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Simply fine-tuning ETL #131

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chathasphere opened this issue May 4, 2022 · 0 comments
Open

Simply fine-tuning ETL #131

chathasphere opened this issue May 4, 2022 · 0 comments
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@chathasphere
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Instead of manipulating data during preprocessing to identify cases and controls, I think it would be a lot simpler to optionally supply a list of patient IDs and labels to retrieve.

In a Jupyter notebook (say), we could build a suitable cohort of cases and controls, and then select for only these IDs during chunk iteration. I think this could speed up ETL significantly.

@chathasphere chathasphere self-assigned this May 18, 2022
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