 I35095_I35095 1 4 SE Homo sapiens (modern human) double half /I35095_I35095_L1_R1.fastq.gz NA NA ERR12121349.fastq.gz NA +I4664 I4664_I4664 1 4 SE Homo sapiens (modern human) double half /I4664_I4664_L1_R1.fastq.gz NA NA ERR12121352.fastq.gz NA +I4803 I4803_I4803 1 4 SE Homo sapiens (modern human) double half /I4803_I4803_L1_R1.fastq.gz NA NA ERR12121354.fastq.gz NA +I5404_ss I5404_ss_I5404_ss 1 4 SE Homo sapiens (modern human) single full /I5404_ss_I5404_ss_L1_R1.fastq.gz NA NA ERR12121357.fastq.gz NA diff --git a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv_patch.sh b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv_patch.sh new file mode 100755 index 0000000..422e836 --- /dev/null +++ b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv_patch.sh @@ -0,0 +1,45 @@ +#!/usr/bin/env bash +set -uo pipefail ## Pipefail, complain on new unassigned variables. + +## Track the version of the TSV_patch template used +VERSION='0.2.0dev' + +## This script is applied to the eager input TSV file locally to edit the dummy +## path to the fastQ files added by `create_eager_input.sh` to a real local +## path provided as a positional argument. Any further local tweaks to the +## TSV before running eager should be added below that in the form of bash +## commands to aid in reproducibility. + +## usage tsv_patch.sh + +local_data_dir="$(readlink -f ${1})" +input_tsv="$(readlink -f ${2})" +output_tsv="$(dirname ${local_data_dir})/$(basename -s ".tsv" ${input_tsv}).finalised.tsv" +columns_to_keep=("Sample_Name" "Library_ID" "Lane" "Colour_Chemistry" "SeqType" "Organism" "Strandedness" "UDG_Treatment" "R1" "R2" "BAM") +source $(dirname ${2})/../../scripts/source_me.sh ## Load helper functions + +## Index non-proliferated columns and exclude them from the finalised TSV +cut_selector='' +tsv_header=($(head -n1 ${input_tsv})) +for col_name in ${columns_to_keep[@]}; do + let idx=$(get_index_of ${col_name} "${columns_to_keep[@]}")+1 ## awk uses 1-based indexing + if [[ ! ${idx} -eq -1 ]]; then + cut_selector+="${idx}," + fi +done + +## Remove added columns, and put columns in right order +cut -f ${cut_selector%,} ${input_tsv} > ${output_tsv} +sed -i -e "s||${local_data_dir}|g" ${output_tsv} + +## Any further commands to edit the file before finalisation should be added below as shown +# sed -ie 's/replace_this/with_this/g' ${output_tsv} + +## Keep track of versions +version_file="$(dirname ${input_tsv})/script_versions.txt" +## Remove versions from older run if there +grep -v -F -e "$(basename ${0})" -e "source_me.sh for final TSV" ${version_file} >${version_file}.new +## Then add new versions +echo -e "$(basename ${0}):\t${VERSION}" >> ${version_file}.new +echo -e "source_me.sh for final TSV:\t${HELPER_FUNCTION_VERSION}" >>${version_file}.new +mv ${version_file}.new ${version_file} diff --git a/packages/2024_OlaldeCarrion_Roman/script_versions.txt b/packages/2024_OlaldeCarrion_Roman/script_versions.txt new file mode 100644 index 0000000..be6857b --- /dev/null +++ b/packages/2024_OlaldeCarrion_Roman/script_versions.txt @@ -0,0 +1,2 @@ +create_eager_input.sh: 0.2.1dev +source_me.sh for initial TSV: 0.2.1dev From 957cfa8364fa0b90ce3e209818b30c884039704b Mon Sep 17 00:00:00 2001 From: danimfernandes Date: Tue, 27 Feb 2024 11:46:23 +0000 Subject: [PATCH 06/17] Update 2024_OlaldeCarrion_Roman.ssf --- .../2024_OlaldeCarrion_Roman.ssf | 280 +++++++++--------- 1 file changed, 140 insertions(+), 140 deletions(-) diff --git a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.ssf b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.ssf index 0fa5a3e..d785a9b 100644 --- a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.ssf +++ b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.ssf @@ -1,140 +1,140 @@ -poseidon_IDs udg library_built sample_accession study_accession run_accession sample_alias secondary_sample_accession first_public last_updated instrument_model library_layout library_source instrument_platform library_name library_strategy fastq_ftp fastq_aspera fastq_bytes fastq_md5 read_count submitted_ftp -I1116 half ds SAMEA114441087 PRJEB66422 ERR12121073 I1116 ERS16428871 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I1116 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/073/ERR12121073/ERR12121073.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/073/ERR12121073/ERR12121073.fastq.gz 5018568227 232c2d2e7aa77683fd149c354a952dc3 109682971 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121073/I1116.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121073/I1116.1240k.bam.bai -I12991 half ds SAMEA114441096 PRJEB66422 ERR12121075 I12991 ERS16428880 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I12991 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/075/ERR12121075/ERR12121075.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/075/ERR12121075/ERR12121075.fastq.gz 383352878 68aa9f16454daca8fab8713a3649a459 11175210 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121075/I12991.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121075/I12991.1240k.bam.bai -I13458 half ds SAMEA114441097 PRJEB66422 ERR12121077 I13458 ERS16428881 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I13458 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/077/ERR12121077/ERR12121077.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/077/ERR12121077/ERR12121077.fastq.gz 491508492 0bd78de6a5b34e765042160b7756b4b8 16599256 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121077/I13458.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121077/I13458.1240k.bam.bai -I15232 half ds SAMEA114441098 PRJEB66422 ERR12121079 I15232 ERS16428882 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15232 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/079/ERR12121079/ERR12121079.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/079/ERR12121079/ERR12121079.fastq.gz 493806220 e72e33b7a9bab2be33bb19cd3a5ff083 15497958 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121079/I15232.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121079/I15232.1240k.bam.bai -I15485 half ds SAMEA114440974 PRJEB66422 ERR12121081 I15485 ERS16428758 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15485 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/081/ERR12121081/ERR12121081.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/081/ERR12121081/ERR12121081.fastq.gz 6183497 caf54ab824305825628969d67df1827b 251211 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121081/I15485.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121081/I15485.1240k.bam.bai -I15486 half ds SAMEA114440987 PRJEB66422 ERR12121083 I15486 ERS16428771 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15486 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/083/ERR12121083/ERR12121083.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/083/ERR12121083/ERR12121083.fastq.gz 80310157 33b88244404286a1ae30257999479d8a 2147417 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121083/I15486.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121083/I15486.1240k.bam.bai -I15487 half ds SAMEA114441001 PRJEB66422 ERR12121085 I15487 ERS16428785 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15487 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/085/ERR12121085/ERR12121085.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/085/ERR12121085/ERR12121085.fastq.gz 16598966 2fc82a8f62a00e9becc7ae37a3904623 505869 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121085/I15487.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121085/I15487.1240k.bam.bai -I15488 half ds SAMEA114441002 PRJEB66422 ERR12121087 I15488 ERS16428786 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15488 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/087/ERR12121087/ERR12121087.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/087/ERR12121087/ERR12121087.fastq.gz 144282033 4fbb48f409aacdc183e5a99cb73c854c 3845406 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121087/I15488.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121087/I15488.1240k.bam.bai -I15489 half ds SAMEA114441003 PRJEB66422 ERR12121089 I15489 ERS16428787 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15489 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/089/ERR12121089/ERR12121089.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/089/ERR12121089/ERR12121089.fastq.gz 89549566 08709ec7c0064329fbf05ff33ddd8ec9 2483784 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121089/I15489.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121089/I15489.1240k.bam.bai -I15490 half ds SAMEA114440988 PRJEB66422 ERR12121091 I15490 ERS16428772 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15490 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/091/ERR12121091/ERR12121091.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/091/ERR12121091/ERR12121091.fastq.gz 61121829 48287f5f0337cf98a2aa8a4e0fc29897 1693576 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121091/I15490.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121091/I15490.1240k.bam.bai -I15491 half ds SAMEA114440989 PRJEB66422 ERR12121093 I15491 ERS16428773 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15491 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/093/ERR12121093/ERR12121093.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/093/ERR12121093/ERR12121093.fastq.gz 17569346 0cc9eaec2b1828fe0250d1dba0270791 678052 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121093/I15491.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121093/I15491.1240k.bam.bai -I15492 half ds SAMEA114440990 PRJEB66422 ERR12121095 I15492 ERS16428774 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15492 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/095/ERR12121095/ERR12121095.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/095/ERR12121095/ERR12121095.fastq.gz 146142753 7d7e08ea08ff7097e723027d75997150 4022397 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121095/I15492.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121095/I15492.1240k.bam.bai -I15493 half ds SAMEA114440970 PRJEB66422 ERR12121097 I15493 ERS16428754 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15493 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/097/ERR12121097/ERR12121097.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/097/ERR12121097/ERR12121097.fastq.gz 6144867 ea439276c3546d9ab1d63571e4bbb0e4 269516 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121097/I15493.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121097/I15493.1240k.bam.bai -I15494 half ds SAMEA114440991 PRJEB66422 ERR12121099 I15494 ERS16428775 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15494 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/099/ERR12121099/ERR12121099.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/099/ERR12121099/ERR12121099.fastq.gz 50866460 dd5f25b71e12927a1f89f79f5874cfda 1729831 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121099/I15494.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121099/I15494.1240k.bam.bai -I15495 half ds SAMEA114440992 PRJEB66422 ERR12121101 I15495 ERS16428776 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15495 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/001/ERR12121101/ERR12121101.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/001/ERR12121101/ERR12121101.fastq.gz 80958683 a86f3703d9e99c49d3ad2b420dadbd5a 2249283 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121101/I15495.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121101/I15495.1240k.bam.bai -I15496 half ds SAMEA114441101 PRJEB66422 ERR12121103 I15496 ERS16428885 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15496 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/003/ERR12121103/ERR12121103.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/003/ERR12121103/ERR12121103.fastq.gz 18133948 fbdbb381423053a379cfa91759b69567 616117 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121103/I15496.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121103/I15496.1240k.bam.bai -I15497 half ds SAMEA114440975 PRJEB66422 ERR12121105 I15497 ERS16428759 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15497 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/005/ERR12121105/ERR12121105.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/005/ERR12121105/ERR12121105.fastq.gz 8661102 094ad3f6cf04a14a9ec056eeac435173 395422 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121105/I15497.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121105/I15497.1240k.bam.bai -I15498 half ds SAMEA114440971 PRJEB66422 ERR12121107 I15498 ERS16428755 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15498 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/007/ERR12121107/ERR12121107.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/007/ERR12121107/ERR12121107.fastq.gz 9298873 a59177758be3eca45e1570cc176c9c8b 394713 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121107/I15498.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121107/I15498.1240k.bam.bai -I15499 half ds SAMEA114440993 PRJEB66422 ERR12121109 I15499 ERS16428777 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15499 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/009/ERR12121109/ERR12121109.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/009/ERR12121109/ERR12121109.fastq.gz 16200386 6d52597b2ddcc5f870cc08924a39a8db 566785 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121109/I15499.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121109/I15499.1240k.bam.bai -I15500 half ds SAMEA114441004 PRJEB66422 ERR12121111 I15500 ERS16428788 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15500 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/011/ERR12121111/ERR12121111.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/011/ERR12121111/ERR12121111.fastq.gz 26060979 d253756115c38fadfadf675c962b32bb 835520 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121111/I15500.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121111/I15500.1240k.bam.bai -I15501 half ds SAMEA114440972 PRJEB66422 ERR12121113 I15501 ERS16428756 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15501 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/013/ERR12121113/ERR12121113.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/013/ERR12121113/ERR12121113.fastq.gz 6362964 27cc8038d62b76662d6bb0027307699f 231300 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121113/I15501.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121113/I15501.1240k.bam.bai -I15502 half ds SAMEA114440994 PRJEB66422 ERR12121115 I15502 ERS16428778 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15502 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/015/ERR12121115/ERR12121115.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/015/ERR12121115/ERR12121115.fastq.gz 38829166 54e76de521138ca09e9f2d42df5d3c96 1127317 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121115/I15502.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121115/I15502.1240k.bam.bai -I15503 half ds SAMEA114441102 PRJEB66422 ERR12121117 I15503 ERS16428886 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15503 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/017/ERR12121117/ERR12121117.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/017/ERR12121117/ERR12121117.fastq.gz 16596571 6ebacf13db7814eb876f16f11fbfd915 586204 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121117/I15503.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121117/I15503.1240k.bam.bai -I15504 half ds SAMEA114441005 PRJEB66422 ERR12121119 I15504 ERS16428789 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15504 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/019/ERR12121119/ERR12121119.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/019/ERR12121119/ERR12121119.fastq.gz 168870714 fa13ec49f7b9745fed314d76146ce811 4399363 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121119/I15504.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121119/I15504.1240k.bam.bai -I15505 half ds SAMEA114440976 PRJEB66422 ERR12121121 I15505 ERS16428760 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15505 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/021/ERR12121121/ERR12121121.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/021/ERR12121121/ERR12121121.fastq.gz 5725112 9af78de9d8f57f1823b2c4bb3e9cede2 243955 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121121/I15505.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121121/I15505.1240k.bam.bai -I15507 half ds SAMEA114441006 PRJEB66422 ERR12121124 I15507 ERS16428790 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15507 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/024/ERR12121124/ERR12121124.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/024/ERR12121124/ERR12121124.fastq.gz 80915185 1af1e54e955b725e8551b78b535caea2 2230991 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121124/I15507.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121124/I15507.1240k.bam.bai -I15508 half ds SAMEA114441007 PRJEB66422 ERR12121126 I15508 ERS16428791 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15508 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/026/ERR12121126/ERR12121126.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/026/ERR12121126/ERR12121126.fastq.gz 127807973 703f459be9ee8f1994a3df055b3c9316 3081498 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121126/I15508.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121126/I15508.1240k.bam.bai -I15509 half ds SAMEA114440995 PRJEB66422 ERR12121128 I15509 ERS16428779 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15509 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/028/ERR12121128/ERR12121128.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/028/ERR12121128/ERR12121128.fastq.gz 19310903 d216634bdd0f9624e0bc14241910a27c 639048 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121128/I15509.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121128/I15509.1240k.bam.bai -I15510 half ds SAMEA114440996 PRJEB66422 ERR12121130 I15510 ERS16428780 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15510 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/030/ERR12121130/ERR12121130.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/030/ERR12121130/ERR12121130.fastq.gz 169160429 cafb5bf635b2fcefcb7869c652452d1b 5692560 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121130/I15510.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121130/I15510.1240k.bam.bai -I15511 half ds SAMEA114441100 PRJEB66422 ERR12121132 I15511 ERS16428884 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15511 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/032/ERR12121132/ERR12121132.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/032/ERR12121132/ERR12121132.fastq.gz 16590081 55777b74becd229c849b276cb7f7c29c 679006 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121132/I15511.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121132/I15511.1240k.bam.bai -I15512 half ds SAMEA114440973 PRJEB66422 ERR12121134 I15512 ERS16428757 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15512 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/034/ERR12121134/ERR12121134.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/034/ERR12121134/ERR12121134.fastq.gz 7935269 bdc1d07f49e34b2eec67c75eb3a6069f 332146 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121134/I15512.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121134/I15512.1240k.bam.bai -I15513 half ds SAMEA114441008 PRJEB66422 ERR12121136 I15513 ERS16428792 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15513 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/036/ERR12121136/ERR12121136.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/036/ERR12121136/ERR12121136.fastq.gz 103287507 4c46939e90bb321eb4111b799ba5833c 2733636 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121136/I15513.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121136/I15513.1240k.bam.bai -I15514 half ds SAMEA114440997 PRJEB66422 ERR12121138 I15514 ERS16428781 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15514 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/038/ERR12121138/ERR12121138.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/038/ERR12121138/ERR12121138.fastq.gz 42452315 fd04fdf968152665227217edfcea2355 1199938 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121138/I15514.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121138/I15514.1240k.bam.bai -I15515 half ds SAMEA114440998 PRJEB66422 ERR12121140 I15515 ERS16428782 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15515 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/040/ERR12121140/ERR12121140.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/040/ERR12121140/ERR12121140.fastq.gz 22570000 bc7a5e3814fc9b073bd8db305b534103 702819 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121140/I15515.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121140/I15515.1240k.bam.bai -I15516 half ds SAMEA114440999 PRJEB66422 ERR12121142 I15516 ERS16428783 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15516 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/042/ERR12121142/ERR12121142.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/042/ERR12121142/ERR12121142.fastq.gz 45328802 11eeaff3784411fea7ae1fb2af594e79 1156850 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121142/I15516.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121142/I15516.1240k.bam.bai -I15517 half ds SAMEA114441000 PRJEB66422 ERR12121144 I15517 ERS16428784 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15517 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/044/ERR12121144/ERR12121144.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/044/ERR12121144/ERR12121144.fastq.gz 41442038 2fb3ed9306dab681f1aea0719d1041ec 1468019 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121144/I15517.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121144/I15517.1240k.bam.bai -I15518 half ds SAMEA114441009 PRJEB66422 ERR12121146 I15518 ERS16428793 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15518 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/046/ERR12121146/ERR12121146.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/046/ERR12121146/ERR12121146.fastq.gz 66821402 0481fa4fbf078dd2347eb571fb0dc22f 1884471 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121146/I15518.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121146/I15518.1240k.bam.bai -I15519 half ds SAMEA114440977 PRJEB66422 ERR12121148 I15519 ERS16428761 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15519 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/048/ERR12121148/ERR12121148.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/048/ERR12121148/ERR12121148.fastq.gz 7354728 a981dab7535570ffb6b5171f86b1c19e 331575 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121148/I15519.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121148/I15519.1240k.bam.bai -I15520 half ds SAMEA114441010 PRJEB66422 ERR12121150 I15520 ERS16428794 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15520 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/050/ERR12121150/ERR12121150.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/050/ERR12121150/ERR12121150.fastq.gz 149690254 d80ae2c3eac90590722656bd53972758 3901934 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121150/I15520.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121150/I15520.1240k.bam.bai -I15521 half ds SAMEA114441011 PRJEB66422 ERR12121152 I15521 ERS16428795 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15521 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/052/ERR12121152/ERR12121152.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/052/ERR12121152/ERR12121152.fastq.gz 73394212 5fd57013f21aeafd96459982112c5876 2020832 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121152/I15521.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121152/I15521.1240k.bam.bai -I15522 half ds SAMEA114441012 PRJEB66422 ERR12121154 I15522 ERS16428796 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15522 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/054/ERR12121154/ERR12121154.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/054/ERR12121154/ERR12121154.fastq.gz 76526859 ac57ca49fb0f39d2eff9588bfdfbea79 2137058 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121154/I15522.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121154/I15522.1240k.bam.bai -I15523 half ds SAMEA114441103 PRJEB66422 ERR12121156 I15523 ERS16428887 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15523 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/056/ERR12121156/ERR12121156.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/056/ERR12121156/ERR12121156.fastq.gz 11595349 cfc67d81d8bb61af518aef616461f1d6 434046 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121156/I15523.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121156/I15523.1240k.bam.bai -I15524 half ds SAMEA114441013 PRJEB66422 ERR12121158 I15524 ERS16428797 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15524 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/058/ERR12121158/ERR12121158.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/058/ERR12121158/ERR12121158.fastq.gz 51335241 54d9b2215442a82bf295743ba87713a1 1434938 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121158/I15524.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121158/I15524.1240k.bam.bai -I15525 half ds SAMEA114441014 PRJEB66422 ERR12121160 I15525 ERS16428798 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15525 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/060/ERR12121160/ERR12121160.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/060/ERR12121160/ERR12121160.fastq.gz 83182092 a28abfd37e4a32d5fbe354b2149b02c4 2155461 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121160/I15525.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121160/I15525.1240k.bam.bai -I15526 half ds SAMEA114441015 PRJEB66422 ERR12121162 I15526 ERS16428799 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15526 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/062/ERR12121162/ERR12121162.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/062/ERR12121162/ERR12121162.fastq.gz 52922457 49b2d69f27a19a72d513c7af27241c1b 1319344 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121162/I15526.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121162/I15526.1240k.bam.bai -I15527 half ds SAMEA114440979 PRJEB66422 ERR12121164 I15527 ERS16428763 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15527 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/064/ERR12121164/ERR12121164.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/064/ERR12121164/ERR12121164.fastq.gz 184998381 35ebdb45c50baf2851ab236be97bed29 5128531 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121164/I15527.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121164/I15527.1240k.bam.bai -I15528 half ds SAMEA114440980 PRJEB66422 ERR12121166 I15528 ERS16428764 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15528 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/066/ERR12121166/ERR12121166.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/066/ERR12121166/ERR12121166.fastq.gz 75920477 011f9006f545b770566535c4fa0b1357 2058556 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121166/I15528.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121166/I15528.1240k.bam.bai -I15529 half ds SAMEA114440981 PRJEB66422 ERR12121168 I15529 ERS16428765 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15529 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/068/ERR12121168/ERR12121168.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/068/ERR12121168/ERR12121168.fastq.gz 98505828 7e6323c037a215f0eebbe041cf908937 2995282 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121168/I15529.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121168/I15529.1240k.bam.bai -I15530 half ds SAMEA114440968 PRJEB66422 ERR12121170 I15530 ERS16428752 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15530 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/070/ERR12121170/ERR12121170.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/070/ERR12121170/ERR12121170.fastq.gz 8394992 f45f43742e9380bd83ed850872dd221a 348300 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121170/I15530.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121170/I15530.1240k.bam.bai -I15531 half ds SAMEA114440982 PRJEB66422 ERR12121172 I15531 ERS16428766 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15531 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/072/ERR12121172/ERR12121172.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/072/ERR12121172/ERR12121172.fastq.gz 77561209 4265bf3f4b2c14162b4f4097e19f1e74 2531481 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121172/I15531.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121172/I15531.1240k.bam.bai -I15532 half ds SAMEA114440983 PRJEB66422 ERR12121174 I15532 ERS16428767 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15532 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/074/ERR12121174/ERR12121174.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/074/ERR12121174/ERR12121174.fastq.gz 53575918 20209901c0712037350d73eeb02cc312 1967194 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121174/I15532.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121174/I15532.1240k.bam.bai -I15533 half ds SAMEA114440984 PRJEB66422 ERR12121176 I15533 ERS16428768 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15533 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/076/ERR12121176/ERR12121176.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/076/ERR12121176/ERR12121176.fastq.gz 48987908 e41c2da976d39d2033b1b9531276c0bf 1400567 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121176/I15533.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121176/I15533.1240k.bam.bai -I15534 half ds SAMEA114440985 PRJEB66422 ERR12121178 I15534 ERS16428769 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15534 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/078/ERR12121178/ERR12121178.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/078/ERR12121178/ERR12121178.fastq.gz 21807100 011555a67d35187f67e17d6299d18876 691304 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121178/I15534.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121178/I15534.1240k.bam.bai -I15535 half ds SAMEA114440986 PRJEB66422 ERR12121180 I15535 ERS16428770 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15535 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/080/ERR12121180/ERR12121180.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/080/ERR12121180/ERR12121180.fastq.gz 35923023 abe6759a10a8f14cef46311cccddeb90 1118308 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121180/I15535.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121180/I15535.1240k.bam.bai -I15536 half ds SAMEA114440969 PRJEB66422 ERR12121182 I15536 ERS16428753 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15536 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/082/ERR12121182/ERR12121182.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/082/ERR12121182/ERR12121182.fastq.gz 7012932 ae08f29e2c23a4f424b02021e299739f 291539 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121182/I15536.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121182/I15536.1240k.bam.bai -I15537 half ds SAMEA114441031 PRJEB66422 ERR12121184 I15537 ERS16428815 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15537 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/084/ERR12121184/ERR12121184.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/084/ERR12121184/ERR12121184.fastq.gz 113089012 d70f05f3510bbbef050102c27300561c 3639751 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121184/I15537.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121184/I15537.1240k.bam.bai -I15538 half ds SAMEA114441032 PRJEB66422 ERR12121186 I15538 ERS16428816 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15538_1240k OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/086/ERR12121186/ERR12121186.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/086/ERR12121186/ERR12121186.fastq.gz 16630624 9cb7a4e6fea14be674bd27b0a48aacb5 544337 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121186/I15538_1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121186/I15538_1240k.bam.bai -I15539 half ds SAMEA114498459 PRJEB66422 ERR12121189 I15539 ERS16480113 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15539_1240k OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/089/ERR12121189/ERR12121189.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/089/ERR12121189/ERR12121189.fastq.gz 120237080 6b714d3ee8ca4211153f5e88458921fb 3883344 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121189/I15539_1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121189/I15539_1240k.bam.bai -I15540 half ds SAMEA114441033 PRJEB66422 ERR12121192 I15540 ERS16428817 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15540 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/092/ERR12121192/ERR12121192.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/092/ERR12121192/ERR12121192.fastq.gz 168810388 705bb75891a1fb95323048655539d66b 4788589 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121192/I15540.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121192/I15540.1240k.bam.bai -I15541 half ds SAMEA114441034 PRJEB66422 ERR12121194 I15541 ERS16428818 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15541 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/094/ERR12121194/ERR12121194.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/094/ERR12121194/ERR12121194.fastq.gz 104374112 4a59d6c34398d750f74dbe9a4d1b1899 3045126 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121194/I15541.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121194/I15541.1240k.bam.bai -I15542 half ds SAMEA114441035 PRJEB66422 ERR12121196 I15542 ERS16428819 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15542 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/096/ERR12121196/ERR12121196.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/096/ERR12121196/ERR12121196.fastq.gz 135002922 df0ffc79f1390736b411a43e7daacc66 3597760 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121196/I15542.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121196/I15542.1240k.bam.bai -I15543 half ds SAMEA114441036 PRJEB66422 ERR12121198 I15543 ERS16428820 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15543 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/098/ERR12121198/ERR12121198.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/098/ERR12121198/ERR12121198.fastq.gz 202391775 a6935768dba6b139655a2bb6b1006251 6683794 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121198/I15543.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121198/I15543.1240k.bam.bai -I15544 half ds SAMEA114441021 PRJEB66422 ERR12121200 I15544 ERS16428805 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15544 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/000/ERR12121200/ERR12121200.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/000/ERR12121200/ERR12121200.fastq.gz 123113214 b7acb69846f23a6779d7ec70d66f39cf 3440970 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121200/I15544.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121200/I15544.1240k.bam.bai -I15545 half ds SAMEA114441022 PRJEB66422 ERR12121202 I15545 ERS16428806 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15545 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/002/ERR12121202/ERR12121202.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/002/ERR12121202/ERR12121202.fastq.gz 179643294 1f3d5f492b2883535fe38bec09e493ec 5148383 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121202/I15545.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121202/I15545.1240k.bam.bai -I15546 half ds SAMEA114441023 PRJEB66422 ERR12121204 I15546 ERS16428807 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15546 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/004/ERR12121204/ERR12121204.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/004/ERR12121204/ERR12121204.fastq.gz 87723856 4962eca3c4c357d6ec5d3d3d433a0738 2770074 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121204/I15546.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121204/I15546.1240k.bam.bai -I15547 half ds SAMEA114441024 PRJEB66422 ERR12121206 I15547 ERS16428808 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15547 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/006/ERR12121206/ERR12121206.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/006/ERR12121206/ERR12121206.fastq.gz 25231800 ef01b52a9f1e2f2e23db2d3a25dbcbc7 1010760 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121206/I15547.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121206/I15547.1240k.bam.bai -I15548 half ds SAMEA114441025 PRJEB66422 ERR12121208 I15548 ERS16428809 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15548 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/008/ERR12121208/ERR12121208.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/008/ERR12121208/ERR12121208.fastq.gz 113852679 5b30930b01de746ed8d7ce0baa208189 3066977 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121208/I15548.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121208/I15548.1240k.bam.bai -I15549 half ds SAMEA114441037 PRJEB66422 ERR12121210 I15549 ERS16428821 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15549 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/010/ERR12121210/ERR12121210.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/010/ERR12121210/ERR12121210.fastq.gz 114800980 0afe1d1c8f41281025ab85aee03149a3 3943515 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121210/I15549.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121210/I15549.1240k.bam.bai -I15550 half ds SAMEA114440978 PRJEB66422 ERR12121212 I15550 ERS16428762 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15550 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/012/ERR12121212/ERR12121212.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/012/ERR12121212/ERR12121212.fastq.gz 11364571 b3df1a1f41c8c1ca43cbc99fde9c2ae8 438774 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121212/I15550.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121212/I15550.1240k.bam.bai -I15551 half ds SAMEA114441026 PRJEB66422 ERR12121214 I15551 ERS16428810 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15551 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/014/ERR12121214/ERR12121214.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/014/ERR12121214/ERR12121214.fastq.gz 85637321 1fc654c64a2e935876c12b0b21cc3a7f 2764167 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121214/I15551.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121214/I15551.1240k.bam.bai -I15552 half ds SAMEA114441027 PRJEB66422 ERR12121216 I15552 ERS16428811 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15552 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/016/ERR12121216/ERR12121216.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/016/ERR12121216/ERR12121216.fastq.gz 75326036 aa4757d0641d15db3351dfb2ef40c2b1 2372198 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121216/I15552.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121216/I15552.1240k.bam.bai -I15553 half ds SAMEA114441028 PRJEB66422 ERR12121218 I15553 ERS16428812 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15553 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/018/ERR12121218/ERR12121218.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/018/ERR12121218/ERR12121218.fastq.gz 97961366 c39daf8fd7744944b632f6309ef74989 2710210 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121218/I15553.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121218/I15553.1240k.bam.bai -I15554 half ds SAMEA114441029 PRJEB66422 ERR12121220 I15554 ERS16428813 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15554 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/020/ERR12121220/ERR12121220.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/020/ERR12121220/ERR12121220.fastq.gz 43808971 bfff66109c4f3cb68494176d2e5092d9 1354241 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121220/I15554.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121220/I15554.1240k.bam.bai -I15555 half ds SAMEA114441030 PRJEB66422 ERR12121222 I15555 ERS16428814 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I15555 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/022/ERR12121222/ERR12121222.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/022/ERR12121222/ERR12121222.fastq.gz 80027955 05a0d5a028f3cbeb995e3ff49bfd8087 2244925 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121222/I15555.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121222/I15555.1240k.bam.bai -I24343 half ds SAMEA114493313 PRJEB66422 ERR12121225 I24343 ERS16474971 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I24343 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/025/ERR12121225/ERR12121225.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/025/ERR12121225/ERR12121225.fastq.gz 49450549 9e5c6b77aef9a0518c62e2ebb465eec8 2053698 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121225/I24343.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121225/I24343.1240k.bam.bai -I26702 half ds SAMEA114441038 PRJEB66422 ERR12121227 I26702 ERS16428822 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26702 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/027/ERR12121227/ERR12121227.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/027/ERR12121227/ERR12121227.fastq.gz 471091613 b1da86ac27b9ed3b05a820f55c41cb6c 17545212 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121227/I26702.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121227/I26702.1240k.bam.bai -I26703 half ds SAMEA114441040 PRJEB66422 ERR12121229 I26703 ERS16428824 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26703 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/029/ERR12121229/ERR12121229.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/029/ERR12121229/ERR12121229.fastq.gz 555878549 a63282b254d1fbe70d237e1c0d9791e7 20977195 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121229/I26703.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121229/I26703.1240k.bam.bai -I26704 half ds SAMEA114441041 PRJEB66422 ERR12121231 I26704 ERS16428825 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26704 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/031/ERR12121231/ERR12121231.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/031/ERR12121231/ERR12121231.fastq.gz 526361362 7f69030be26739b39ceb8128cfb576ea 20070259 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121231/I26704.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121231/I26704.1240k.bam.bai -I26705 half ds SAMEA114441042 PRJEB66422 ERR12121233 I26705 ERS16428826 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26705 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/033/ERR12121233/ERR12121233.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/033/ERR12121233/ERR12121233.fastq.gz 262669706 a355b47a712975ba7aebd4bdaf364965 10217173 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121233/I26705.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121233/I26705.1240k.bam.bai -I26707 half ds SAMEA114441043 PRJEB66422 ERR12121235 I26707 ERS16428827 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26707 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/035/ERR12121235/ERR12121235.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/035/ERR12121235/ERR12121235.fastq.gz 454754916 547693fe47f332b456c4e88db6f167a0 17254017 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121235/I26707.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121235/I26707.1240k.bam.bai -I26708 half ds SAMEA114441039 PRJEB66422 ERR12121237 I26708 ERS16428823 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26708 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/037/ERR12121237/ERR12121237.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/037/ERR12121237/ERR12121237.fastq.gz 568618052 b8ef85e7eb2891254dcb196659132857 21340993 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121237/I26708.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121237/I26708.1240k.bam.bai -I26709 half ds SAMEA114441044 PRJEB66422 ERR12121239 I26709 ERS16428828 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26709 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/039/ERR12121239/ERR12121239.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/039/ERR12121239/ERR12121239.fastq.gz 557323024 b6cceeac0f1668f5ba4450643f2b35c3 20932200 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121239/I26709.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121239/I26709.1240k.bam.bai -I26714 half ds SAMEA114441045 PRJEB66422 ERR12121241 I26714 ERS16428829 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26714 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/041/ERR12121241/ERR12121241.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/041/ERR12121241/ERR12121241.fastq.gz 767885949 532dee3354662391920d9d097cabc566 30127993 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121241/I26714.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121241/I26714.1240k.bam.bai -I26718 half ds SAMEA114441046 PRJEB66422 ERR12121243 I26718 ERS16428830 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26718 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/043/ERR12121243/ERR12121243.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/043/ERR12121243/ERR12121243.fastq.gz 133657528 cb45da842ae17d76468fd4d2d3f2f6c4 4773871 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121243/I26718.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121243/I26718.1240k.bam.bai -I26719 half ds SAMEA114441047 PRJEB66422 ERR12121245 I26719 ERS16428831 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26719 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/045/ERR12121245/ERR12121245.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/045/ERR12121245/ERR12121245.fastq.gz 201344683 39737d1ce69fab42cb28f3aacadeaca1 7113158 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121245/I26719.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121245/I26719.1240k.bam.bai -I26745 half ds SAMEA114441048 PRJEB66422 ERR12121247 I26745 ERS16428832 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26745 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/047/ERR12121247/ERR12121247.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/047/ERR12121247/ERR12121247.fastq.gz 760488915 ee3d9c950c9b9410189c5fe53b0358d3 28520484 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121247/I26745.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121247/I26745.1240k.bam.bai -I26746 half ds SAMEA114441049 PRJEB66422 ERR12121249 I26746 ERS16428833 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26746 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/049/ERR12121249/ERR12121249.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/049/ERR12121249/ERR12121249.fastq.gz 708226900 ded32967a036fe96f4ca916aac0cf62e 26718182 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121249/I26746.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121249/I26746.1240k.bam.bai -I26747 half ds SAMEA114441050 PRJEB66422 ERR12121251 I26747 ERS16428834 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26747 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/051/ERR12121251/ERR12121251.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/051/ERR12121251/ERR12121251.fastq.gz 780484292 d66a62cfd6a7fdae7b513ef5b82cb833 29855591 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121251/I26747.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121251/I26747.1240k.bam.bai -I26748 half ds SAMEA114441051 PRJEB66422 ERR12121253 I26748 ERS16428835 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26748 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/053/ERR12121253/ERR12121253.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/053/ERR12121253/ERR12121253.fastq.gz 487355041 3b7e2ddff5a53aebeec7b15943978026 18835501 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121253/I26748.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121253/I26748.1240k.bam.bai -I26749 half ds SAMEA114441052 PRJEB66422 ERR12121255 I26749 ERS16428836 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26749 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/055/ERR12121255/ERR12121255.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/055/ERR12121255/ERR12121255.fastq.gz 324130807 282f7b228534eee65a4aae4feef6eed5 12641344 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121255/I26749.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121255/I26749.1240k.bam.bai -I26750 half ds SAMEA114441053 PRJEB66422 ERR12121257 I26750 ERS16428837 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26750 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/057/ERR12121257/ERR12121257.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/057/ERR12121257/ERR12121257.fastq.gz 762104866 2a0e699fb347c8e02b3f0c6f13b7e2a7 28912318 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121257/I26750.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121257/I26750.1240k.bam.bai -I26751 half ds SAMEA114441054 PRJEB66422 ERR12121259 I26751 ERS16428838 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26751 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/059/ERR12121259/ERR12121259.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/059/ERR12121259/ERR12121259.fastq.gz 309680718 c6f26d63f68189bb5bc849d5cb91ac8a 10043350 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121259/I26751.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121259/I26751.1240k.bam.bai -I26752 half ds SAMEA114441055 PRJEB66422 ERR12121261 I26752 ERS16428839 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26752 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/061/ERR12121261/ERR12121261.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/061/ERR12121261/ERR12121261.fastq.gz 695553810 0174b1a3699c88d1875a668a86855f21 26077749 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121261/I26752.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121261/I26752.1240k.bam.bai -I26753 half ds SAMEA114441056 PRJEB66422 ERR12121263 I26753 ERS16428840 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26753 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/063/ERR12121263/ERR12121263.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/063/ERR12121263/ERR12121263.fastq.gz 798756331 f3425f729fa9ac2bddeee6d70bd1bd84 30767759 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121263/I26753.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121263/I26753.1240k.bam.bai -I26754 half ds SAMEA114441057 PRJEB66422 ERR12121265 I26754 ERS16428841 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26754 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/065/ERR12121265/ERR12121265.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/065/ERR12121265/ERR12121265.fastq.gz 210289562 8e50efcc4903059e79ba2ecaec87ca83 7094713 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121265/I26754.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121265/I26754.1240k.bam.bai -I26761 half ds SAMEA114441058 PRJEB66422 ERR12121267 I26761 ERS16428842 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26761 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/067/ERR12121267/ERR12121267.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/067/ERR12121267/ERR12121267.fastq.gz 35067822 21d13c31d0c6dac7a9cc7794af9a43dd 1386969 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121267/I26761.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121267/I26761.1240k.bam.bai -I26762 half ds SAMEA114441059 PRJEB66422 ERR12121269 I26762 ERS16428843 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26762 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/069/ERR12121269/ERR12121269.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/069/ERR12121269/ERR12121269.fastq.gz 362720904 d94dc958034c693a423e3fc23d511120 13395647 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121269/I26762.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121269/I26762.1240k.bam.bai -I26763 half ds SAMEA114441060 PRJEB66422 ERR12121271 I26763 ERS16428844 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26763 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/071/ERR12121271/ERR12121271.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/071/ERR12121271/ERR12121271.fastq.gz 738745526 9e8fe8ededfdedd1824503c78f8adf48 28606725 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121271/I26763.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121271/I26763.1240k.bam.bai -I26764 half ds SAMEA114441061 PRJEB66422 ERR12121273 I26764 ERS16428845 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26764 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/073/ERR12121273/ERR12121273.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/073/ERR12121273/ERR12121273.fastq.gz 763564086 8ec3346976df4b90adedcec2d8a86ebf 29307399 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121273/I26764.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121273/I26764.1240k.bam.bai -I26765 half ds SAMEA114441065 PRJEB66422 ERR12121275 I26765 ERS16428849 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26765 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/075/ERR12121275/ERR12121275.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/075/ERR12121275/ERR12121275.fastq.gz 689001996 9775f459111b5ea5b4561e0e31ece54a 25974064 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121275/I26765.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121275/I26765.1240k.bam.bai -I26766 half ds SAMEA114441066 PRJEB66422 ERR12121277 I26766 ERS16428850 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26766 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/077/ERR12121277/ERR12121277.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/077/ERR12121277/ERR12121277.fastq.gz 628830782 eb0b66441f95118f22a6d96279244160 23572671 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121277/I26766.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121277/I26766.1240k.bam.bai -I26767 half ds SAMEA114441067 PRJEB66422 ERR12121279 I26767 ERS16428851 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26767 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/079/ERR12121279/ERR12121279.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/079/ERR12121279/ERR12121279.fastq.gz 341740072 872069008f5dc1bcd33eaf33f5a55583 12770762 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121279/I26767.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121279/I26767.1240k.bam.bai -I26775 half ds SAMEA114441068 PRJEB66422 ERR12121281 I26775 ERS16428852 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26775 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/081/ERR12121281/ERR12121281.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/081/ERR12121281/ERR12121281.fastq.gz 490195604 f5d1436e8cc9b26e07a44ab7d553df31 15754812 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121281/I26775.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121281/I26775.1240k.bam.bai -I26776 half ds SAMEA114441069 PRJEB66422 ERR12121283 I26776 ERS16428853 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26776 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/083/ERR12121283/ERR12121283.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/083/ERR12121283/ERR12121283.fastq.gz 326592154 c0fb643df3993f2ac455c85518d36552 11914574 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121283/I26776.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121283/I26776.1240k.bam.bai -I26894 half ds SAMEA114441070 PRJEB66422 ERR12121285 I26894 ERS16428854 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26894 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/085/ERR12121285/ERR12121285.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/085/ERR12121285/ERR12121285.fastq.gz 601611339 dd82aa58e63502fde90780957e92c0de 21728593 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121285/I26894.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121285/I26894.1240k.bam.bai -I26895 half ds SAMEA114441071 PRJEB66422 ERR12121287 I26895 ERS16428855 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26895 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/087/ERR12121287/ERR12121287.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/087/ERR12121287/ERR12121287.fastq.gz 490247939 ac3bbad7afab1b9a7c9c5215b67fa4a5 18148115 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121287/I26895.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121287/I26895.1240k.bam.bai -I26897 half ds SAMEA114441072 PRJEB66422 ERR12121289 I26897 ERS16428856 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I26897 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/089/ERR12121289/ERR12121289.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/089/ERR12121289/ERR12121289.fastq.gz 778942908 d0d78c2ec9599efef0abd1898b4fe683 30169332 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121289/I26897.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121289/I26897.1240k.bam.bai -I27295 half ds SAMEA114441073 PRJEB66422 ERR12121291 I27295 ERS16428857 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I27295 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/091/ERR12121291/ERR12121291.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/091/ERR12121291/ERR12121291.fastq.gz 547155701 192d0706f8c139a8f209498cfbb3deb1 19283621 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121291/I27295.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121291/I27295.1240k.bam.bai -I27296 half ds SAMEA114441074 PRJEB66422 ERR12121293 I27296 ERS16428858 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I27296 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/093/ERR12121293/ERR12121293.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/093/ERR12121293/ERR12121293.fastq.gz 523149141 452ed5ff0cd0ed928e0f6ee369a501a9 18465838 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121293/I27296.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121293/I27296.1240k.bam.bai -I27297 half ds SAMEA114441075 PRJEB66422 ERR12121295 I27297 ERS16428859 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I27297 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/095/ERR12121295/ERR12121295.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/095/ERR12121295/ERR12121295.fastq.gz 571026490 69ba1f7ff7d7f31e1c936f478e264d73 20615772 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121295/I27297.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121295/I27297.1240k.bam.bai -I27298 half ds SAMEA114441076 PRJEB66422 ERR12121297 I27298 ERS16428860 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I27298 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/097/ERR12121297/ERR12121297.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/097/ERR12121297/ERR12121297.fastq.gz 600693203 9d036e4b2cfd27c783db193d4fcb792a 21970602 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121297/I27298.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121297/I27298.1240k.bam.bai -I28388 half ds SAMEA114441077 PRJEB66422 ERR12121299 I28388 ERS16428861 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28388 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/099/ERR12121299/ERR12121299.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/099/ERR12121299/ERR12121299.fastq.gz 683277194 787cc651e88abd6060acfdc5f9e6122c 24693998 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121299/I28388.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121299/I28388.1240k.bam.bai -I28390 half ds SAMEA114441078 PRJEB66422 ERR12121301 I28390 ERS16428862 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28390 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/001/ERR12121301/ERR12121301.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/001/ERR12121301/ERR12121301.fastq.gz 686570268 5befecf0235d4b94b7b8917f40026af7 25356521 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121301/I28390.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121301/I28390.1240k.bam.bai -I28392 half ds SAMEA114441079 PRJEB66422 ERR12121303 I28392 ERS16428863 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28392 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/003/ERR12121303/ERR12121303.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/003/ERR12121303/ERR12121303.fastq.gz 715295432 ed2c21fb2209ab831562bce8fb2bd548 25685154 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121303/I28392.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121303/I28392.1240k.bam.bai -I28393 half ds SAMEA114441080 PRJEB66422 ERR12121305 I28393 ERS16428864 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28393 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/005/ERR12121305/ERR12121305.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/005/ERR12121305/ERR12121305.fastq.gz 645419372 6e5d0d82f20e760249253c298ade5036 23352337 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121305/I28393.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121305/I28393.1240k.bam.bai -I28394 half ds SAMEA114441081 PRJEB66422 ERR12121307 I28394 ERS16428865 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28394 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/007/ERR12121307/ERR12121307.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/007/ERR12121307/ERR12121307.fastq.gz 703310233 a0827c258653832c2f9836ca51eb5472 25066977 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121307/I28394.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121307/I28394.1240k.bam.bai -I28397 half ds SAMEA114441082 PRJEB66422 ERR12121309 I28397 ERS16428866 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28397 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/009/ERR12121309/ERR12121309.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/009/ERR12121309/ERR12121309.fastq.gz 689857585 841d2c8e5eb0233512ccbeffc3d2a351 25536913 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121309/I28397.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121309/I28397.1240k.bam.bai -I28398 half ds SAMEA114441083 PRJEB66422 ERR12121311 I28398 ERS16428867 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28398 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/011/ERR12121311/ERR12121311.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/011/ERR12121311/ERR12121311.fastq.gz 574698444 8e874eb398426985ebf3cbe2575d7cbd 20459395 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121311/I28398.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121311/I28398.1240k.bam.bai -I28400 half ds SAMEA114441084 PRJEB66422 ERR12121313 I28400 ERS16428868 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28400 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/013/ERR12121313/ERR12121313.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/013/ERR12121313/ERR12121313.fastq.gz 605577282 fc7f8e58a4af2d6182165667ebbfb59f 21606182 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121313/I28400.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121313/I28400.1240k.bam.bai -I28446 half ds SAMEA114441062 PRJEB66422 ERR12121315 I28446 ERS16428846 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28446 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/015/ERR12121315/ERR12121315.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/015/ERR12121315/ERR12121315.fastq.gz 308935148 3ebcb76476efbe1f926da8f011227576 10784060 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121315/I28446.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121315/I28446.1240k.bam.bai -I28447 half ds SAMEA114441063 PRJEB66422 ERR12121317 I28447 ERS16428847 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28447 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/017/ERR12121317/ERR12121317.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/017/ERR12121317/ERR12121317.fastq.gz 655471903 87937fcbbc5e4a889f9c771d6cc2c6c7 24693391 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121317/I28447.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121317/I28447.1240k.bam.bai -I28448 half ds SAMEA114441064 PRJEB66422 ERR12121319 I28448 ERS16428848 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I28448 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/019/ERR12121319/ERR12121319.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/019/ERR12121319/ERR12121319.fastq.gz 593855692 1ad9610ae32a3be4c47d2edd7a95a5a5 21393341 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121319/I28448.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121319/I28448.1240k.bam.bai -I32298 half ds SAMEA114441020 PRJEB66422 ERR12121322 I32298 ERS16428804 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I32298 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/022/ERR12121322/ERR12121322.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/022/ERR12121322/ERR12121322.fastq.gz 27885729 e6758826a66f2cf5cf744897f3974f64 1062198 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121322/I32298.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121322/I32298.1240k.bam.bai -I32299 half ds SAMEA114441019 PRJEB66422 ERR12121324 I32299 ERS16428803 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I32299 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/024/ERR12121324/ERR12121324.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/024/ERR12121324/ERR12121324.fastq.gz 112927640 c1a68f80e56831f07ece663043fc8939 3011263 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121324/I32299.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121324/I32299.1240k.bam.bai -I32300 half ds SAMEA114441018 PRJEB66422 ERR12121326 I32300 ERS16428802 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I32300 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/026/ERR12121326/ERR12121326.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/026/ERR12121326/ERR12121326.fastq.gz 129056435 d6f3d2235cbf4d66896f27a82e35f882 3495522 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121326/I32300.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121326/I32300.1240k.bam.bai -I32301 half ds SAMEA114441017 PRJEB66422 ERR12121328 I32301 ERS16428801 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I32301 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/028/ERR12121328/ERR12121328.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/028/ERR12121328/ERR12121328.fastq.gz 21357694 77b339ad939d773ab6463a2a6be59231 655496 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121328/I32301.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121328/I32301.1240k.bam.bai -I32304 half ds SAMEA114441099 PRJEB66422 ERR12121331 I32304 ERS16428883 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I32304 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/031/ERR12121331/ERR12121331.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/031/ERR12121331/ERR12121331.fastq.gz 9103017 566443c18622905ee5082f9b549bda51 326248 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121331/I32304.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121331/I32304.1240k.bam.bai -I32305 half ds SAMEA114441016 PRJEB66422 ERR12121333 I32305 ERS16428800 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I32305 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/033/ERR12121333/ERR12121333.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/033/ERR12121333/ERR12121333.fastq.gz 322104747 83442b10778a45a5dfece82e616b11db 8895583 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121333/I32305.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121333/I32305.1240k.bam.bai -I34800 half ds SAMEA114441085 PRJEB66422 ERR12121335 I34800 ERS16428869 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I34800 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/035/ERR12121335/ERR12121335.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/035/ERR12121335/ERR12121335.fastq.gz 535366972 82ddde6d934b775f437408bc431fb6fc 17127996 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121335/I34800.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121335/I34800.1240k.bam.bai -I34980 half ds SAMEA114441090 PRJEB66422 ERR12121337 I34980 ERS16428874 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I34980 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/037/ERR12121337/ERR12121337.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/037/ERR12121337/ERR12121337.fastq.gz 763057891 cefa36db7471fb5a094eb75a25712dfd 27235737 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121337/I34980.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121337/I34980.1240k.bam.bai -I35008 half ds SAMEA114441094 PRJEB66422 ERR12121339 I35008 ERS16428878 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I35008 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/039/ERR12121339/ERR12121339.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/039/ERR12121339/ERR12121339.fastq.gz 808635595 3d42e71081d09d16bde825a3d54446fb 28966314 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121339/I35008.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121339/I35008.1240k.bam.bai -I35010 half ds SAMEA114441093 PRJEB66422 ERR12121341 I35010 ERS16428877 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I35010 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/041/ERR12121341/ERR12121341.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/041/ERR12121341/ERR12121341.fastq.gz 750431398 6b216608d0207a8257fe560908256bb3 26204311 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121341/I35010.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121341/I35010.1240k.bam.bai -I35012 half ds SAMEA114441089 PRJEB66422 ERR12121343 I35012 ERS16428873 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I35012 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/043/ERR12121343/ERR12121343.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/043/ERR12121343/ERR12121343.fastq.gz 583414524 6838759549e8dc7c6e0eab3336e2b44f 20428429 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121343/I35012.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121343/I35012.1240k.bam.bai -I35014 half ds SAMEA114441091 PRJEB66422 ERR12121345 I35014 ERS16428875 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I35014 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/045/ERR12121345/ERR12121345.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/045/ERR12121345/ERR12121345.fastq.gz 84808278 3a1419ca92868df382719a43d8d2fbfb 2249019 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121345/I35014.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121345/I35014.1240k.bam.bai -I35081 half ds SAMEA114441088 PRJEB66422 ERR12121347 I35081 ERS16428872 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I35081 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/047/ERR12121347/ERR12121347.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/047/ERR12121347/ERR12121347.fastq.gz 906471874 a20df878de2e6138a35885e21b970589 32434999 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121347/I35081.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121347/I35081.1240k.bam.bai -I35095 half ds SAMEA114441092 PRJEB66422 ERR12121349 I35095 ERS16428876 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I35095 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/049/ERR12121349/ERR12121349.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/049/ERR12121349/ERR12121349.fastq.gz 721088772 2ed49834d32fdeff3ebf6e690e58507b 23668108 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121349/I35095.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121349/I35095.1240k.bam.bai -I4664 half ds SAMEA114441104 PRJEB66422 ERR12121352 I4664 ERS16428888 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I4664 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/052/ERR12121352/ERR12121352.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/052/ERR12121352/ERR12121352.fastq.gz 3580897 60ec188beb6de7f564331210f740d423 114821 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121352/I4664.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121352/I4664.1240k.bam.bai -I4803 half ds SAMEA114441095 PRJEB66422 ERR12121354 I4803 ERS16428879 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I4803 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/054/ERR12121354/ERR12121354.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/054/ERR12121354/ERR12121354.fastq.gz 437570957 a9e8dc355123983be74ef4449a9497c1 13503516 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121354/I4803.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121354/I4803.1240k.bam.bai -I5404 plus ss SAMEA114441086 PRJEB66422 ERR12121357 I5404 ERS16428870 2023-12-06 2023-12-06 HiSeq X Ten SINGLE GENOMIC ILLUMINA I5404 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/057/ERR12121357/ERR12121357.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/057/ERR12121357/ERR12121357.fastq.gz 93562642 9c48a3be699b844cd4b77834f31d3716 2761457 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121357/I5404.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121357/I5404.1240k.bam.bai +poseidon_IDs udg library_built sample_accession study_accession run_accession sample_alias secondary_sample_accession first_public last_updated instrument_model library_layout library_source instrument_platform library_name library_strategy fastq_ftp fastq_aspera fastq_bytes fastq_md5 read_count submitted_ftp notes +I1116 half ds SAMEA114441087 PRJEB66422 ERR12121073 I1116 ERS16428871 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I1116 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/073/ERR12121073/ERR12121073.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/073/ERR12121073/ERR12121073.fastq.gz 5018568227 232c2d2e7aa77683fd149c354a952dc3 109682971 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121073/I1116.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121073/I1116.1240k.bam.bai 1240k +I12991 half ds SAMEA114441096 PRJEB66422 ERR12121075 I12991 ERS16428880 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I12991 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/075/ERR12121075/ERR12121075.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/075/ERR12121075/ERR12121075.fastq.gz 383352878 68aa9f16454daca8fab8713a3649a459 11175210 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121075/I12991.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121075/I12991.1240k.bam.bai 1240k +I13458 half ds SAMEA114441097 PRJEB66422 ERR12121077 I13458 ERS16428881 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I13458 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/077/ERR12121077/ERR12121077.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/077/ERR12121077/ERR12121077.fastq.gz 491508492 0bd78de6a5b34e765042160b7756b4b8 16599256 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121077/I13458.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121077/I13458.1240k.bam.bai 1240k +I15232 half ds SAMEA114441098 PRJEB66422 ERR12121079 I15232 ERS16428882 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15232 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/079/ERR12121079/ERR12121079.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/079/ERR12121079/ERR12121079.fastq.gz 493806220 e72e33b7a9bab2be33bb19cd3a5ff083 15497958 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121079/I15232.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121079/I15232.1240k.bam.bai 1240k +I15485 half ds SAMEA114440974 PRJEB66422 ERR12121081 I15485 ERS16428758 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15485 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/081/ERR12121081/ERR12121081.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/081/ERR12121081/ERR12121081.fastq.gz 6183497 caf54ab824305825628969d67df1827b 251211 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121081/I15485.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121081/I15485.1240k.bam.bai 1240k +I15486 half ds SAMEA114440987 PRJEB66422 ERR12121083 I15486 ERS16428771 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15486 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/083/ERR12121083/ERR12121083.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/083/ERR12121083/ERR12121083.fastq.gz 80310157 33b88244404286a1ae30257999479d8a 2147417 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121083/I15486.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121083/I15486.1240k.bam.bai 1240k +I15487 half ds SAMEA114441001 PRJEB66422 ERR12121085 I15487 ERS16428785 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15487 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/085/ERR12121085/ERR12121085.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/085/ERR12121085/ERR12121085.fastq.gz 16598966 2fc82a8f62a00e9becc7ae37a3904623 505869 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121085/I15487.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121085/I15487.1240k.bam.bai 1240k +I15488 half ds SAMEA114441002 PRJEB66422 ERR12121087 I15488 ERS16428786 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15488 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/087/ERR12121087/ERR12121087.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/087/ERR12121087/ERR12121087.fastq.gz 144282033 4fbb48f409aacdc183e5a99cb73c854c 3845406 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121087/I15488.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121087/I15488.1240k.bam.bai 1240k +I15489 half ds SAMEA114441003 PRJEB66422 ERR12121089 I15489 ERS16428787 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15489 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/089/ERR12121089/ERR12121089.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/089/ERR12121089/ERR12121089.fastq.gz 89549566 08709ec7c0064329fbf05ff33ddd8ec9 2483784 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121089/I15489.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121089/I15489.1240k.bam.bai 1240k +I15490 half ds SAMEA114440988 PRJEB66422 ERR12121091 I15490 ERS16428772 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15490 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/091/ERR12121091/ERR12121091.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/091/ERR12121091/ERR12121091.fastq.gz 61121829 48287f5f0337cf98a2aa8a4e0fc29897 1693576 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121091/I15490.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121091/I15490.1240k.bam.bai 1240k +I15491 half ds SAMEA114440989 PRJEB66422 ERR12121093 I15491 ERS16428773 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15491 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/093/ERR12121093/ERR12121093.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/093/ERR12121093/ERR12121093.fastq.gz 17569346 0cc9eaec2b1828fe0250d1dba0270791 678052 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121093/I15491.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121093/I15491.1240k.bam.bai 1240k +I15492 half ds SAMEA114440990 PRJEB66422 ERR12121095 I15492 ERS16428774 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15492 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/095/ERR12121095/ERR12121095.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/095/ERR12121095/ERR12121095.fastq.gz 146142753 7d7e08ea08ff7097e723027d75997150 4022397 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121095/I15492.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121095/I15492.1240k.bam.bai 1240k +I15493 half ds SAMEA114440970 PRJEB66422 ERR12121097 I15493 ERS16428754 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15493 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/097/ERR12121097/ERR12121097.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/097/ERR12121097/ERR12121097.fastq.gz 6144867 ea439276c3546d9ab1d63571e4bbb0e4 269516 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121097/I15493.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121097/I15493.1240k.bam.bai 1240k +I15494 half ds SAMEA114440991 PRJEB66422 ERR12121099 I15494 ERS16428775 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15494 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/099/ERR12121099/ERR12121099.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/099/ERR12121099/ERR12121099.fastq.gz 50866460 dd5f25b71e12927a1f89f79f5874cfda 1729831 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121099/I15494.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121099/I15494.1240k.bam.bai 1240k +I15495 half ds SAMEA114440992 PRJEB66422 ERR12121101 I15495 ERS16428776 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15495 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/001/ERR12121101/ERR12121101.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/001/ERR12121101/ERR12121101.fastq.gz 80958683 a86f3703d9e99c49d3ad2b420dadbd5a 2249283 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121101/I15495.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121101/I15495.1240k.bam.bai 1240k +I15496 half ds SAMEA114441101 PRJEB66422 ERR12121103 I15496 ERS16428885 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15496 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/003/ERR12121103/ERR12121103.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/003/ERR12121103/ERR12121103.fastq.gz 18133948 fbdbb381423053a379cfa91759b69567 616117 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121103/I15496.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121103/I15496.1240k.bam.bai 1240k +I15497 half ds SAMEA114440975 PRJEB66422 ERR12121105 I15497 ERS16428759 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15497 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/005/ERR12121105/ERR12121105.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/005/ERR12121105/ERR12121105.fastq.gz 8661102 094ad3f6cf04a14a9ec056eeac435173 395422 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121105/I15497.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121105/I15497.1240k.bam.bai 1240k +I15498 half ds SAMEA114440971 PRJEB66422 ERR12121107 I15498 ERS16428755 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15498 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/007/ERR12121107/ERR12121107.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/007/ERR12121107/ERR12121107.fastq.gz 9298873 a59177758be3eca45e1570cc176c9c8b 394713 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121107/I15498.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121107/I15498.1240k.bam.bai 1240k +I15499 half ds SAMEA114440993 PRJEB66422 ERR12121109 I15499 ERS16428777 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15499 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/009/ERR12121109/ERR12121109.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/009/ERR12121109/ERR12121109.fastq.gz 16200386 6d52597b2ddcc5f870cc08924a39a8db 566785 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121109/I15499.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121109/I15499.1240k.bam.bai 1240k +I15500 half ds SAMEA114441004 PRJEB66422 ERR12121111 I15500 ERS16428788 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15500 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/011/ERR12121111/ERR12121111.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/011/ERR12121111/ERR12121111.fastq.gz 26060979 d253756115c38fadfadf675c962b32bb 835520 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121111/I15500.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121111/I15500.1240k.bam.bai 1240k +I15501 half ds SAMEA114440972 PRJEB66422 ERR12121113 I15501 ERS16428756 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15501 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/013/ERR12121113/ERR12121113.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/013/ERR12121113/ERR12121113.fastq.gz 6362964 27cc8038d62b76662d6bb0027307699f 231300 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121113/I15501.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121113/I15501.1240k.bam.bai 1240k +I15502 half ds SAMEA114440994 PRJEB66422 ERR12121115 I15502 ERS16428778 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15502 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/015/ERR12121115/ERR12121115.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/015/ERR12121115/ERR12121115.fastq.gz 38829166 54e76de521138ca09e9f2d42df5d3c96 1127317 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121115/I15502.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121115/I15502.1240k.bam.bai 1240k +I15503 half ds SAMEA114441102 PRJEB66422 ERR12121117 I15503 ERS16428886 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15503 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/017/ERR12121117/ERR12121117.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/017/ERR12121117/ERR12121117.fastq.gz 16596571 6ebacf13db7814eb876f16f11fbfd915 586204 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121117/I15503.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121117/I15503.1240k.bam.bai 1240k +I15504 half ds SAMEA114441005 PRJEB66422 ERR12121119 I15504 ERS16428789 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15504 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/019/ERR12121119/ERR12121119.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/019/ERR12121119/ERR12121119.fastq.gz 168870714 fa13ec49f7b9745fed314d76146ce811 4399363 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121119/I15504.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121119/I15504.1240k.bam.bai 1240k +I15505 half ds SAMEA114440976 PRJEB66422 ERR12121121 I15505 ERS16428760 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15505 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/021/ERR12121121/ERR12121121.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/021/ERR12121121/ERR12121121.fastq.gz 5725112 9af78de9d8f57f1823b2c4bb3e9cede2 243955 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121121/I15505.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121121/I15505.1240k.bam.bai 1240k +I15507 half ds SAMEA114441006 PRJEB66422 ERR12121124 I15507 ERS16428790 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15507 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/024/ERR12121124/ERR12121124.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/024/ERR12121124/ERR12121124.fastq.gz 80915185 1af1e54e955b725e8551b78b535caea2 2230991 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121124/I15507.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121124/I15507.1240k.bam.bai 1240k +I15508 half ds SAMEA114441007 PRJEB66422 ERR12121126 I15508 ERS16428791 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15508 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/026/ERR12121126/ERR12121126.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/026/ERR12121126/ERR12121126.fastq.gz 127807973 703f459be9ee8f1994a3df055b3c9316 3081498 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121126/I15508.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121126/I15508.1240k.bam.bai 1240k +I15509 half ds SAMEA114440995 PRJEB66422 ERR12121128 I15509 ERS16428779 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15509 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/028/ERR12121128/ERR12121128.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/028/ERR12121128/ERR12121128.fastq.gz 19310903 d216634bdd0f9624e0bc14241910a27c 639048 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121128/I15509.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121128/I15509.1240k.bam.bai 1240k +I15510 half ds SAMEA114440996 PRJEB66422 ERR12121130 I15510 ERS16428780 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15510 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/030/ERR12121130/ERR12121130.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/030/ERR12121130/ERR12121130.fastq.gz 169160429 cafb5bf635b2fcefcb7869c652452d1b 5692560 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121130/I15510.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121130/I15510.1240k.bam.bai 1240k +I15511 half ds SAMEA114441100 PRJEB66422 ERR12121132 I15511 ERS16428884 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15511 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/032/ERR12121132/ERR12121132.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/032/ERR12121132/ERR12121132.fastq.gz 16590081 55777b74becd229c849b276cb7f7c29c 679006 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121132/I15511.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121132/I15511.1240k.bam.bai 1240k +I15512 half ds SAMEA114440973 PRJEB66422 ERR12121134 I15512 ERS16428757 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15512 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/034/ERR12121134/ERR12121134.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/034/ERR12121134/ERR12121134.fastq.gz 7935269 bdc1d07f49e34b2eec67c75eb3a6069f 332146 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121134/I15512.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121134/I15512.1240k.bam.bai 1240k +I15513 half ds SAMEA114441008 PRJEB66422 ERR12121136 I15513 ERS16428792 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15513 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/036/ERR12121136/ERR12121136.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/036/ERR12121136/ERR12121136.fastq.gz 103287507 4c46939e90bb321eb4111b799ba5833c 2733636 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121136/I15513.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121136/I15513.1240k.bam.bai 1240k +I15514 half ds SAMEA114440997 PRJEB66422 ERR12121138 I15514 ERS16428781 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15514 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/038/ERR12121138/ERR12121138.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/038/ERR12121138/ERR12121138.fastq.gz 42452315 fd04fdf968152665227217edfcea2355 1199938 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121138/I15514.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121138/I15514.1240k.bam.bai 1240k +I15515 half ds SAMEA114440998 PRJEB66422 ERR12121140 I15515 ERS16428782 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15515 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/040/ERR12121140/ERR12121140.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/040/ERR12121140/ERR12121140.fastq.gz 22570000 bc7a5e3814fc9b073bd8db305b534103 702819 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121140/I15515.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121140/I15515.1240k.bam.bai 1240k +I15516 half ds SAMEA114440999 PRJEB66422 ERR12121142 I15516 ERS16428783 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15516 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/042/ERR12121142/ERR12121142.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/042/ERR12121142/ERR12121142.fastq.gz 45328802 11eeaff3784411fea7ae1fb2af594e79 1156850 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121142/I15516.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121142/I15516.1240k.bam.bai 1240k +I15517 half ds SAMEA114441000 PRJEB66422 ERR12121144 I15517 ERS16428784 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15517 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/044/ERR12121144/ERR12121144.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/044/ERR12121144/ERR12121144.fastq.gz 41442038 2fb3ed9306dab681f1aea0719d1041ec 1468019 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121144/I15517.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121144/I15517.1240k.bam.bai 1240k +I15518 half ds SAMEA114441009 PRJEB66422 ERR12121146 I15518 ERS16428793 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15518 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/046/ERR12121146/ERR12121146.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/046/ERR12121146/ERR12121146.fastq.gz 66821402 0481fa4fbf078dd2347eb571fb0dc22f 1884471 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121146/I15518.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121146/I15518.1240k.bam.bai 1240k +I15519 half ds SAMEA114440977 PRJEB66422 ERR12121148 I15519 ERS16428761 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15519 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/048/ERR12121148/ERR12121148.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/048/ERR12121148/ERR12121148.fastq.gz 7354728 a981dab7535570ffb6b5171f86b1c19e 331575 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121148/I15519.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121148/I15519.1240k.bam.bai 1240k +I15520 half ds SAMEA114441010 PRJEB66422 ERR12121150 I15520 ERS16428794 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15520 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/050/ERR12121150/ERR12121150.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/050/ERR12121150/ERR12121150.fastq.gz 149690254 d80ae2c3eac90590722656bd53972758 3901934 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121150/I15520.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121150/I15520.1240k.bam.bai 1240k +I15521 half ds SAMEA114441011 PRJEB66422 ERR12121152 I15521 ERS16428795 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15521 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/052/ERR12121152/ERR12121152.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/052/ERR12121152/ERR12121152.fastq.gz 73394212 5fd57013f21aeafd96459982112c5876 2020832 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121152/I15521.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121152/I15521.1240k.bam.bai 1240k +I15522 half ds SAMEA114441012 PRJEB66422 ERR12121154 I15522 ERS16428796 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15522 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/054/ERR12121154/ERR12121154.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/054/ERR12121154/ERR12121154.fastq.gz 76526859 ac57ca49fb0f39d2eff9588bfdfbea79 2137058 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121154/I15522.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121154/I15522.1240k.bam.bai 1240k +I15523 half ds SAMEA114441103 PRJEB66422 ERR12121156 I15523 ERS16428887 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15523 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/056/ERR12121156/ERR12121156.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/056/ERR12121156/ERR12121156.fastq.gz 11595349 cfc67d81d8bb61af518aef616461f1d6 434046 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121156/I15523.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121156/I15523.1240k.bam.bai 1240k +I15524 half ds SAMEA114441013 PRJEB66422 ERR12121158 I15524 ERS16428797 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15524 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/058/ERR12121158/ERR12121158.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/058/ERR12121158/ERR12121158.fastq.gz 51335241 54d9b2215442a82bf295743ba87713a1 1434938 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121158/I15524.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121158/I15524.1240k.bam.bai 1240k +I15525 half ds SAMEA114441014 PRJEB66422 ERR12121160 I15525 ERS16428798 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15525 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/060/ERR12121160/ERR12121160.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/060/ERR12121160/ERR12121160.fastq.gz 83182092 a28abfd37e4a32d5fbe354b2149b02c4 2155461 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121160/I15525.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121160/I15525.1240k.bam.bai 1240k +I15526 half ds SAMEA114441015 PRJEB66422 ERR12121162 I15526 ERS16428799 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15526 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/062/ERR12121162/ERR12121162.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/062/ERR12121162/ERR12121162.fastq.gz 52922457 49b2d69f27a19a72d513c7af27241c1b 1319344 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121162/I15526.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121162/I15526.1240k.bam.bai 1240k +I15527 half ds SAMEA114440979 PRJEB66422 ERR12121164 I15527 ERS16428763 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15527 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/064/ERR12121164/ERR12121164.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/064/ERR12121164/ERR12121164.fastq.gz 184998381 35ebdb45c50baf2851ab236be97bed29 5128531 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121164/I15527.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121164/I15527.1240k.bam.bai 1240k +I15528 half ds SAMEA114440980 PRJEB66422 ERR12121166 I15528 ERS16428764 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15528 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/066/ERR12121166/ERR12121166.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/066/ERR12121166/ERR12121166.fastq.gz 75920477 011f9006f545b770566535c4fa0b1357 2058556 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121166/I15528.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121166/I15528.1240k.bam.bai 1240k +I15529 half ds SAMEA114440981 PRJEB66422 ERR12121168 I15529 ERS16428765 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15529 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/068/ERR12121168/ERR12121168.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/068/ERR12121168/ERR12121168.fastq.gz 98505828 7e6323c037a215f0eebbe041cf908937 2995282 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121168/I15529.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121168/I15529.1240k.bam.bai 1240k +I15530 half ds SAMEA114440968 PRJEB66422 ERR12121170 I15530 ERS16428752 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15530 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/070/ERR12121170/ERR12121170.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/070/ERR12121170/ERR12121170.fastq.gz 8394992 f45f43742e9380bd83ed850872dd221a 348300 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121170/I15530.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121170/I15530.1240k.bam.bai 1240k +I15531 half ds SAMEA114440982 PRJEB66422 ERR12121172 I15531 ERS16428766 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15531 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/072/ERR12121172/ERR12121172.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/072/ERR12121172/ERR12121172.fastq.gz 77561209 4265bf3f4b2c14162b4f4097e19f1e74 2531481 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121172/I15531.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121172/I15531.1240k.bam.bai 1240k +I15532 half ds SAMEA114440983 PRJEB66422 ERR12121174 I15532 ERS16428767 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15532 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/074/ERR12121174/ERR12121174.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/074/ERR12121174/ERR12121174.fastq.gz 53575918 20209901c0712037350d73eeb02cc312 1967194 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121174/I15532.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121174/I15532.1240k.bam.bai 1240k +I15533 half ds SAMEA114440984 PRJEB66422 ERR12121176 I15533 ERS16428768 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15533 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/076/ERR12121176/ERR12121176.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/076/ERR12121176/ERR12121176.fastq.gz 48987908 e41c2da976d39d2033b1b9531276c0bf 1400567 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121176/I15533.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121176/I15533.1240k.bam.bai 1240k +I15534 half ds SAMEA114440985 PRJEB66422 ERR12121178 I15534 ERS16428769 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15534 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/078/ERR12121178/ERR12121178.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/078/ERR12121178/ERR12121178.fastq.gz 21807100 011555a67d35187f67e17d6299d18876 691304 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121178/I15534.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121178/I15534.1240k.bam.bai 1240k +I15535 half ds SAMEA114440986 PRJEB66422 ERR12121180 I15535 ERS16428770 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15535 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/080/ERR12121180/ERR12121180.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/080/ERR12121180/ERR12121180.fastq.gz 35923023 abe6759a10a8f14cef46311cccddeb90 1118308 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121180/I15535.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121180/I15535.1240k.bam.bai 1240k +I15536 half ds SAMEA114440969 PRJEB66422 ERR12121182 I15536 ERS16428753 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15536 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/082/ERR12121182/ERR12121182.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/082/ERR12121182/ERR12121182.fastq.gz 7012932 ae08f29e2c23a4f424b02021e299739f 291539 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121182/I15536.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121182/I15536.1240k.bam.bai 1240k +I15537 half ds SAMEA114441031 PRJEB66422 ERR12121184 I15537 ERS16428815 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15537 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/084/ERR12121184/ERR12121184.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/084/ERR12121184/ERR12121184.fastq.gz 113089012 d70f05f3510bbbef050102c27300561c 3639751 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121184/I15537.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121184/I15537.1240k.bam.bai 1240k +I15538 half ds SAMEA114441032 PRJEB66422 ERR12121186 I15538 ERS16428816 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15538_1240k OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/086/ERR12121186/ERR12121186.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/086/ERR12121186/ERR12121186.fastq.gz 16630624 9cb7a4e6fea14be674bd27b0a48aacb5 544337 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121186/I15538_1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121186/I15538_1240k.bam.bai 1240k +I15539 half ds SAMEA114498459 PRJEB66422 ERR12121189 I15539 ERS16480113 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15539_1240k OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/089/ERR12121189/ERR12121189.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/089/ERR12121189/ERR12121189.fastq.gz 120237080 6b714d3ee8ca4211153f5e88458921fb 3883344 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121189/I15539_1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121189/I15539_1240k.bam.bai 1240k +I15540 half ds SAMEA114441033 PRJEB66422 ERR12121192 I15540 ERS16428817 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15540 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/092/ERR12121192/ERR12121192.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/092/ERR12121192/ERR12121192.fastq.gz 168810388 705bb75891a1fb95323048655539d66b 4788589 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121192/I15540.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121192/I15540.1240k.bam.bai 1240k +I15541 half ds SAMEA114441034 PRJEB66422 ERR12121194 I15541 ERS16428818 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15541 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/094/ERR12121194/ERR12121194.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/094/ERR12121194/ERR12121194.fastq.gz 104374112 4a59d6c34398d750f74dbe9a4d1b1899 3045126 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121194/I15541.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121194/I15541.1240k.bam.bai 1240k +I15542 half ds SAMEA114441035 PRJEB66422 ERR12121196 I15542 ERS16428819 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15542 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/096/ERR12121196/ERR12121196.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/096/ERR12121196/ERR12121196.fastq.gz 135002922 df0ffc79f1390736b411a43e7daacc66 3597760 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121196/I15542.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121196/I15542.1240k.bam.bai 1240k +I15543 half ds SAMEA114441036 PRJEB66422 ERR12121198 I15543 ERS16428820 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15543 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/098/ERR12121198/ERR12121198.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/098/ERR12121198/ERR12121198.fastq.gz 202391775 a6935768dba6b139655a2bb6b1006251 6683794 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121198/I15543.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121198/I15543.1240k.bam.bai 1240k +I15544 half ds SAMEA114441021 PRJEB66422 ERR12121200 I15544 ERS16428805 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15544 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/000/ERR12121200/ERR12121200.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/000/ERR12121200/ERR12121200.fastq.gz 123113214 b7acb69846f23a6779d7ec70d66f39cf 3440970 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121200/I15544.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121200/I15544.1240k.bam.bai 1240k +I15545 half ds SAMEA114441022 PRJEB66422 ERR12121202 I15545 ERS16428806 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15545 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/002/ERR12121202/ERR12121202.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/002/ERR12121202/ERR12121202.fastq.gz 179643294 1f3d5f492b2883535fe38bec09e493ec 5148383 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121202/I15545.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121202/I15545.1240k.bam.bai 1240k +I15546 half ds SAMEA114441023 PRJEB66422 ERR12121204 I15546 ERS16428807 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15546 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/004/ERR12121204/ERR12121204.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/004/ERR12121204/ERR12121204.fastq.gz 87723856 4962eca3c4c357d6ec5d3d3d433a0738 2770074 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121204/I15546.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121204/I15546.1240k.bam.bai 1240k +I15547 half ds SAMEA114441024 PRJEB66422 ERR12121206 I15547 ERS16428808 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15547 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/006/ERR12121206/ERR12121206.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/006/ERR12121206/ERR12121206.fastq.gz 25231800 ef01b52a9f1e2f2e23db2d3a25dbcbc7 1010760 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121206/I15547.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121206/I15547.1240k.bam.bai 1240k +I15548 half ds SAMEA114441025 PRJEB66422 ERR12121208 I15548 ERS16428809 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15548 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/008/ERR12121208/ERR12121208.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/008/ERR12121208/ERR12121208.fastq.gz 113852679 5b30930b01de746ed8d7ce0baa208189 3066977 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121208/I15548.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121208/I15548.1240k.bam.bai 1240k +I15549 half ds SAMEA114441037 PRJEB66422 ERR12121210 I15549 ERS16428821 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15549 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/010/ERR12121210/ERR12121210.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/010/ERR12121210/ERR12121210.fastq.gz 114800980 0afe1d1c8f41281025ab85aee03149a3 3943515 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121210/I15549.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121210/I15549.1240k.bam.bai 1240k +I15550 half ds SAMEA114440978 PRJEB66422 ERR12121212 I15550 ERS16428762 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15550 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/012/ERR12121212/ERR12121212.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/012/ERR12121212/ERR12121212.fastq.gz 11364571 b3df1a1f41c8c1ca43cbc99fde9c2ae8 438774 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121212/I15550.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121212/I15550.1240k.bam.bai 1240k +I15551 half ds SAMEA114441026 PRJEB66422 ERR12121214 I15551 ERS16428810 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15551 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/014/ERR12121214/ERR12121214.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/014/ERR12121214/ERR12121214.fastq.gz 85637321 1fc654c64a2e935876c12b0b21cc3a7f 2764167 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121214/I15551.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121214/I15551.1240k.bam.bai 1240k +I15552 half ds SAMEA114441027 PRJEB66422 ERR12121216 I15552 ERS16428811 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15552 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/016/ERR12121216/ERR12121216.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/016/ERR12121216/ERR12121216.fastq.gz 75326036 aa4757d0641d15db3351dfb2ef40c2b1 2372198 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121216/I15552.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121216/I15552.1240k.bam.bai 1240k +I15553 half ds SAMEA114441028 PRJEB66422 ERR12121218 I15553 ERS16428812 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15553 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/018/ERR12121218/ERR12121218.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/018/ERR12121218/ERR12121218.fastq.gz 97961366 c39daf8fd7744944b632f6309ef74989 2710210 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121218/I15553.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121218/I15553.1240k.bam.bai 1240k +I15554 half ds SAMEA114441029 PRJEB66422 ERR12121220 I15554 ERS16428813 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15554 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/020/ERR12121220/ERR12121220.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/020/ERR12121220/ERR12121220.fastq.gz 43808971 bfff66109c4f3cb68494176d2e5092d9 1354241 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121220/I15554.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121220/I15554.1240k.bam.bai 1240k +I15555 half ds SAMEA114441030 PRJEB66422 ERR12121222 I15555 ERS16428814 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I15555 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/022/ERR12121222/ERR12121222.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/022/ERR12121222/ERR12121222.fastq.gz 80027955 05a0d5a028f3cbeb995e3ff49bfd8087 2244925 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121222/I15555.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121222/I15555.1240k.bam.bai 1240k +I24343 half ds SAMEA114493313 PRJEB66422 ERR12121225 I24343 ERS16474971 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I24343 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/025/ERR12121225/ERR12121225.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/025/ERR12121225/ERR12121225.fastq.gz 49450549 9e5c6b77aef9a0518c62e2ebb465eec8 2053698 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121225/I24343.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121225/I24343.1240k.bam.bai 1240k +I26702 half ds SAMEA114441038 PRJEB66422 ERR12121227 I26702 ERS16428822 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26702 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/027/ERR12121227/ERR12121227.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/027/ERR12121227/ERR12121227.fastq.gz 471091613 b1da86ac27b9ed3b05a820f55c41cb6c 17545212 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121227/I26702.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121227/I26702.1240k.bam.bai 1240k +I26703 half ds SAMEA114441040 PRJEB66422 ERR12121229 I26703 ERS16428824 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26703 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/029/ERR12121229/ERR12121229.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/029/ERR12121229/ERR12121229.fastq.gz 555878549 a63282b254d1fbe70d237e1c0d9791e7 20977195 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121229/I26703.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121229/I26703.1240k.bam.bai 1240k +I26704 half ds SAMEA114441041 PRJEB66422 ERR12121231 I26704 ERS16428825 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26704 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/031/ERR12121231/ERR12121231.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/031/ERR12121231/ERR12121231.fastq.gz 526361362 7f69030be26739b39ceb8128cfb576ea 20070259 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121231/I26704.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121231/I26704.1240k.bam.bai 1240k +I26705 half ds SAMEA114441042 PRJEB66422 ERR12121233 I26705 ERS16428826 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26705 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/033/ERR12121233/ERR12121233.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/033/ERR12121233/ERR12121233.fastq.gz 262669706 a355b47a712975ba7aebd4bdaf364965 10217173 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121233/I26705.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121233/I26705.1240k.bam.bai 1240k +I26707 half ds SAMEA114441043 PRJEB66422 ERR12121235 I26707 ERS16428827 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26707 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/035/ERR12121235/ERR12121235.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/035/ERR12121235/ERR12121235.fastq.gz 454754916 547693fe47f332b456c4e88db6f167a0 17254017 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121235/I26707.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121235/I26707.1240k.bam.bai 1240k +I26708 half ds SAMEA114441039 PRJEB66422 ERR12121237 I26708 ERS16428823 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26708 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/037/ERR12121237/ERR12121237.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/037/ERR12121237/ERR12121237.fastq.gz 568618052 b8ef85e7eb2891254dcb196659132857 21340993 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121237/I26708.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121237/I26708.1240k.bam.bai 1240k +I26709 half ds SAMEA114441044 PRJEB66422 ERR12121239 I26709 ERS16428828 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26709 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/039/ERR12121239/ERR12121239.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/039/ERR12121239/ERR12121239.fastq.gz 557323024 b6cceeac0f1668f5ba4450643f2b35c3 20932200 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121239/I26709.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121239/I26709.1240k.bam.bai 1240k +I26714 half ds SAMEA114441045 PRJEB66422 ERR12121241 I26714 ERS16428829 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26714 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/041/ERR12121241/ERR12121241.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/041/ERR12121241/ERR12121241.fastq.gz 767885949 532dee3354662391920d9d097cabc566 30127993 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121241/I26714.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121241/I26714.1240k.bam.bai 1240k +I26718 half ds SAMEA114441046 PRJEB66422 ERR12121243 I26718 ERS16428830 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26718 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/043/ERR12121243/ERR12121243.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/043/ERR12121243/ERR12121243.fastq.gz 133657528 cb45da842ae17d76468fd4d2d3f2f6c4 4773871 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121243/I26718.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121243/I26718.1240k.bam.bai 1240k +I26719 half ds SAMEA114441047 PRJEB66422 ERR12121245 I26719 ERS16428831 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26719 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/045/ERR12121245/ERR12121245.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/045/ERR12121245/ERR12121245.fastq.gz 201344683 39737d1ce69fab42cb28f3aacadeaca1 7113158 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121245/I26719.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121245/I26719.1240k.bam.bai 1240k +I26745 half ds SAMEA114441048 PRJEB66422 ERR12121247 I26745 ERS16428832 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26745 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/047/ERR12121247/ERR12121247.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/047/ERR12121247/ERR12121247.fastq.gz 760488915 ee3d9c950c9b9410189c5fe53b0358d3 28520484 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121247/I26745.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121247/I26745.1240k.bam.bai 1240k +I26746 half ds SAMEA114441049 PRJEB66422 ERR12121249 I26746 ERS16428833 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26746 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/049/ERR12121249/ERR12121249.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/049/ERR12121249/ERR12121249.fastq.gz 708226900 ded32967a036fe96f4ca916aac0cf62e 26718182 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121249/I26746.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121249/I26746.1240k.bam.bai 1240k +I26747 half ds SAMEA114441050 PRJEB66422 ERR12121251 I26747 ERS16428834 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26747 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/051/ERR12121251/ERR12121251.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/051/ERR12121251/ERR12121251.fastq.gz 780484292 d66a62cfd6a7fdae7b513ef5b82cb833 29855591 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121251/I26747.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121251/I26747.1240k.bam.bai 1240k +I26748 half ds SAMEA114441051 PRJEB66422 ERR12121253 I26748 ERS16428835 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26748 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/053/ERR12121253/ERR12121253.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/053/ERR12121253/ERR12121253.fastq.gz 487355041 3b7e2ddff5a53aebeec7b15943978026 18835501 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121253/I26748.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121253/I26748.1240k.bam.bai 1240k +I26749 half ds SAMEA114441052 PRJEB66422 ERR12121255 I26749 ERS16428836 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26749 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/055/ERR12121255/ERR12121255.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/055/ERR12121255/ERR12121255.fastq.gz 324130807 282f7b228534eee65a4aae4feef6eed5 12641344 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121255/I26749.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121255/I26749.1240k.bam.bai 1240k +I26750 half ds SAMEA114441053 PRJEB66422 ERR12121257 I26750 ERS16428837 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26750 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/057/ERR12121257/ERR12121257.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/057/ERR12121257/ERR12121257.fastq.gz 762104866 2a0e699fb347c8e02b3f0c6f13b7e2a7 28912318 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121257/I26750.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121257/I26750.1240k.bam.bai 1240k +I26751 half ds SAMEA114441054 PRJEB66422 ERR12121259 I26751 ERS16428838 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26751 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/059/ERR12121259/ERR12121259.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/059/ERR12121259/ERR12121259.fastq.gz 309680718 c6f26d63f68189bb5bc849d5cb91ac8a 10043350 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121259/I26751.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121259/I26751.1240k.bam.bai 1240k +I26752 half ds SAMEA114441055 PRJEB66422 ERR12121261 I26752 ERS16428839 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26752 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/061/ERR12121261/ERR12121261.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/061/ERR12121261/ERR12121261.fastq.gz 695553810 0174b1a3699c88d1875a668a86855f21 26077749 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121261/I26752.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121261/I26752.1240k.bam.bai 1240k +I26753 half ds SAMEA114441056 PRJEB66422 ERR12121263 I26753 ERS16428840 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26753 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/063/ERR12121263/ERR12121263.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/063/ERR12121263/ERR12121263.fastq.gz 798756331 f3425f729fa9ac2bddeee6d70bd1bd84 30767759 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121263/I26753.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121263/I26753.1240k.bam.bai 1240k +I26754 half ds SAMEA114441057 PRJEB66422 ERR12121265 I26754 ERS16428841 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26754 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/065/ERR12121265/ERR12121265.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/065/ERR12121265/ERR12121265.fastq.gz 210289562 8e50efcc4903059e79ba2ecaec87ca83 7094713 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121265/I26754.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121265/I26754.1240k.bam.bai 1240k +I26761 half ds SAMEA114441058 PRJEB66422 ERR12121267 I26761 ERS16428842 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26761 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/067/ERR12121267/ERR12121267.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/067/ERR12121267/ERR12121267.fastq.gz 35067822 21d13c31d0c6dac7a9cc7794af9a43dd 1386969 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121267/I26761.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121267/I26761.1240k.bam.bai 1240k +I26762 half ds SAMEA114441059 PRJEB66422 ERR12121269 I26762 ERS16428843 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26762 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/069/ERR12121269/ERR12121269.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/069/ERR12121269/ERR12121269.fastq.gz 362720904 d94dc958034c693a423e3fc23d511120 13395647 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121269/I26762.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121269/I26762.1240k.bam.bai 1240k +I26763 half ds SAMEA114441060 PRJEB66422 ERR12121271 I26763 ERS16428844 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26763 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/071/ERR12121271/ERR12121271.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/071/ERR12121271/ERR12121271.fastq.gz 738745526 9e8fe8ededfdedd1824503c78f8adf48 28606725 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121271/I26763.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121271/I26763.1240k.bam.bai 1240k +I26764 half ds SAMEA114441061 PRJEB66422 ERR12121273 I26764 ERS16428845 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26764 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/073/ERR12121273/ERR12121273.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/073/ERR12121273/ERR12121273.fastq.gz 763564086 8ec3346976df4b90adedcec2d8a86ebf 29307399 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121273/I26764.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121273/I26764.1240k.bam.bai 1240k +I26765 half ds SAMEA114441065 PRJEB66422 ERR12121275 I26765 ERS16428849 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26765 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/075/ERR12121275/ERR12121275.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/075/ERR12121275/ERR12121275.fastq.gz 689001996 9775f459111b5ea5b4561e0e31ece54a 25974064 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121275/I26765.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121275/I26765.1240k.bam.bai 1240k +I26766 half ds SAMEA114441066 PRJEB66422 ERR12121277 I26766 ERS16428850 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26766 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/077/ERR12121277/ERR12121277.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/077/ERR12121277/ERR12121277.fastq.gz 628830782 eb0b66441f95118f22a6d96279244160 23572671 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121277/I26766.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121277/I26766.1240k.bam.bai 1240k +I26767 half ds SAMEA114441067 PRJEB66422 ERR12121279 I26767 ERS16428851 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26767 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/079/ERR12121279/ERR12121279.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/079/ERR12121279/ERR12121279.fastq.gz 341740072 872069008f5dc1bcd33eaf33f5a55583 12770762 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121279/I26767.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121279/I26767.1240k.bam.bai 1240k +I26775 half ds SAMEA114441068 PRJEB66422 ERR12121281 I26775 ERS16428852 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26775 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/081/ERR12121281/ERR12121281.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/081/ERR12121281/ERR12121281.fastq.gz 490195604 f5d1436e8cc9b26e07a44ab7d553df31 15754812 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121281/I26775.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121281/I26775.1240k.bam.bai 1240k +I26776 half ds SAMEA114441069 PRJEB66422 ERR12121283 I26776 ERS16428853 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26776 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/083/ERR12121283/ERR12121283.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/083/ERR12121283/ERR12121283.fastq.gz 326592154 c0fb643df3993f2ac455c85518d36552 11914574 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121283/I26776.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121283/I26776.1240k.bam.bai 1240k +I26894 half ds SAMEA114441070 PRJEB66422 ERR12121285 I26894 ERS16428854 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26894 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/085/ERR12121285/ERR12121285.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/085/ERR12121285/ERR12121285.fastq.gz 601611339 dd82aa58e63502fde90780957e92c0de 21728593 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121285/I26894.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121285/I26894.1240k.bam.bai 1240k +I26895 half ds SAMEA114441071 PRJEB66422 ERR12121287 I26895 ERS16428855 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26895 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/087/ERR12121287/ERR12121287.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/087/ERR12121287/ERR12121287.fastq.gz 490247939 ac3bbad7afab1b9a7c9c5215b67fa4a5 18148115 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121287/I26895.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121287/I26895.1240k.bam.bai 1240k +I26897 half ds SAMEA114441072 PRJEB66422 ERR12121289 I26897 ERS16428856 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I26897 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/089/ERR12121289/ERR12121289.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/089/ERR12121289/ERR12121289.fastq.gz 778942908 d0d78c2ec9599efef0abd1898b4fe683 30169332 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121289/I26897.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121289/I26897.1240k.bam.bai 1240k +I27295 half ds SAMEA114441073 PRJEB66422 ERR12121291 I27295 ERS16428857 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I27295 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/091/ERR12121291/ERR12121291.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/091/ERR12121291/ERR12121291.fastq.gz 547155701 192d0706f8c139a8f209498cfbb3deb1 19283621 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121291/I27295.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121291/I27295.1240k.bam.bai 1240k +I27296 half ds SAMEA114441074 PRJEB66422 ERR12121293 I27296 ERS16428858 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I27296 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/093/ERR12121293/ERR12121293.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/093/ERR12121293/ERR12121293.fastq.gz 523149141 452ed5ff0cd0ed928e0f6ee369a501a9 18465838 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121293/I27296.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121293/I27296.1240k.bam.bai 1240k +I27297 half ds SAMEA114441075 PRJEB66422 ERR12121295 I27297 ERS16428859 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I27297 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/095/ERR12121295/ERR12121295.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/095/ERR12121295/ERR12121295.fastq.gz 571026490 69ba1f7ff7d7f31e1c936f478e264d73 20615772 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121295/I27297.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121295/I27297.1240k.bam.bai 1240k +I27298 half ds SAMEA114441076 PRJEB66422 ERR12121297 I27298 ERS16428860 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I27298 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/097/ERR12121297/ERR12121297.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/097/ERR12121297/ERR12121297.fastq.gz 600693203 9d036e4b2cfd27c783db193d4fcb792a 21970602 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121297/I27298.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121297/I27298.1240k.bam.bai 1240k +I28388 half ds SAMEA114441077 PRJEB66422 ERR12121299 I28388 ERS16428861 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I28388 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/099/ERR12121299/ERR12121299.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/099/ERR12121299/ERR12121299.fastq.gz 683277194 787cc651e88abd6060acfdc5f9e6122c 24693998 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121299/I28388.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121299/I28388.1240k.bam.bai 1240k +I28390 half ds SAMEA114441078 PRJEB66422 ERR12121301 I28390 ERS16428862 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I28390 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/001/ERR12121301/ERR12121301.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/001/ERR12121301/ERR12121301.fastq.gz 686570268 5befecf0235d4b94b7b8917f40026af7 25356521 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121301/I28390.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121301/I28390.1240k.bam.bai 1240k +I28392 half ds SAMEA114441079 PRJEB66422 ERR12121303 I28392 ERS16428863 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I28392 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/003/ERR12121303/ERR12121303.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/003/ERR12121303/ERR12121303.fastq.gz 715295432 ed2c21fb2209ab831562bce8fb2bd548 25685154 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121303/I28392.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121303/I28392.1240k.bam.bai 1240k +I28393 half ds SAMEA114441080 PRJEB66422 ERR12121305 I28393 ERS16428864 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I28393 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/005/ERR12121305/ERR12121305.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/005/ERR12121305/ERR12121305.fastq.gz 645419372 6e5d0d82f20e760249253c298ade5036 23352337 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121305/I28393.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121305/I28393.1240k.bam.bai 1240k +I28394 half ds SAMEA114441081 PRJEB66422 ERR12121307 I28394 ERS16428865 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I28394 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/007/ERR12121307/ERR12121307.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/007/ERR12121307/ERR12121307.fastq.gz 703310233 a0827c258653832c2f9836ca51eb5472 25066977 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121307/I28394.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121307/I28394.1240k.bam.bai 1240k +I28397 half ds SAMEA114441082 PRJEB66422 ERR12121309 I28397 ERS16428866 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I28397 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/009/ERR12121309/ERR12121309.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/009/ERR12121309/ERR12121309.fastq.gz 689857585 841d2c8e5eb0233512ccbeffc3d2a351 25536913 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121309/I28397.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121309/I28397.1240k.bam.bai 1240k +I28398 half ds SAMEA114441083 PRJEB66422 ERR12121311 I28398 ERS16428867 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I28398 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/011/ERR12121311/ERR12121311.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/011/ERR12121311/ERR12121311.fastq.gz 574698444 8e874eb398426985ebf3cbe2575d7cbd 20459395 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121311/I28398.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121311/I28398.1240k.bam.bai 1240k +I28400 half ds SAMEA114441084 PRJEB66422 ERR12121313 I28400 ERS16428868 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I28400 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/013/ERR12121313/ERR12121313.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/013/ERR12121313/ERR12121313.fastq.gz 605577282 fc7f8e58a4af2d6182165667ebbfb59f 21606182 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121313/I28400.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121313/I28400.1240k.bam.bai 1240k +I28446 half ds SAMEA114441062 PRJEB66422 ERR12121315 I28446 ERS16428846 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I28446 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/015/ERR12121315/ERR12121315.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/015/ERR12121315/ERR12121315.fastq.gz 308935148 3ebcb76476efbe1f926da8f011227576 10784060 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121315/I28446.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121315/I28446.1240k.bam.bai 1240k +I28447 half ds SAMEA114441063 PRJEB66422 ERR12121317 I28447 ERS16428847 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I28447 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/017/ERR12121317/ERR12121317.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/017/ERR12121317/ERR12121317.fastq.gz 655471903 87937fcbbc5e4a889f9c771d6cc2c6c7 24693391 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121317/I28447.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121317/I28447.1240k.bam.bai 1240k +I28448 half ds SAMEA114441064 PRJEB66422 ERR12121319 I28448 ERS16428848 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I28448 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/019/ERR12121319/ERR12121319.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/019/ERR12121319/ERR12121319.fastq.gz 593855692 1ad9610ae32a3be4c47d2edd7a95a5a5 21393341 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121319/I28448.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121319/I28448.1240k.bam.bai 1240k +I32298 half ds SAMEA114441020 PRJEB66422 ERR12121322 I32298 ERS16428804 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I32298 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/022/ERR12121322/ERR12121322.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/022/ERR12121322/ERR12121322.fastq.gz 27885729 e6758826a66f2cf5cf744897f3974f64 1062198 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121322/I32298.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121322/I32298.1240k.bam.bai Twist1.4M +I32299 half ds SAMEA114441019 PRJEB66422 ERR12121324 I32299 ERS16428803 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I32299 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/024/ERR12121324/ERR12121324.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/024/ERR12121324/ERR12121324.fastq.gz 112927640 c1a68f80e56831f07ece663043fc8939 3011263 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121324/I32299.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121324/I32299.1240k.bam.bai Twist1.4M +I32300 half ds SAMEA114441018 PRJEB66422 ERR12121326 I32300 ERS16428802 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I32300 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/026/ERR12121326/ERR12121326.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/026/ERR12121326/ERR12121326.fastq.gz 129056435 d6f3d2235cbf4d66896f27a82e35f882 3495522 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121326/I32300.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121326/I32300.1240k.bam.bai Twist1.4M +I32301 half ds SAMEA114441017 PRJEB66422 ERR12121328 I32301 ERS16428801 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I32301 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/028/ERR12121328/ERR12121328.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/028/ERR12121328/ERR12121328.fastq.gz 21357694 77b339ad939d773ab6463a2a6be59231 655496 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121328/I32301.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121328/I32301.1240k.bam.bai Twist1.4M +I32304 half ds SAMEA114441099 PRJEB66422 ERR12121331 I32304 ERS16428883 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I32304 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/031/ERR12121331/ERR12121331.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/031/ERR12121331/ERR12121331.fastq.gz 9103017 566443c18622905ee5082f9b549bda51 326248 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121331/I32304.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121331/I32304.1240k.bam.bai Twist1.4M +I32305 half ds SAMEA114441016 PRJEB66422 ERR12121333 I32305 ERS16428800 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I32305 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/033/ERR12121333/ERR12121333.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/033/ERR12121333/ERR12121333.fastq.gz 322104747 83442b10778a45a5dfece82e616b11db 8895583 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121333/I32305.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121333/I32305.1240k.bam.bai Twist1.4M +I34800 half ds SAMEA114441085 PRJEB66422 ERR12121335 I34800 ERS16428869 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I34800 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/035/ERR12121335/ERR12121335.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/035/ERR12121335/ERR12121335.fastq.gz 535366972 82ddde6d934b775f437408bc431fb6fc 17127996 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121335/I34800.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121335/I34800.1240k.bam.bai Twist1.4M +I34980 half ds SAMEA114441090 PRJEB66422 ERR12121337 I34980 ERS16428874 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I34980 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/037/ERR12121337/ERR12121337.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/037/ERR12121337/ERR12121337.fastq.gz 763057891 cefa36db7471fb5a094eb75a25712dfd 27235737 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121337/I34980.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121337/I34980.1240k.bam.bai Twist1.4M +I35008 half ds SAMEA114441094 PRJEB66422 ERR12121339 I35008 ERS16428878 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I35008 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/039/ERR12121339/ERR12121339.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/039/ERR12121339/ERR12121339.fastq.gz 808635595 3d42e71081d09d16bde825a3d54446fb 28966314 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121339/I35008.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121339/I35008.1240k.bam.bai Twist1.4M +I35010 half ds SAMEA114441093 PRJEB66422 ERR12121341 I35010 ERS16428877 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I35010 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/041/ERR12121341/ERR12121341.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/041/ERR12121341/ERR12121341.fastq.gz 750431398 6b216608d0207a8257fe560908256bb3 26204311 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121341/I35010.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121341/I35010.1240k.bam.bai Twist1.4M +I35012 half ds SAMEA114441089 PRJEB66422 ERR12121343 I35012 ERS16428873 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I35012 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/043/ERR12121343/ERR12121343.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/043/ERR12121343/ERR12121343.fastq.gz 583414524 6838759549e8dc7c6e0eab3336e2b44f 20428429 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121343/I35012.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121343/I35012.1240k.bam.bai Twist1.4M +I35014 half ds SAMEA114441091 PRJEB66422 ERR12121345 I35014 ERS16428875 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I35014 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/045/ERR12121345/ERR12121345.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/045/ERR12121345/ERR12121345.fastq.gz 84808278 3a1419ca92868df382719a43d8d2fbfb 2249019 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121345/I35014.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121345/I35014.1240k.bam.bai Twist1.4M +I35081 half ds SAMEA114441088 PRJEB66422 ERR12121347 I35081 ERS16428872 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I35081 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/047/ERR12121347/ERR12121347.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/047/ERR12121347/ERR12121347.fastq.gz 906471874 a20df878de2e6138a35885e21b970589 32434999 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121347/I35081.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121347/I35081.1240k.bam.bai Twist1.4M +I35095 half ds SAMEA114441092 PRJEB66422 ERR12121349 I35095 ERS16428876 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I35095 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/049/ERR12121349/ERR12121349.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/049/ERR12121349/ERR12121349.fastq.gz 721088772 2ed49834d32fdeff3ebf6e690e58507b 23668108 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121349/I35095.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121349/I35095.1240k.bam.bai Twist1.4M +I4664 half ds SAMEA114441104 PRJEB66422 ERR12121352 I4664 ERS16428888 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I4664 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/052/ERR12121352/ERR12121352.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/052/ERR12121352/ERR12121352.fastq.gz 3580897 60ec188beb6de7f564331210f740d423 114821 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121352/I4664.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121352/I4664.1240k.bam.bai 1240k +I4803 half ds SAMEA114441095 PRJEB66422 ERR12121354 I4803 ERS16428879 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I4803 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/054/ERR12121354/ERR12121354.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/054/ERR12121354/ERR12121354.fastq.gz 437570957 a9e8dc355123983be74ef4449a9497c1 13503516 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121354/I4803.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121354/I4803.1240k.bam.bai 1240k +I5404 plus ss SAMEA114441086 PRJEB66422 ERR12121357 I5404 ERS16428870 2023-12-06 2023-12-06 HiSeq X Ten PAIRED GENOMIC ILLUMINA I5404 OTHER ftp.sra.ebi.ac.uk/vol1/fastq/ERR121/057/ERR12121357/ERR12121357.fastq.gz fasp.sra.ebi.ac.uk:/vol1/fastq/ERR121/057/ERR12121357/ERR12121357.fastq.gz 93562642 9c48a3be699b844cd4b77834f31d3716 2761457 ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121357/I5404.1240k.bam;ftp.sra.ebi.ac.uk/vol1/run/ERR121/ERR12121357/I5404.1240k.bam.bai 1240k From e584b00f4b0ff29e0a356b71d87944407e6976f5 Mon Sep 17 00:00:00 2001 From: danimfernandes Date: Tue, 27 Feb 2024 11:49:11 +0000 Subject: [PATCH 07/17] Delete packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.config --- .../2024_OlaldeCarrion_Roman.config | 41 ------------------- 1 file changed, 41 deletions(-) delete mode 100644 packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.config diff --git a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.config b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.config deleted file mode 100644 index 57c4b92..0000000 --- a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.config +++ /dev/null @@ -1,41 +0,0 @@ -// Keep track of config versions -minotaur_release='0.2.1' // The release tag of the poseidon-eager repository used for processing and config file retrieval -config_template_version='0.3.0dev' -package_config_version='0.3.0dev' -minotaur_config_base="https://raw.githubusercontent.com/poseidon-framework/poseidon-eager/${minotaur_release}/conf" - -// This configuration file is designed to be a used with the nf-core/eager pipeline. -// Instead of having to specify all other configurations for the Minotaur pipeline -// on runtime, they are all contained in this file and loaded automatically upon -// specifying this config file during runtime. Additionally, any parameters that -// need to be altered from the defaults can be specified here. -// -// The intention is to make it easy for users to understand and reproduce the output -// from processing with the Minotaur workflow processing from the contents of a -// single file. - -// Load configuration profiles. They are loaded from the minotaur_config_base URL, main branch. -includeConfig "${minotaur_config_base}/EVA_cluster.config" // Cluster-specific configurations for nf-core/eager execution at MPI-EVA -includeConfig "${minotaur_config_base}/Minotaur.config" // Default nf-core/eager parameters for Minotaur processing. - -// The following config file specifies BED files for on-target endogenous DNA calculation and mean coverage as well as pseudohaploid genotyping. -// TODO: Select the appropriate config for the CaptureType of the package. -includeConfig "${minotaur_config_base}/CaptureType_profiles/1240K.config" - -params { - // Keep track of config file versions used when processing - config_profile_description = "${config_profile_description}\n - config_template_version: ${config_template_version}\n - package_config_version: ${package_config_version}" - config_profile_contact = "Thiseas C. Lamnidis (@TCLamnidis)" - - /* - TODO: If you need to change any of the default processing parameters for this package - you can specify these parameters below. - Any parameters not specified in any of the config files default to their nf-core/eager default values. - - For information on all available parameters and their default values see: - https://nf-co.re/eager/2.4.6/parameters - - You can see the default values for parameters within poseidon-eager at: - https://github.com/poseidon-framework/poseidon-eager/blob/main/conf/Minotaur.config - */ -} From 238a13634b7981f476c9afd41f6945dfec26b6ba Mon Sep 17 00:00:00 2001 From: danimfernandes Date: Tue, 27 Feb 2024 11:49:19 +0000 Subject: [PATCH 08/17] Delete packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv --- .../2024_OlaldeCarrion_Roman.tsv | 140 ------------------ 1 file changed, 140 deletions(-) delete mode 100644 packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv diff --git a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv deleted file mode 100644 index 366f166..0000000 --- a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv +++ /dev/null @@ -1,140 +0,0 @@ -Sample_Name Library_ID Lane Colour_Chemistry SeqType Organism Strandedness UDG_Treatment R1 R2 BAM R1_target_file R2_target_file -I1116 I1116_I1116 1 4 SE Homo sapiens (modern human) double half /I1116_I1116_L1_R1.fastq.gz NA NA ERR12121073.fastq.gz NA -I12991 I12991_I12991 1 4 SE Homo sapiens (modern human) double half /I12991_I12991_L1_R1.fastq.gz NA NA ERR12121075.fastq.gz NA -I13458 I13458_I13458 1 4 SE Homo sapiens (modern human) double half /I13458_I13458_L1_R1.fastq.gz NA NA ERR12121077.fastq.gz NA -I15232 I15232_I15232 1 4 SE Homo sapiens (modern human) double half /I15232_I15232_L1_R1.fastq.gz NA NA ERR12121079.fastq.gz NA -I15485 I15485_I15485 1 4 SE Homo sapiens (modern human) double half /I15485_I15485_L1_R1.fastq.gz NA NA ERR12121081.fastq.gz NA -I15486 I15486_I15486 1 4 SE Homo sapiens (modern human) double half /I15486_I15486_L1_R1.fastq.gz NA NA ERR12121083.fastq.gz NA -I15487 I15487_I15487 1 4 SE Homo sapiens (modern human) double half /I15487_I15487_L1_R1.fastq.gz NA NA ERR12121085.fastq.gz NA -I15488 I15488_I15488 1 4 SE Homo sapiens (modern human) double half /I15488_I15488_L1_R1.fastq.gz NA NA ERR12121087.fastq.gz NA -I15489 I15489_I15489 1 4 SE Homo sapiens (modern human) double half /I15489_I15489_L1_R1.fastq.gz NA NA ERR12121089.fastq.gz NA -I15490 I15490_I15490 1 4 SE Homo sapiens (modern human) double half /I15490_I15490_L1_R1.fastq.gz NA NA ERR12121091.fastq.gz NA -I15491 I15491_I15491 1 4 SE Homo sapiens (modern human) double half /I15491_I15491_L1_R1.fastq.gz NA NA ERR12121093.fastq.gz NA -I15492 I15492_I15492 1 4 SE Homo sapiens (modern human) double half /I15492_I15492_L1_R1.fastq.gz NA NA ERR12121095.fastq.gz NA -I15493 I15493_I15493 1 4 SE Homo sapiens (modern human) double half /I15493_I15493_L1_R1.fastq.gz NA NA ERR12121097.fastq.gz NA -I15494 I15494_I15494 1 4 SE Homo sapiens (modern human) double half /I15494_I15494_L1_R1.fastq.gz NA NA ERR12121099.fastq.gz NA -I15495 I15495_I15495 1 4 SE Homo sapiens (modern human) double half /I15495_I15495_L1_R1.fastq.gz NA NA ERR12121101.fastq.gz NA -I15496 I15496_I15496 1 4 SE Homo sapiens (modern human) double half /I15496_I15496_L1_R1.fastq.gz NA NA ERR12121103.fastq.gz NA -I15497 I15497_I15497 1 4 SE Homo sapiens (modern human) double half /I15497_I15497_L1_R1.fastq.gz NA NA ERR12121105.fastq.gz NA -I15498 I15498_I15498 1 4 SE Homo sapiens (modern human) double half /I15498_I15498_L1_R1.fastq.gz NA NA ERR12121107.fastq.gz NA -I15499 I15499_I15499 1 4 SE Homo sapiens (modern human) double half /I15499_I15499_L1_R1.fastq.gz NA NA ERR12121109.fastq.gz NA -I15500 I15500_I15500 1 4 SE Homo sapiens (modern human) double half /I15500_I15500_L1_R1.fastq.gz NA NA ERR12121111.fastq.gz NA -I15501 I15501_I15501 1 4 SE Homo sapiens (modern human) double half /I15501_I15501_L1_R1.fastq.gz NA NA ERR12121113.fastq.gz NA -I15502 I15502_I15502 1 4 SE Homo sapiens (modern human) double half /I15502_I15502_L1_R1.fastq.gz NA NA ERR12121115.fastq.gz NA -I15503 I15503_I15503 1 4 SE Homo sapiens (modern human) double half /I15503_I15503_L1_R1.fastq.gz NA NA ERR12121117.fastq.gz NA -I15504 I15504_I15504 1 4 SE Homo sapiens (modern human) double half /I15504_I15504_L1_R1.fastq.gz NA NA ERR12121119.fastq.gz NA -I15505 I15505_I15505 1 4 SE Homo sapiens (modern human) double half /I15505_I15505_L1_R1.fastq.gz NA NA ERR12121121.fastq.gz NA -I15507 I15507_I15507 1 4 SE Homo sapiens (modern human) double half /I15507_I15507_L1_R1.fastq.gz NA NA ERR12121124.fastq.gz NA -I15508 I15508_I15508 1 4 SE Homo sapiens (modern human) double half /I15508_I15508_L1_R1.fastq.gz NA NA ERR12121126.fastq.gz NA -I15509 I15509_I15509 1 4 SE Homo sapiens (modern human) double half /I15509_I15509_L1_R1.fastq.gz NA NA ERR12121128.fastq.gz NA -I15510 I15510_I15510 1 4 SE Homo sapiens (modern human) double half /I15510_I15510_L1_R1.fastq.gz NA NA ERR12121130.fastq.gz NA -I15511 I15511_I15511 1 4 SE Homo sapiens (modern human) double half /I15511_I15511_L1_R1.fastq.gz NA NA ERR12121132.fastq.gz NA -I15512 I15512_I15512 1 4 SE Homo sapiens (modern human) double half /I15512_I15512_L1_R1.fastq.gz NA NA ERR12121134.fastq.gz NA -I15513 I15513_I15513 1 4 SE Homo sapiens (modern human) double half /I15513_I15513_L1_R1.fastq.gz NA NA ERR12121136.fastq.gz NA -I15514 I15514_I15514 1 4 SE Homo sapiens (modern human) double half /I15514_I15514_L1_R1.fastq.gz NA NA ERR12121138.fastq.gz NA -I15515 I15515_I15515 1 4 SE Homo sapiens (modern human) double half /I15515_I15515_L1_R1.fastq.gz NA NA ERR12121140.fastq.gz NA -I15516 I15516_I15516 1 4 SE Homo sapiens (modern human) double half /I15516_I15516_L1_R1.fastq.gz NA NA ERR12121142.fastq.gz NA -I15517 I15517_I15517 1 4 SE Homo sapiens (modern human) double half /I15517_I15517_L1_R1.fastq.gz NA NA ERR12121144.fastq.gz NA -I15518 I15518_I15518 1 4 SE Homo sapiens (modern human) double half /I15518_I15518_L1_R1.fastq.gz NA NA ERR12121146.fastq.gz NA -I15519 I15519_I15519 1 4 SE Homo sapiens (modern human) double half /I15519_I15519_L1_R1.fastq.gz NA NA ERR12121148.fastq.gz NA -I15520 I15520_I15520 1 4 SE Homo sapiens (modern human) double half /I15520_I15520_L1_R1.fastq.gz NA NA ERR12121150.fastq.gz NA -I15521 I15521_I15521 1 4 SE Homo sapiens (modern human) double half /I15521_I15521_L1_R1.fastq.gz NA NA ERR12121152.fastq.gz NA -I15522 I15522_I15522 1 4 SE Homo sapiens (modern human) double half /I15522_I15522_L1_R1.fastq.gz NA NA ERR12121154.fastq.gz NA -I15523 I15523_I15523 1 4 SE Homo sapiens (modern human) double half /I15523_I15523_L1_R1.fastq.gz NA NA ERR12121156.fastq.gz NA -I15524 I15524_I15524 1 4 SE Homo sapiens (modern human) double half /I15524_I15524_L1_R1.fastq.gz NA NA ERR12121158.fastq.gz NA -I15525 I15525_I15525 1 4 SE Homo sapiens (modern human) double half /I15525_I15525_L1_R1.fastq.gz NA NA ERR12121160.fastq.gz NA -I15526 I15526_I15526 1 4 SE Homo sapiens (modern human) double half /I15526_I15526_L1_R1.fastq.gz NA NA ERR12121162.fastq.gz NA -I15527 I15527_I15527 1 4 SE Homo sapiens (modern human) double half /I15527_I15527_L1_R1.fastq.gz NA NA ERR12121164.fastq.gz NA -I15528 I15528_I15528 1 4 SE Homo sapiens (modern human) double half /I15528_I15528_L1_R1.fastq.gz NA NA ERR12121166.fastq.gz NA -I15529 I15529_I15529 1 4 SE Homo sapiens (modern human) double half /I15529_I15529_L1_R1.fastq.gz NA NA ERR12121168.fastq.gz NA -I15530 I15530_I15530 1 4 SE Homo sapiens (modern human) double half /I15530_I15530_L1_R1.fastq.gz NA NA ERR12121170.fastq.gz NA -I15531 I15531_I15531 1 4 SE Homo sapiens (modern human) double half /I15531_I15531_L1_R1.fastq.gz NA NA ERR12121172.fastq.gz NA -I15532 I15532_I15532 1 4 SE Homo sapiens (modern human) double half 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-I35095 I35095_I35095 1 4 SE Homo sapiens (modern human) double half /I35095_I35095_L1_R1.fastq.gz NA NA ERR12121349.fastq.gz NA -I4664 I4664_I4664 1 4 SE Homo sapiens (modern human) double half /I4664_I4664_L1_R1.fastq.gz NA NA ERR12121352.fastq.gz NA -I4803 I4803_I4803 1 4 SE Homo sapiens (modern human) double half /I4803_I4803_L1_R1.fastq.gz NA NA ERR12121354.fastq.gz NA -I5404_ss I5404_ss_I5404_ss 1 4 SE Homo sapiens (modern human) single full /I5404_ss_I5404_ss_L1_R1.fastq.gz NA NA ERR12121357.fastq.gz NA From e7c75494ac087a7e4891ee7f8f335d6fc5195a7c Mon Sep 17 00:00:00 2001 From: danimfernandes Date: Tue, 27 Feb 2024 11:49:27 +0000 Subject: [PATCH 09/17] Delete packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv_patch.sh --- .../2024_OlaldeCarrion_Roman.tsv_patch.sh | 45 ------------------- 1 file changed, 45 deletions(-) delete mode 100755 packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv_patch.sh diff --git a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv_patch.sh b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv_patch.sh deleted file mode 100755 index 422e836..0000000 --- a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv_patch.sh +++ /dev/null @@ -1,45 +0,0 @@ -#!/usr/bin/env bash -set -uo pipefail ## Pipefail, complain on new unassigned variables. - -## Track the version of the TSV_patch template used -VERSION='0.2.0dev' - -## This script is applied to the eager input TSV file locally to edit the dummy -## path to the fastQ files added by `create_eager_input.sh` to a real local -## path provided as a positional argument. Any further local tweaks to the -## TSV before running eager should be added below that in the form of bash -## commands to aid in reproducibility. - -## usage tsv_patch.sh - -local_data_dir="$(readlink -f ${1})" -input_tsv="$(readlink -f ${2})" -output_tsv="$(dirname ${local_data_dir})/$(basename -s ".tsv" ${input_tsv}).finalised.tsv" -columns_to_keep=("Sample_Name" "Library_ID" "Lane" "Colour_Chemistry" "SeqType" "Organism" "Strandedness" "UDG_Treatment" "R1" "R2" "BAM") -source $(dirname ${2})/../../scripts/source_me.sh ## Load helper functions - -## Index non-proliferated columns and exclude them from the finalised TSV -cut_selector='' -tsv_header=($(head -n1 ${input_tsv})) -for col_name in ${columns_to_keep[@]}; do - let idx=$(get_index_of ${col_name} "${columns_to_keep[@]}")+1 ## awk uses 1-based indexing - if [[ ! ${idx} -eq -1 ]]; then - cut_selector+="${idx}," - fi -done - -## Remove added columns, and put columns in right order -cut -f ${cut_selector%,} ${input_tsv} > ${output_tsv} -sed -i -e "s||${local_data_dir}|g" ${output_tsv} - -## Any further commands to edit the file before finalisation should be added below as shown -# sed -ie 's/replace_this/with_this/g' ${output_tsv} - -## Keep track of versions -version_file="$(dirname ${input_tsv})/script_versions.txt" -## Remove versions from older run if there -grep -v -F -e "$(basename ${0})" -e "source_me.sh for final TSV" ${version_file} >${version_file}.new -## Then add new versions -echo -e "$(basename ${0}):\t${VERSION}" >> ${version_file}.new -echo -e "source_me.sh for final TSV:\t${HELPER_FUNCTION_VERSION}" >>${version_file}.new -mv ${version_file}.new ${version_file} From d6b48d43320ec09974eb6d8324c3bdeedc2952b7 Mon Sep 17 00:00:00 2001 From: danimfernandes Date: Tue, 27 Feb 2024 11:49:35 +0000 Subject: [PATCH 10/17] Delete packages/2024_OlaldeCarrion_Roman/script_versions.txt --- packages/2024_OlaldeCarrion_Roman/script_versions.txt | 2 -- 1 file changed, 2 deletions(-) delete mode 100644 packages/2024_OlaldeCarrion_Roman/script_versions.txt diff --git a/packages/2024_OlaldeCarrion_Roman/script_versions.txt b/packages/2024_OlaldeCarrion_Roman/script_versions.txt deleted file mode 100644 index be6857b..0000000 --- a/packages/2024_OlaldeCarrion_Roman/script_versions.txt +++ /dev/null @@ -1,2 +0,0 @@ -create_eager_input.sh: 0.2.1dev -source_me.sh for initial TSV: 0.2.1dev From 94251cafa2f0f08e643a7f4f82c0ed1ba4672ad1 Mon Sep 17 00:00:00 2001 From: delphis-bot Date: Tue, 27 Feb 2024 11:50:03 +0000 Subject: [PATCH 11/17] [automated] Create package recipe from SSF files --- .../2024_OlaldeCarrion_Roman.config | 41 +++++ .../2024_OlaldeCarrion_Roman.tsv | 140 ++++++++++++++++++ .../2024_OlaldeCarrion_Roman.tsv_patch.sh | 45 ++++++ .../script_versions.txt | 2 + 4 files changed, 228 insertions(+) create mode 100644 packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.config create mode 100644 packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv create mode 100755 packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv_patch.sh create mode 100644 packages/2024_OlaldeCarrion_Roman/script_versions.txt diff --git a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.config b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.config new file mode 100644 index 0000000..57c4b92 --- /dev/null +++ b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.config @@ -0,0 +1,41 @@ +// Keep track of config versions +minotaur_release='0.2.1' // The release tag of the poseidon-eager repository used for processing and config file retrieval +config_template_version='0.3.0dev' +package_config_version='0.3.0dev' +minotaur_config_base="https://raw.githubusercontent.com/poseidon-framework/poseidon-eager/${minotaur_release}/conf" + +// This configuration file is designed to be a used with the nf-core/eager pipeline. +// Instead of having to specify all other configurations for the Minotaur pipeline +// on runtime, they are all contained in this file and loaded automatically upon +// specifying this config file during runtime. Additionally, any parameters that +// need to be altered from the defaults can be specified here. +// +// The intention is to make it easy for users to understand and reproduce the output +// from processing with the Minotaur workflow processing from the contents of a +// single file. + +// Load configuration profiles. They are loaded from the minotaur_config_base URL, main branch. +includeConfig "${minotaur_config_base}/EVA_cluster.config" // Cluster-specific configurations for nf-core/eager execution at MPI-EVA +includeConfig "${minotaur_config_base}/Minotaur.config" // Default nf-core/eager parameters for Minotaur processing. + +// The following config file specifies BED files for on-target endogenous DNA calculation and mean coverage as well as pseudohaploid genotyping. +// TODO: Select the appropriate config for the CaptureType of the package. +includeConfig "${minotaur_config_base}/CaptureType_profiles/1240K.config" + +params { + // Keep track of config file versions used when processing + config_profile_description = "${config_profile_description}\n - config_template_version: ${config_template_version}\n - package_config_version: ${package_config_version}" + config_profile_contact = "Thiseas C. Lamnidis (@TCLamnidis)" + + /* + TODO: If you need to change any of the default processing parameters for this package + you can specify these parameters below. + Any parameters not specified in any of the config files default to their nf-core/eager default values. + + For information on all available parameters and their default values see: + https://nf-co.re/eager/2.4.6/parameters + + You can see the default values for parameters within poseidon-eager at: + https://github.com/poseidon-framework/poseidon-eager/blob/main/conf/Minotaur.config + */ +} diff --git a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv new file mode 100644 index 0000000..366f166 --- /dev/null +++ b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv @@ -0,0 +1,140 @@ +Sample_Name Library_ID Lane Colour_Chemistry SeqType Organism Strandedness UDG_Treatment R1 R2 BAM R1_target_file R2_target_file +I1116 I1116_I1116 1 4 SE Homo sapiens (modern human) double half /I1116_I1116_L1_R1.fastq.gz NA NA ERR12121073.fastq.gz NA +I12991 I12991_I12991 1 4 SE Homo sapiens (modern human) double half /I12991_I12991_L1_R1.fastq.gz NA NA ERR12121075.fastq.gz NA +I13458 I13458_I13458 1 4 SE Homo sapiens (modern human) double half /I13458_I13458_L1_R1.fastq.gz NA NA ERR12121077.fastq.gz NA +I15232 I15232_I15232 1 4 SE Homo sapiens (modern human) double half /I15232_I15232_L1_R1.fastq.gz NA NA ERR12121079.fastq.gz NA +I15485 I15485_I15485 1 4 SE Homo sapiens (modern human) double half /I15485_I15485_L1_R1.fastq.gz NA NA ERR12121081.fastq.gz NA +I15486 I15486_I15486 1 4 SE Homo sapiens (modern human) double half /I15486_I15486_L1_R1.fastq.gz NA NA ERR12121083.fastq.gz NA +I15487 I15487_I15487 1 4 SE Homo sapiens (modern human) double half /I15487_I15487_L1_R1.fastq.gz NA NA ERR12121085.fastq.gz NA +I15488 I15488_I15488 1 4 SE Homo sapiens (modern human) double half /I15488_I15488_L1_R1.fastq.gz NA NA ERR12121087.fastq.gz NA +I15489 I15489_I15489 1 4 SE Homo sapiens (modern human) double half /I15489_I15489_L1_R1.fastq.gz NA NA ERR12121089.fastq.gz NA +I15490 I15490_I15490 1 4 SE Homo sapiens (modern human) double half /I15490_I15490_L1_R1.fastq.gz NA NA ERR12121091.fastq.gz NA +I15491 I15491_I15491 1 4 SE Homo sapiens (modern human) double half /I15491_I15491_L1_R1.fastq.gz NA NA ERR12121093.fastq.gz NA +I15492 I15492_I15492 1 4 SE Homo sapiens (modern human) double half /I15492_I15492_L1_R1.fastq.gz NA NA ERR12121095.fastq.gz NA +I15493 I15493_I15493 1 4 SE Homo sapiens (modern human) double half /I15493_I15493_L1_R1.fastq.gz NA NA ERR12121097.fastq.gz NA +I15494 I15494_I15494 1 4 SE Homo sapiens (modern human) double half /I15494_I15494_L1_R1.fastq.gz NA NA ERR12121099.fastq.gz NA +I15495 I15495_I15495 1 4 SE Homo sapiens (modern human) double half /I15495_I15495_L1_R1.fastq.gz NA NA ERR12121101.fastq.gz NA +I15496 I15496_I15496 1 4 SE Homo sapiens (modern human) double half /I15496_I15496_L1_R1.fastq.gz NA NA ERR12121103.fastq.gz NA +I15497 I15497_I15497 1 4 SE Homo sapiens (modern human) double half /I15497_I15497_L1_R1.fastq.gz NA NA ERR12121105.fastq.gz NA +I15498 I15498_I15498 1 4 SE Homo sapiens (modern human) double half /I15498_I15498_L1_R1.fastq.gz NA NA ERR12121107.fastq.gz NA +I15499 I15499_I15499 1 4 SE Homo sapiens (modern human) double half /I15499_I15499_L1_R1.fastq.gz NA NA ERR12121109.fastq.gz NA +I15500 I15500_I15500 1 4 SE Homo sapiens (modern human) double half /I15500_I15500_L1_R1.fastq.gz NA NA ERR12121111.fastq.gz NA +I15501 I15501_I15501 1 4 SE Homo sapiens (modern human) double half /I15501_I15501_L1_R1.fastq.gz NA NA ERR12121113.fastq.gz NA +I15502 I15502_I15502 1 4 SE Homo sapiens (modern human) double half /I15502_I15502_L1_R1.fastq.gz NA NA ERR12121115.fastq.gz NA +I15503 I15503_I15503 1 4 SE Homo sapiens (modern human) double half /I15503_I15503_L1_R1.fastq.gz NA NA ERR12121117.fastq.gz NA +I15504 I15504_I15504 1 4 SE Homo sapiens (modern human) double half /I15504_I15504_L1_R1.fastq.gz NA NA ERR12121119.fastq.gz NA +I15505 I15505_I15505 1 4 SE Homo sapiens (modern human) double half /I15505_I15505_L1_R1.fastq.gz NA NA ERR12121121.fastq.gz NA +I15507 I15507_I15507 1 4 SE Homo sapiens (modern human) double half /I15507_I15507_L1_R1.fastq.gz NA NA ERR12121124.fastq.gz NA +I15508 I15508_I15508 1 4 SE Homo sapiens (modern human) double half /I15508_I15508_L1_R1.fastq.gz NA NA ERR12121126.fastq.gz NA +I15509 I15509_I15509 1 4 SE Homo sapiens (modern human) double half /I15509_I15509_L1_R1.fastq.gz NA NA ERR12121128.fastq.gz NA +I15510 I15510_I15510 1 4 SE Homo sapiens (modern human) double half /I15510_I15510_L1_R1.fastq.gz NA NA ERR12121130.fastq.gz NA +I15511 I15511_I15511 1 4 SE Homo sapiens (modern human) double half /I15511_I15511_L1_R1.fastq.gz NA NA ERR12121132.fastq.gz NA +I15512 I15512_I15512 1 4 SE Homo sapiens (modern human) double half /I15512_I15512_L1_R1.fastq.gz NA NA ERR12121134.fastq.gz NA +I15513 I15513_I15513 1 4 SE Homo sapiens (modern human) double half /I15513_I15513_L1_R1.fastq.gz NA NA ERR12121136.fastq.gz NA +I15514 I15514_I15514 1 4 SE Homo sapiens (modern human) double half /I15514_I15514_L1_R1.fastq.gz NA NA ERR12121138.fastq.gz NA +I15515 I15515_I15515 1 4 SE Homo sapiens (modern human) double half /I15515_I15515_L1_R1.fastq.gz NA NA ERR12121140.fastq.gz NA +I15516 I15516_I15516 1 4 SE Homo sapiens (modern human) double half /I15516_I15516_L1_R1.fastq.gz NA NA ERR12121142.fastq.gz NA +I15517 I15517_I15517 1 4 SE Homo sapiens (modern human) double half /I15517_I15517_L1_R1.fastq.gz NA NA ERR12121144.fastq.gz NA +I15518 I15518_I15518 1 4 SE Homo sapiens (modern human) double half /I15518_I15518_L1_R1.fastq.gz NA NA ERR12121146.fastq.gz NA +I15519 I15519_I15519 1 4 SE Homo sapiens (modern human) double half /I15519_I15519_L1_R1.fastq.gz NA NA ERR12121148.fastq.gz NA +I15520 I15520_I15520 1 4 SE Homo sapiens (modern human) double half /I15520_I15520_L1_R1.fastq.gz NA NA ERR12121150.fastq.gz NA +I15521 I15521_I15521 1 4 SE Homo sapiens (modern human) double half /I15521_I15521_L1_R1.fastq.gz NA NA ERR12121152.fastq.gz NA +I15522 I15522_I15522 1 4 SE Homo sapiens (modern human) double half /I15522_I15522_L1_R1.fastq.gz NA NA ERR12121154.fastq.gz NA +I15523 I15523_I15523 1 4 SE Homo sapiens (modern human) double half /I15523_I15523_L1_R1.fastq.gz NA NA ERR12121156.fastq.gz NA +I15524 I15524_I15524 1 4 SE Homo sapiens (modern human) double half /I15524_I15524_L1_R1.fastq.gz NA NA ERR12121158.fastq.gz NA +I15525 I15525_I15525 1 4 SE Homo sapiens (modern human) double half /I15525_I15525_L1_R1.fastq.gz NA NA ERR12121160.fastq.gz NA +I15526 I15526_I15526 1 4 SE Homo sapiens (modern human) double half /I15526_I15526_L1_R1.fastq.gz NA NA ERR12121162.fastq.gz NA +I15527 I15527_I15527 1 4 SE Homo sapiens (modern human) double half /I15527_I15527_L1_R1.fastq.gz NA NA ERR12121164.fastq.gz NA +I15528 I15528_I15528 1 4 SE Homo sapiens (modern human) double half /I15528_I15528_L1_R1.fastq.gz NA NA ERR12121166.fastq.gz NA +I15529 I15529_I15529 1 4 SE Homo sapiens (modern human) double half /I15529_I15529_L1_R1.fastq.gz NA NA ERR12121168.fastq.gz NA +I15530 I15530_I15530 1 4 SE Homo sapiens (modern human) double half /I15530_I15530_L1_R1.fastq.gz NA NA ERR12121170.fastq.gz NA +I15531 I15531_I15531 1 4 SE Homo sapiens (modern human) double half /I15531_I15531_L1_R1.fastq.gz NA NA ERR12121172.fastq.gz NA +I15532 I15532_I15532 1 4 SE Homo sapiens (modern human) double half /I15532_I15532_L1_R1.fastq.gz NA NA ERR12121174.fastq.gz NA +I15533 I15533_I15533 1 4 SE Homo sapiens (modern human) double half /I15533_I15533_L1_R1.fastq.gz NA NA ERR12121176.fastq.gz NA +I15534 I15534_I15534 1 4 SE Homo sapiens (modern human) double half /I15534_I15534_L1_R1.fastq.gz NA NA ERR12121178.fastq.gz NA +I15535 I15535_I15535 1 4 SE Homo sapiens (modern human) double half /I15535_I15535_L1_R1.fastq.gz NA NA ERR12121180.fastq.gz NA +I15536 I15536_I15536 1 4 SE Homo sapiens (modern human) double half /I15536_I15536_L1_R1.fastq.gz NA NA ERR12121182.fastq.gz NA +I15537 I15537_I15537 1 4 SE Homo sapiens (modern human) double half /I15537_I15537_L1_R1.fastq.gz NA NA ERR12121184.fastq.gz NA +I15538 I15538_I15538_1240k 1 4 SE Homo sapiens (modern human) double half /I15538_I15538_1240k_L1_R1.fastq.gz NA NA ERR12121186.fastq.gz NA +I15539 I15539_I15539_1240k 1 4 SE Homo sapiens (modern human) double half /I15539_I15539_1240k_L1_R1.fastq.gz NA NA ERR12121189.fastq.gz NA +I15540 I15540_I15540 1 4 SE Homo sapiens (modern human) double half /I15540_I15540_L1_R1.fastq.gz NA NA ERR12121192.fastq.gz NA +I15541 I15541_I15541 1 4 SE Homo sapiens (modern human) double half /I15541_I15541_L1_R1.fastq.gz NA NA ERR12121194.fastq.gz NA +I15542 I15542_I15542 1 4 SE Homo sapiens (modern human) double half /I15542_I15542_L1_R1.fastq.gz NA NA ERR12121196.fastq.gz NA +I15543 I15543_I15543 1 4 SE Homo sapiens (modern human) double half /I15543_I15543_L1_R1.fastq.gz NA NA ERR12121198.fastq.gz NA +I15544 I15544_I15544 1 4 SE Homo sapiens (modern human) double half /I15544_I15544_L1_R1.fastq.gz NA NA ERR12121200.fastq.gz NA +I15545 I15545_I15545 1 4 SE Homo sapiens (modern human) double half /I15545_I15545_L1_R1.fastq.gz NA NA ERR12121202.fastq.gz NA +I15546 I15546_I15546 1 4 SE Homo sapiens (modern human) double half /I15546_I15546_L1_R1.fastq.gz NA NA ERR12121204.fastq.gz NA +I15547 I15547_I15547 1 4 SE Homo sapiens (modern human) double half /I15547_I15547_L1_R1.fastq.gz NA NA ERR12121206.fastq.gz NA +I15548 I15548_I15548 1 4 SE Homo sapiens (modern human) double half /I15548_I15548_L1_R1.fastq.gz NA NA ERR12121208.fastq.gz NA +I15549 I15549_I15549 1 4 SE Homo sapiens (modern human) double half /I15549_I15549_L1_R1.fastq.gz NA NA ERR12121210.fastq.gz NA +I15550 I15550_I15550 1 4 SE Homo sapiens (modern human) double half /I15550_I15550_L1_R1.fastq.gz NA NA ERR12121212.fastq.gz NA +I15551 I15551_I15551 1 4 SE Homo sapiens (modern human) double half /I15551_I15551_L1_R1.fastq.gz NA NA ERR12121214.fastq.gz NA +I15552 I15552_I15552 1 4 SE Homo sapiens (modern human) double half /I15552_I15552_L1_R1.fastq.gz NA NA ERR12121216.fastq.gz NA +I15553 I15553_I15553 1 4 SE Homo sapiens (modern human) double half /I15553_I15553_L1_R1.fastq.gz NA NA ERR12121218.fastq.gz NA +I15554 I15554_I15554 1 4 SE Homo sapiens (modern human) double half /I15554_I15554_L1_R1.fastq.gz NA NA ERR12121220.fastq.gz NA +I15555 I15555_I15555 1 4 SE Homo sapiens (modern human) double half /I15555_I15555_L1_R1.fastq.gz NA NA ERR12121222.fastq.gz NA +I24343 I24343_I24343 1 4 SE Homo sapiens (modern human) double half /I24343_I24343_L1_R1.fastq.gz NA NA ERR12121225.fastq.gz NA +I26702 I26702_I26702 1 4 SE Homo sapiens (modern human) double half /I26702_I26702_L1_R1.fastq.gz NA NA ERR12121227.fastq.gz NA +I26703 I26703_I26703 1 4 SE Homo sapiens (modern human) double half /I26703_I26703_L1_R1.fastq.gz NA NA ERR12121229.fastq.gz NA +I26704 I26704_I26704 1 4 SE Homo sapiens (modern human) double half /I26704_I26704_L1_R1.fastq.gz NA NA ERR12121231.fastq.gz NA +I26705 I26705_I26705 1 4 SE Homo sapiens (modern human) double half /I26705_I26705_L1_R1.fastq.gz NA NA ERR12121233.fastq.gz NA +I26707 I26707_I26707 1 4 SE Homo sapiens (modern human) double half /I26707_I26707_L1_R1.fastq.gz NA NA ERR12121235.fastq.gz NA +I26708 I26708_I26708 1 4 SE Homo sapiens (modern human) double half /I26708_I26708_L1_R1.fastq.gz NA NA ERR12121237.fastq.gz NA +I26709 I26709_I26709 1 4 SE Homo sapiens (modern human) double half /I26709_I26709_L1_R1.fastq.gz NA NA ERR12121239.fastq.gz NA +I26714 I26714_I26714 1 4 SE Homo sapiens (modern human) double half /I26714_I26714_L1_R1.fastq.gz NA NA ERR12121241.fastq.gz NA +I26718 I26718_I26718 1 4 SE Homo sapiens (modern human) double half /I26718_I26718_L1_R1.fastq.gz NA NA ERR12121243.fastq.gz NA +I26719 I26719_I26719 1 4 SE Homo sapiens (modern human) double half /I26719_I26719_L1_R1.fastq.gz NA NA ERR12121245.fastq.gz NA +I26745 I26745_I26745 1 4 SE Homo sapiens (modern human) double half /I26745_I26745_L1_R1.fastq.gz NA NA ERR12121247.fastq.gz NA +I26746 I26746_I26746 1 4 SE Homo sapiens (modern human) double half /I26746_I26746_L1_R1.fastq.gz NA NA ERR12121249.fastq.gz NA +I26747 I26747_I26747 1 4 SE Homo sapiens (modern human) double half /I26747_I26747_L1_R1.fastq.gz NA NA ERR12121251.fastq.gz NA +I26748 I26748_I26748 1 4 SE Homo sapiens (modern human) double half /I26748_I26748_L1_R1.fastq.gz NA NA ERR12121253.fastq.gz NA +I26749 I26749_I26749 1 4 SE Homo sapiens (modern human) double half /I26749_I26749_L1_R1.fastq.gz NA NA ERR12121255.fastq.gz NA +I26750 I26750_I26750 1 4 SE Homo sapiens (modern human) double half /I26750_I26750_L1_R1.fastq.gz NA NA ERR12121257.fastq.gz NA +I26751 I26751_I26751 1 4 SE Homo sapiens (modern human) double half /I26751_I26751_L1_R1.fastq.gz NA NA ERR12121259.fastq.gz NA +I26752 I26752_I26752 1 4 SE Homo sapiens (modern human) double half /I26752_I26752_L1_R1.fastq.gz NA NA ERR12121261.fastq.gz NA +I26753 I26753_I26753 1 4 SE Homo sapiens (modern human) double half /I26753_I26753_L1_R1.fastq.gz NA NA ERR12121263.fastq.gz NA +I26754 I26754_I26754 1 4 SE Homo sapiens (modern human) double half /I26754_I26754_L1_R1.fastq.gz NA NA ERR12121265.fastq.gz NA +I26761 I26761_I26761 1 4 SE Homo sapiens (modern human) double half /I26761_I26761_L1_R1.fastq.gz NA NA ERR12121267.fastq.gz NA +I26762 I26762_I26762 1 4 SE Homo sapiens (modern human) double half /I26762_I26762_L1_R1.fastq.gz NA NA ERR12121269.fastq.gz NA +I26763 I26763_I26763 1 4 SE Homo sapiens (modern human) double half /I26763_I26763_L1_R1.fastq.gz NA NA ERR12121271.fastq.gz NA +I26764 I26764_I26764 1 4 SE Homo sapiens (modern human) double half /I26764_I26764_L1_R1.fastq.gz NA NA ERR12121273.fastq.gz NA +I26765 I26765_I26765 1 4 SE Homo sapiens (modern human) double half /I26765_I26765_L1_R1.fastq.gz NA NA ERR12121275.fastq.gz NA 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/I27295_I27295_L1_R1.fastq.gz NA NA ERR12121291.fastq.gz NA +I27296 I27296_I27296 1 4 SE Homo sapiens (modern human) double half /I27296_I27296_L1_R1.fastq.gz NA NA ERR12121293.fastq.gz NA +I27297 I27297_I27297 1 4 SE Homo sapiens (modern human) double half /I27297_I27297_L1_R1.fastq.gz NA NA ERR12121295.fastq.gz NA +I27298 I27298_I27298 1 4 SE Homo sapiens (modern human) double half /I27298_I27298_L1_R1.fastq.gz NA NA ERR12121297.fastq.gz NA +I28388 I28388_I28388 1 4 SE Homo sapiens (modern human) double half /I28388_I28388_L1_R1.fastq.gz NA NA ERR12121299.fastq.gz NA +I28390 I28390_I28390 1 4 SE Homo sapiens (modern human) double half /I28390_I28390_L1_R1.fastq.gz NA NA ERR12121301.fastq.gz NA +I28392 I28392_I28392 1 4 SE Homo sapiens (modern human) double half /I28392_I28392_L1_R1.fastq.gz NA NA ERR12121303.fastq.gz NA +I28393 I28393_I28393 1 4 SE Homo sapiens (modern human) double half /I28393_I28393_L1_R1.fastq.gz NA NA ERR12121305.fastq.gz NA +I28394 I28394_I28394 1 4 SE Homo 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(modern human) single full /I5404_ss_I5404_ss_L1_R1.fastq.gz NA NA ERR12121357.fastq.gz NA diff --git a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv_patch.sh b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv_patch.sh new file mode 100755 index 0000000..422e836 --- /dev/null +++ b/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv_patch.sh @@ -0,0 +1,45 @@ +#!/usr/bin/env bash +set -uo pipefail ## Pipefail, complain on new unassigned variables. + +## Track the version of the TSV_patch template used +VERSION='0.2.0dev' + +## This script is applied to the eager input TSV file locally to edit the dummy +## path to the fastQ files added by `create_eager_input.sh` to a real local +## path provided as a positional argument. Any further local tweaks to the +## TSV before running eager should be added below that in the form of bash +## commands to aid in reproducibility. + +## usage tsv_patch.sh + +local_data_dir="$(readlink -f ${1})" +input_tsv="$(readlink -f ${2})" +output_tsv="$(dirname ${local_data_dir})/$(basename -s ".tsv" ${input_tsv}).finalised.tsv" +columns_to_keep=("Sample_Name" "Library_ID" "Lane" "Colour_Chemistry" "SeqType" "Organism" "Strandedness" "UDG_Treatment" "R1" "R2" "BAM") +source $(dirname ${2})/../../scripts/source_me.sh ## Load helper functions + +## Index non-proliferated columns and exclude them from the finalised TSV +cut_selector='' +tsv_header=($(head -n1 ${input_tsv})) +for col_name in ${columns_to_keep[@]}; do + let idx=$(get_index_of ${col_name} "${columns_to_keep[@]}")+1 ## awk uses 1-based indexing + if [[ ! ${idx} -eq -1 ]]; then + cut_selector+="${idx}," + fi +done + +## Remove added columns, and put columns in right order +cut -f ${cut_selector%,} ${input_tsv} > ${output_tsv} +sed -i -e "s||${local_data_dir}|g" ${output_tsv} + +## Any further commands to edit the file before finalisation should be added below as shown +# sed -ie 's/replace_this/with_this/g' ${output_tsv} + +## Keep track of versions +version_file="$(dirname ${input_tsv})/script_versions.txt" +## Remove versions from older run if there +grep -v -F -e "$(basename ${0})" -e "source_me.sh for final TSV" ${version_file} >${version_file}.new +## Then add new versions +echo -e "$(basename ${0}):\t${VERSION}" >> ${version_file}.new +echo -e "source_me.sh for final TSV:\t${HELPER_FUNCTION_VERSION}" >>${version_file}.new +mv ${version_file}.new ${version_file} diff --git a/packages/2024_OlaldeCarrion_Roman/script_versions.txt b/packages/2024_OlaldeCarrion_Roman/script_versions.txt new file mode 100644 index 0000000..be6857b --- /dev/null +++ b/packages/2024_OlaldeCarrion_Roman/script_versions.txt @@ -0,0 +1,2 @@ +create_eager_input.sh: 0.2.1dev +source_me.sh for initial TSV: 0.2.1dev From 45e88b699f8bc139992416baec8bf504c869ff47 Mon Sep 17 00:00:00 2001 From: "Thiseas C. Lamnidis" Date: Wed, 28 Feb 2024 15:57:40 +0100 Subject: [PATCH 12/17] Rename 2024_OlaldeCarrion_Roman.config to 2023_OlaldeCarrion_Roman.config --- ...OlaldeCarrion_Roman.config => 2023_OlaldeCarrion_Roman.config} | 0 1 file changed, 0 insertions(+), 0 deletions(-) rename packages/2024_OlaldeCarrion_Roman/{2024_OlaldeCarrion_Roman.config => 2023_OlaldeCarrion_Roman.config} (100%) diff --git a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.config b/packages/2024_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.config similarity index 100% rename from packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.config rename to packages/2024_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.config From c824ea1dc99c233c0369ff38e6acaac381c1349e Mon Sep 17 00:00:00 2001 From: "Thiseas C. Lamnidis" Date: Wed, 28 Feb 2024 15:58:20 +0100 Subject: [PATCH 13/17] Rename 2024_OlaldeCarrion_Roman.ssf to 2023_OlaldeCarrion_Roman.ssf --- ...{2024_OlaldeCarrion_Roman.ssf => 2023_OlaldeCarrion_Roman.ssf} | 0 1 file changed, 0 insertions(+), 0 deletions(-) rename packages/2024_OlaldeCarrion_Roman/{2024_OlaldeCarrion_Roman.ssf => 2023_OlaldeCarrion_Roman.ssf} (100%) diff --git a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.ssf b/packages/2024_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.ssf similarity index 100% rename from packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.ssf rename to packages/2024_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.ssf From 67748af295ab95a3bf3c7662cd03d8d8c9a391d0 Mon Sep 17 00:00:00 2001 From: "Thiseas C. Lamnidis" Date: Wed, 28 Feb 2024 15:58:28 +0100 Subject: [PATCH 14/17] Rename 2024_OlaldeCarrion_Roman.tsv to 2023_OlaldeCarrion_Roman.tsv --- ...{2024_OlaldeCarrion_Roman.tsv => 2023_OlaldeCarrion_Roman.tsv} | 0 1 file changed, 0 insertions(+), 0 deletions(-) rename packages/2024_OlaldeCarrion_Roman/{2024_OlaldeCarrion_Roman.tsv => 2023_OlaldeCarrion_Roman.tsv} (100%) diff --git a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv b/packages/2024_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.tsv similarity index 100% rename from packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv rename to packages/2024_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.tsv From 2062a38b75c4509978612bb0e6242d4eab784be1 Mon Sep 17 00:00:00 2001 From: "Thiseas C. Lamnidis" Date: Wed, 28 Feb 2024 15:58:35 +0100 Subject: [PATCH 15/17] Rename 2024_OlaldeCarrion_Roman.tsv_patch.sh to 2023_OlaldeCarrion_Roman.tsv_patch.sh --- ...n_Roman.tsv_patch.sh => 2023_OlaldeCarrion_Roman.tsv_patch.sh} | 0 1 file changed, 0 insertions(+), 0 deletions(-) rename packages/2024_OlaldeCarrion_Roman/{2024_OlaldeCarrion_Roman.tsv_patch.sh => 2023_OlaldeCarrion_Roman.tsv_patch.sh} (100%) diff --git a/packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv_patch.sh b/packages/2024_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.tsv_patch.sh similarity index 100% rename from packages/2024_OlaldeCarrion_Roman/2024_OlaldeCarrion_Roman.tsv_patch.sh rename to packages/2024_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.tsv_patch.sh From 1793d265d3c447d36f162dd40fd1cb2c4c0f7c92 Mon Sep 17 00:00:00 2001 From: Thiseas Christos Lamnidis Date: Wed, 28 Feb 2024 16:02:33 +0100 Subject: [PATCH 16/17] Rename 2024_OlaldeCarrion_Roman to 2023_OlaldeCarrion_Roman --- .../2023_OlaldeCarrion_Roman.config | 0 .../2023_OlaldeCarrion_Roman.ssf | 0 .../2023_OlaldeCarrion_Roman.tsv | 0 .../2023_OlaldeCarrion_Roman.tsv_patch.sh | 0 .../script_versions.txt | 0 5 files changed, 0 insertions(+), 0 deletions(-) rename packages/{2024_OlaldeCarrion_Roman => 2023_OlaldeCarrion_Roman}/2023_OlaldeCarrion_Roman.config (100%) rename packages/{2024_OlaldeCarrion_Roman => 2023_OlaldeCarrion_Roman}/2023_OlaldeCarrion_Roman.ssf (100%) rename packages/{2024_OlaldeCarrion_Roman => 2023_OlaldeCarrion_Roman}/2023_OlaldeCarrion_Roman.tsv (100%) rename packages/{2024_OlaldeCarrion_Roman => 2023_OlaldeCarrion_Roman}/2023_OlaldeCarrion_Roman.tsv_patch.sh (100%) rename packages/{2024_OlaldeCarrion_Roman => 2023_OlaldeCarrion_Roman}/script_versions.txt (100%) diff --git a/packages/2024_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.config b/packages/2023_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.config similarity index 100% rename from packages/2024_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.config rename to packages/2023_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.config diff --git a/packages/2024_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.ssf b/packages/2023_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.ssf similarity index 100% rename from packages/2024_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.ssf rename to packages/2023_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.ssf diff --git a/packages/2024_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.tsv b/packages/2023_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.tsv similarity index 100% rename from packages/2024_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.tsv rename to packages/2023_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.tsv diff --git a/packages/2024_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.tsv_patch.sh b/packages/2023_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.tsv_patch.sh similarity index 100% rename from packages/2024_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.tsv_patch.sh rename to packages/2023_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.tsv_patch.sh diff --git a/packages/2024_OlaldeCarrion_Roman/script_versions.txt b/packages/2023_OlaldeCarrion_Roman/script_versions.txt similarity index 100% rename from packages/2024_OlaldeCarrion_Roman/script_versions.txt rename to packages/2023_OlaldeCarrion_Roman/script_versions.txt From 07eb5ca0f026f3204ba7ffa705c17c3213919e68 Mon Sep 17 00:00:00 2001 From: "Thiseas C. Lamnidis" Date: Wed, 28 Feb 2024 16:07:42 +0100 Subject: [PATCH 17/17] Remove TODOs from config --- .../2023_OlaldeCarrion_Roman.config | 13 ------------- 1 file changed, 13 deletions(-) diff --git a/packages/2023_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.config b/packages/2023_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.config index 57c4b92..1435f89 100644 --- a/packages/2023_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.config +++ b/packages/2023_OlaldeCarrion_Roman/2023_OlaldeCarrion_Roman.config @@ -19,23 +19,10 @@ includeConfig "${minotaur_config_base}/EVA_cluster.config" // Cluster-specific c includeConfig "${minotaur_config_base}/Minotaur.config" // Default nf-core/eager parameters for Minotaur processing. // The following config file specifies BED files for on-target endogenous DNA calculation and mean coverage as well as pseudohaploid genotyping. -// TODO: Select the appropriate config for the CaptureType of the package. includeConfig "${minotaur_config_base}/CaptureType_profiles/1240K.config" params { // Keep track of config file versions used when processing config_profile_description = "${config_profile_description}\n - config_template_version: ${config_template_version}\n - package_config_version: ${package_config_version}" config_profile_contact = "Thiseas C. Lamnidis (@TCLamnidis)" - - /* - TODO: If you need to change any of the default processing parameters for this package - you can specify these parameters below. - Any parameters not specified in any of the config files default to their nf-core/eager default values. - - For information on all available parameters and their default values see: - https://nf-co.re/eager/2.4.6/parameters - - You can see the default values for parameters within poseidon-eager at: - https://github.com/poseidon-framework/poseidon-eager/blob/main/conf/Minotaur.config - */ }