diff --git a/src/Poseidon/CLI/OptparseApplicativeParsers.hs b/src/Poseidon/CLI/OptparseApplicativeParsers.hs index 54590e54..bbe49b5b 100644 --- a/src/Poseidon/CLI/OptparseApplicativeParsers.hs +++ b/src/Poseidon/CLI/OptparseApplicativeParsers.hs @@ -557,9 +557,9 @@ parseMaybeOutPackagePath = OP.option (Just <$> OP.str) ( OP.short 'o' <> OP.long "outPackagePath" <> OP.metavar "DIR" <> - OP.help "Path to the output package directory. This is optional: If no path is provided, \ - \then the output is written to the directories where the input genotype data file \ - \(.bed/.geno) is stored." <> + OP.help "Path for the converted genotype files to be written to. If a path is provided, only the converted genotype \ + \files are written out, with no change of the original package. If no path is provided, \ + \genotype files will be converted in-place, including a change in the POSEIDON.yml file to yield an updated valid package" <> OP.value Nothing <> OP.showDefault )