Tools for performing mass isotopomer distribution analysis (MIDA). Basically, this is dynamic isotope analysis useful for mass spectrometry experiments involving protein turnover.
NOTE: requires ruby >= 2.0
Until the Mercury7 algorithm is implemented you will need the fftw3 gem installed. It depends on the fftw3 library. On Ubuntu/Debian, it's as easy as this:
sudo apt-get install libfftw3-dev
Then
sudo gem install diadem
Run diadem-cubic.rb from the commandline with no args to get help:
diadem-cubic.rb
GNU Public License version 3 (see LICENSE.txt). Please contact the authors for consideration of releasing the software under different terms.
Diadem stands for Dynamic Isotope Analysis DEMystified or maybe Dynamic Isotope Analysis DEMarcated.