From 664c5c95290079c896af58216c21e2c6813d1075 Mon Sep 17 00:00:00 2001 From: landinjm <123970616+landinjm@users.noreply.github.com> Date: Fri, 20 Dec 2024 23:44:14 +0000 Subject: [PATCH] =?UTF-8?q?Deploying=20to=20gh-pages=20from=20@=20prisms-c?= =?UTF-8?q?enter/phaseField@a076c628b8f3c085c0f0309bdafab8cf1b8685e0=20?= =?UTF-8?q?=F0=9F=9A=80?= MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit --- .../classvariableAttributeLoader-members.html | 4 + doxygen/classvariableAttributeLoader.html | 188 +++++++++++++++++- doxygen/classvariableAttributeLoader.js | 4 + doxygen/functions.html | 12 ++ doxygen/functions_func.html | 12 ++ doxygen/navtreedata.js | 10 +- doxygen/navtreeindex0.js | 6 +- doxygen/navtreeindex1.js | 6 +- doxygen/navtreeindex2.js | 6 +- doxygen/navtreeindex3.js | 44 ++-- doxygen/navtreeindex4.js | 10 +- doxygen/search/all_10.js | 56 +++--- doxygen/search/all_11.js | 6 +- doxygen/search/all_12.js | 2 +- doxygen/search/all_13.js | 18 +- doxygen/search/all_14.js | 2 +- doxygen/search/all_15.js | 2 +- doxygen/search/all_8.js | 20 +- doxygen/search/all_9.js | 10 +- doxygen/search/all_a.js | 8 +- doxygen/search/all_b.js | 12 +- doxygen/search/all_c.js | 10 +- doxygen/search/all_d.js | 62 +++--- doxygen/search/all_e.js | 20 +- doxygen/search/all_f.js | 22 +- doxygen/search/classes_0.js | 2 +- doxygen/search/classes_1.js | 6 +- doxygen/search/classes_10.js | 14 +- doxygen/search/classes_2.js | 2 +- doxygen/search/classes_3.js | 4 +- doxygen/search/classes_4.js | 2 +- doxygen/search/classes_5.js | 30 +-- doxygen/search/classes_6.js | 14 +- doxygen/search/classes_7.js | 2 +- doxygen/search/classes_8.js | 6 +- doxygen/search/classes_9.js | 10 +- doxygen/search/classes_a.js | 2 +- doxygen/search/classes_b.js | 48 ++--- doxygen/search/classes_c.js | 18 +- doxygen/search/classes_d.js | 2 +- doxygen/search/classes_e.js | 8 +- doxygen/search/classes_f.js | 2 +- doxygen/search/functions_0.js | 18 +- doxygen/search/functions_1.js | 4 +- doxygen/search/functions_10.js | 4 +- doxygen/search/functions_11.js | 2 +- doxygen/search/functions_2.js | 10 +- doxygen/search/functions_3.js | 4 +- doxygen/search/functions_4.js | 2 +- doxygen/search/functions_5.js | 6 +- doxygen/search/functions_6.js | 58 +++--- doxygen/search/functions_7.js | 10 +- doxygen/search/functions_8.js | 8 +- doxygen/search/functions_9.js | 4 +- doxygen/search/functions_a.js | 2 +- doxygen/search/functions_b.js | 6 +- doxygen/search/functions_c.js | 14 +- doxygen/search/functions_d.js | 48 ++--- doxygen/search/functions_e.js | 2 +- doxygen/search/functions_f.js | 2 +- doxygen/search/namespaces_0.js | 2 +- doxygen/search/pages_0.js | 2 +- doxygen/search/pages_1.js | 8 +- doxygen/search/pages_2.js | 2 +- doxygen/search/pages_3.js | 2 +- doxygen/search/pages_4.js | 2 +- doxygen/search/pages_5.js | 2 +- doxygen/search/pages_6.js | 4 +- doxygen/search/pages_7.js | 2 +- doxygen/search/variables_0.js | 2 +- doxygen/search/variables_1.js | 4 +- doxygen/search/variables_2.js | 2 +- doxygen/search/variables_3.js | 4 +- doxygen/search/variables_4.js | 2 +- doxygen/search/variables_5.js | 2 +- doxygen/search/variables_6.js | 4 +- doxygen/search/variables_7.js | 4 +- doxygen/search/variables_8.js | 2 +- doxygen/search/variables_9.js | 4 +- doxygen/search/variables_a.js | 2 +- .../variableAttributeLoader_8h_source.html | 156 +++++++++------ 81 files changed, 691 insertions(+), 451 deletions(-) diff --git a/doxygen/classvariableAttributeLoader-members.html b/doxygen/classvariableAttributeLoader-members.html index f0da1fab..b6d7c949 100644 --- a/doxygen/classvariableAttributeLoader-members.html +++ b/doxygen/classvariableAttributeLoader-members.html @@ -93,6 +93,10 @@ + + + + diff --git a/doxygen/classvariableAttributeLoader.html b/doxygen/classvariableAttributeLoader.html index 14b24b0f..c642b9a3 100644 --- a/doxygen/classvariableAttributeLoader.html +++ b/doxygen/classvariableAttributeLoader.html @@ -122,17 +122,33 @@ - + - + - + - + + + + + + + + + + + + + + + + + @@ -169,6 +185,162 @@

Detailed Description

Class to manage the variable attributes that the user specifies.

Member Function Documentation

+ +

◆ insert_dependencies_gradient_term_LHS()

+ +
+
+
+template<typename Iterable >
+
get_pp_attributes() constvariableAttributeLoader
get_var_attributes() constvariableAttributeLoader
insert_dependencies_gradient_term_LHS(const unsigned int &index, const Iterable &dependencies) constvariableAttributeLoader
insert_dependencies_gradient_term_RHS(const unsigned int &index, const Iterable &dependencies)variableAttributeLoader
insert_dependencies_value_term_LHS(const unsigned int &index, const Iterable &dependencies) constvariableAttributeLoader
insert_dependencies_value_term_RHS(const unsigned int &index, const Iterable &dependencies)variableAttributeLoader
loadPostProcessorVariableAttributes()variableAttributeLoader
loadVariableAttributes()variableAttributeLoader
pp_attributesvariableAttributeLoader
 Set the PDE type of the variable at index to var_eq_type where var_eq_typecan be EXPLICIT_TIME_DEPENDENT, IMPLICIT_TIME_DEPENDENT, TIME_INDEPENDENT, AUXILIARY. More...
 
void set_dependencies_value_term_RHS (const unsigned int &index, const std::string &dependencies)
 Set the dependencies for the value term of the RHS equation of the variable at index. More...
 Add dependencies for the value term of the RHS equation of the variable at index. More...
 
void set_dependencies_gradient_term_RHS (const unsigned int &index, const std::string &dependencies)
 Set the dependencies for the gradient term of the RHS equation of the variable at index. More...
 Add dependencies for the gradient term of the RHS equation of the variable at index. More...
 
void set_dependencies_value_term_LHS (const unsigned int &index, const std::string &dependencies) const
 Set the dependencies for the value term of the LHS equation of the variable at index. More...
 Add dependencies for the value term of the LHS equation of the variable at index. More...
 
void set_dependencies_gradient_term_LHS (const unsigned int &index, const std::string &dependencies) const
 Set the dependencies for the gradient term of the LHS equation of the variable at index. More...
 Add dependencies for the gradient term of the LHS equation of the variable at index. More...
 
template<typename Iterable >
void insert_dependencies_value_term_RHS (const unsigned int &index, const Iterable &dependencies)
 Insert dependencies for the value term of the RHS equation of the variable at index. More...
 
template<typename Iterable >
void insert_dependencies_gradient_term_RHS (const unsigned int &index, const Iterable &dependencies)
 Insert dependencies for the gradient term of the RHS equation of the variable at index. More...
 
template<typename Iterable >
void insert_dependencies_value_term_LHS (const unsigned int &index, const Iterable &dependencies) const
 Insert dependencies for the value term of the LHS equation of the variable at index. More...
 
template<typename Iterable >
void insert_dependencies_gradient_term_LHS (const unsigned int &index, const Iterable &dependencies) const
 Insert dependencies for the gradient term of the LHS equation of the variable at index. More...
 
void set_need_value_nucleation (const unsigned int &index, const bool &flag) const
 Flag whether the variable at index is needed to calculate the nucleation probability. More...
 
+ + + + + + + + + + + + + + + + + +
void variableAttributeLoader::insert_dependencies_gradient_term_LHS (const unsigned int & index,
const Iterable & dependencies 
) const
+
+ +

Insert dependencies for the gradient term of the LHS equation of the variable at index.

+
Parameters
+ + + +
indexIndex of variable
dependenciesContainer containing list of dependency strings for variable at index Hint: {"variable", "grad(variable)", "hess(variable)"}
+
+
+ +
+ + +

◆ insert_dependencies_gradient_term_RHS()

+ +
+
+
+template<typename Iterable >
+ + + + + + + + + + + + + + + + + + +
void variableAttributeLoader::insert_dependencies_gradient_term_RHS (const unsigned int & index,
const Iterable & dependencies 
)
+
+ +

Insert dependencies for the gradient term of the RHS equation of the variable at index.

+
Parameters
+ + + +
indexIndex of variable
dependenciesContainer containing list of dependency strings for variable at index Hint: {"variable", "grad(variable)", "hess(variable)"}
+
+
+ +
+
+ +

◆ insert_dependencies_value_term_LHS()

+ +
+
+
+template<typename Iterable >
+ + + + + + + + + + + + + + + + + + +
void variableAttributeLoader::insert_dependencies_value_term_LHS (const unsigned int & index,
const Iterable & dependencies 
) const
+
+ +

Insert dependencies for the value term of the LHS equation of the variable at index.

+
Parameters
+ + + +
indexIndex of variable
dependenciesContainer containing list of dependency strings for variable at index Hint: {"variable", "grad(variable)", "hess(variable)"}
+
+
+ +
+
+ +

◆ insert_dependencies_value_term_RHS()

+ +
+
+
+template<typename Iterable >
+ + + + + + + + + + + + + + + + + + +
void variableAttributeLoader::insert_dependencies_value_term_RHS (const unsigned int & index,
const Iterable & dependencies 
)
+
+ +

Insert dependencies for the value term of the RHS equation of the variable at index.

+
Parameters
+ + + +
indexIndex of variable
dependenciesContainer containing list of dependency strings for variable at index Hint: {"variable", "grad(variable)", "hess(variable)"}
+
+
+ +
+

◆ set_allowed_to_nucleate()

@@ -232,7 +404,7 @@

-

Set the dependencies for the gradient term of the LHS equation of the variable at index.

+

Add dependencies for the gradient term of the LHS equation of the variable at index.

Parameters
@@ -269,7 +441,7 @@

-

Set the dependencies for the gradient term of the RHS equation of the variable at index.

+

Add dependencies for the gradient term of the RHS equation of the variable at index.

Parameters

indexIndex of variable
@@ -306,7 +478,7 @@

-

Set the dependencies for the value term of the LHS equation of the variable at index.

+

Add dependencies for the value term of the LHS equation of the variable at index.

Parameters

indexIndex of variable
@@ -343,7 +515,7 @@

-

Set the dependencies for the value term of the RHS equation of the variable at index.

+

Add dependencies for the value term of the RHS equation of the variable at index.

Parameters

indexIndex of variable
diff --git a/doxygen/classvariableAttributeLoader.js b/doxygen/classvariableAttributeLoader.js index 897b7464..55c5f5ff 100644 --- a/doxygen/classvariableAttributeLoader.js +++ b/doxygen/classvariableAttributeLoader.js @@ -3,6 +3,10 @@ var classvariableAttributeLoader = [ "variableAttributeLoader", "classvariableAttributeLoader.html#a09dac7f1e37bf1057082dfb147fd03e0", null ], [ "get_pp_attributes", "classvariableAttributeLoader.html#a2f8f23d443aeae0f7d10a1fb9888fded", null ], [ "get_var_attributes", "classvariableAttributeLoader.html#a195f8ab6aca6f9d3490d8d9c7273cec4", null ], + [ "insert_dependencies_gradient_term_LHS", "classvariableAttributeLoader.html#a7ce6993b306fe93b9084f2c1aa3a8cd6", null ], + [ "insert_dependencies_gradient_term_RHS", "classvariableAttributeLoader.html#ac2419731964cdad99e238d0f81018381", null ], + [ "insert_dependencies_value_term_LHS", "classvariableAttributeLoader.html#a8dd08e890ca57f7433106796f20d4bcd", null ], + [ "insert_dependencies_value_term_RHS", "classvariableAttributeLoader.html#a8140101944800e99e2ceb73ff97b809d", null ], [ "loadPostProcessorVariableAttributes", "classvariableAttributeLoader.html#a929cea4029a8a58111c481b5e8fe911a", null ], [ "loadVariableAttributes", "classvariableAttributeLoader.html#a3715ca75c580a480ba963f4e299b647a", null ], [ "set_allowed_to_nucleate", "classvariableAttributeLoader.html#aebaa8c5c2c9af1f9276d2ca7950731eb", null ], diff --git a/doxygen/functions.html b/doxygen/functions.html index c900da3d..f7b91e1d 100644 --- a/doxygen/functions.html +++ b/doxygen/functions.html @@ -299,6 +299,18 @@

- i -

diff --git a/doxygen/functions_func.html b/doxygen/functions_func.html index 1dc4ed90..4a040fa0 100644 --- a/doxygen/functions_func.html +++ b/doxygen/functions_func.html @@ -278,6 +278,18 @@

- i -

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110  set_dependencies_gradient_term_LHS(const unsigned int &index,
111  const std::string &dependencies) const;
112 
-
120  void
-
121  set_need_value_nucleation(const unsigned int &index, const bool &flag) const;
-
122 
-
129  void
-
130  set_allowed_to_nucleate(const unsigned int &index, const bool &flag) const;
-
131 
-
140  void
-
141  set_output_integral(const unsigned int &index, const bool &flag) const;
-
142 
-
146  AttributesList
-
147  get_var_attributes() const;
-
148 
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152  AttributesList
-
153  get_pp_attributes() const;
-
154 
-
158  AttributesList var_attributes;
-
159 
-
163  AttributesList pp_attributes;
+
121  template <typename Iterable>
+
122  void
+
123  insert_dependencies_value_term_RHS(const unsigned int &index,
+
124  const Iterable &dependencies);
+
125 
+
134  template <typename Iterable>
+
135  void
+
136  insert_dependencies_gradient_term_RHS(const unsigned int &index,
+
137  const Iterable &dependencies);
+
138 
+
147  template <typename Iterable>
+
148  void
+
149  insert_dependencies_value_term_LHS(const unsigned int &index,
+
150  const Iterable &dependencies) const;
+
151 
+
160  template <typename Iterable>
+
161  void
+
162  insert_dependencies_gradient_term_LHS(const unsigned int &index,
+
163  const Iterable &dependencies) const;
164 
-
169  AttributesList *relevant_attributes = nullptr;
-
170 
-
171 private:
-
176  void
-
177  validate_attributes();
-
178 
-
183  static void
-
184  validate_variable_name(const std::string &name,
-
185  const std::set<std::string> &forbidden_names,
-
186  const std::string &context,
-
187  unsigned int index);
-
188 
-
192  static void
-
193  populate_dependencies(
-
194  const std::set<std::pair<std::string, std::string>> &reg_delimiters,
-
195  const std::string &variable_name,
-
196  unsigned int index,
-
197  std::set<std::string> &reg_possible_deps,
-
198  std::map<uint, std::set<std::string>> &change_possible_deps);
-
199 
-
203  static void
-
204  validate_dependencies(
-
205  const std::set<std::string> &dependencies,
-
206  const std::string &context,
-
207  unsigned int index,
-
208  const std::string &variable_name,
-
209  const std::set<std::string> &reg_possible_deps,
-
210  const std::map<uint, std::set<std::string>> &change_possible_deps);
+
172  void
+
173  set_need_value_nucleation(const unsigned int &index, const bool &flag) const;
+
174 
+
181  void
+
182  set_allowed_to_nucleate(const unsigned int &index, const bool &flag) const;
+
183 
+
192  void
+
193  set_output_integral(const unsigned int &index, const bool &flag) const;
+
194 
+
198  [[nodiscard]] AttributesList
+
199  get_var_attributes() const;
+
200 
+
204  [[nodiscard]] AttributesList
+
205  get_pp_attributes() const;
+
206 
+
210  AttributesList var_attributes;
211 
-
215  static void
-
216  validate_postprocess_variable(const std::string &name,
-
217  const std::set<std::string> &name_list,
-
218  const std::set<std::string> &reg_possible_deps,
-
219  const variableAttributes &pp_variable,
-
220  unsigned int index);
-
221 
-
225  static std::string
-
226  strip_whitespace(const std::string &text);
-
227  // The above function should be moved to a 'utilities' module
-
228 };
-
229 
-
230 #endif
+
215  AttributesList pp_attributes;
+
216 
+
221  AttributesList *relevant_attributes = nullptr;
+
222 
+
223 private:
+
228  void
+
229  validate_attributes();
+
230 
+
235  static void
+
236  validate_variable_name(const std::string &name,
+
237  const std::set<std::string> &forbidden_names,
+
238  const std::string &context,
+
239  unsigned int index);
+
240 
+
244  static void
+
245  populate_dependencies(
+
246  const std::set<std::pair<std::string, std::string>> &reg_delimiters,
+
247  const std::string &variable_name,
+
248  unsigned int index,
+
249  std::set<std::string> &reg_possible_deps,
+
250  std::map<uint, std::set<std::string>> &change_possible_deps);
+
251 
+
255  static void
+
256  validate_dependencies(
+
257  const std::set<std::string> &dependencies,
+
258  const std::string &context,
+
259  unsigned int index,
+
260  const std::string &variable_name,
+
261  const std::set<std::string> &reg_possible_deps,
+
262  const std::map<uint, std::set<std::string>> &change_possible_deps);
+
263 
+
267  static void
+
268  validate_postprocess_variable(const std::string &name,
+
269  const std::set<std::string> &name_list,
+
270  const std::set<std::string> &reg_possible_deps,
+
271  const variableAttributes &pp_variable,
+
272  unsigned int index);
+
273 
+
277  static std::string
+
278  strip_whitespace(const std::string &text);
+
279  // The above function should be moved to a 'utilities' module
+
280 };
+
281 
+
282 #endif
Class to manage the variable attributes that the user specifies.
Definition: variableAttributeLoader.h:15
variableAttributeLoader()
Constructor. Executes the user-facing functions and constructs the variable attributes.
Definition: variableAttributeLoader.cc:7
void set_variable_type(const unsigned int &index, const fieldType &var_type) const
Set the field type of the variable at index to var_type where var_type can be SCALAR or VECTOR.
Definition: variableAttributeLoader.cc:71
@@ -202,18 +222,22 @@
void set_output_integral(const unsigned int &index, const bool &flag) const
(Postprocess only) Flag whether the postprocessing variable at index should have its domain integral ...
Definition: variableAttributeLoader.cc:99
AttributesList get_pp_attributes() const
getter function for postprocessing attributes list (copy).
Definition: variableAttributeLoader.cc:57
void loadVariableAttributes()
User-facing method where the variable attributes are set.
-
void set_dependencies_gradient_term_LHS(const unsigned int &index, const std::string &dependencies) const
Set the dependencies for the gradient term of the LHS equation of the variable at index.
Definition: variableAttributeLoader.cc:159
-
void set_dependencies_value_term_LHS(const unsigned int &index, const std::string &dependencies) const
Set the dependencies for the value term of the LHS equation of the variable at index.
Definition: variableAttributeLoader.cc:148
-
AttributesList var_attributes
The solutions variable attributes.
Definition: variableAttributeLoader.h:158
-
void set_dependencies_gradient_term_RHS(const unsigned int &index, const std::string &dependencies)
Set the dependencies for the gradient term of the RHS equation of the variable at index.
Definition: variableAttributeLoader.cc:127
+
void set_dependencies_gradient_term_LHS(const unsigned int &index, const std::string &dependencies) const
Add dependencies for the gradient term of the LHS equation of the variable at index.
Definition: variableAttributeLoader.cc:136
+
void set_dependencies_value_term_LHS(const unsigned int &index, const std::string &dependencies) const
Add dependencies for the value term of the LHS equation of the variable at index.
Definition: variableAttributeLoader.cc:126
+
void insert_dependencies_gradient_term_LHS(const unsigned int &index, const Iterable &dependencies) const
Insert dependencies for the gradient term of the LHS equation of the variable at index.
Definition: variableAttributeLoader.cc:196
+
void insert_dependencies_value_term_RHS(const unsigned int &index, const Iterable &dependencies)
Insert dependencies for the value term of the RHS equation of the variable at index.
Definition: variableAttributeLoader.cc:147
+
AttributesList var_attributes
The solutions variable attributes.
Definition: variableAttributeLoader.h:210
+
void insert_dependencies_value_term_LHS(const unsigned int &index, const Iterable &dependencies) const
Insert dependencies for the value term of the LHS equation of the variable at index.
Definition: variableAttributeLoader.cc:186
+
void set_dependencies_gradient_term_RHS(const unsigned int &index, const std::string &dependencies)
Add dependencies for the gradient term of the RHS equation of the variable at index.
Definition: variableAttributeLoader.cc:116
void set_variable_equation_type(const unsigned int &index, const PDEType &var_eq_type) const
Set the PDE type of the variable at index to var_eq_type where var_eq_typecan be EXPLICIT_TIME_DEPEND...
Definition: variableAttributeLoader.cc:78
void loadPostProcessorVariableAttributes()
User-facing method where the postprocessing variable attributes are set.
void set_need_value_nucleation(const unsigned int &index, const bool &flag) const
Flag whether the variable at index is needed to calculate the nucleation probability.
Definition: variableAttributeLoader.cc:85
-
AttributesList * relevant_attributes
Useful pointer for setting whether solution or postprocessiong variables are being loaded.
Definition: variableAttributeLoader.h:169
+
void insert_dependencies_gradient_term_RHS(const unsigned int &index, const Iterable &dependencies)
Insert dependencies for the gradient term of the RHS equation of the variable at index.
Definition: variableAttributeLoader.cc:166
+
AttributesList * relevant_attributes
Useful pointer for setting whether solution or postprocessiong variables are being loaded.
Definition: variableAttributeLoader.h:221
void set_allowed_to_nucleate(const unsigned int &index, const bool &flag) const
Flag whether the variable at index is can have a nucleation event.
Definition: variableAttributeLoader.cc:92
void set_variable_name(const unsigned int &index, const std::string &name) const
Set the name of the variable at index to name.
Definition: variableAttributeLoader.cc:64
-
AttributesList pp_attributes
The postprocessing variable attributes.
Definition: variableAttributeLoader.h:163
-
void set_dependencies_value_term_RHS(const unsigned int &index, const std::string &dependencies)
Set the dependencies for the value term of the RHS equation of the variable at index.
Definition: variableAttributeLoader.cc:107
+
AttributesList pp_attributes
The postprocessing variable attributes.
Definition: variableAttributeLoader.h:215
+
void set_dependencies_value_term_RHS(const unsigned int &index, const std::string &dependencies)
Add dependencies for the value term of the RHS equation of the variable at index.
Definition: variableAttributeLoader.cc:107
Structure to hold the variable attributes that will be passed to a setInputParameters object.
Definition: variableAttributes.h:20
indexIndex of variable