diff --git a/DESCRIPTION b/DESCRIPTION index 92cc93e..50f435e 100644 --- a/DESCRIPTION +++ b/DESCRIPTION @@ -11,6 +11,7 @@ Depends: tidyverse Imports: arrow, + caret, crew, crew.cluster, devtools, diff --git a/renv.lock b/renv.lock index dd0f3a6..4cc203c 100644 --- a/renv.lock +++ b/renv.lock @@ -122,6 +122,17 @@ ], "Hash": "e57f593112825c91949debb0da1d45d6" }, + "KernSmooth": { + "Package": "KernSmooth", + "Version": "2.23-24", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "R", + "stats" + ], + "Hash": "9f33a1ee37bbe8919eb2ec4b9f2473a5" + }, "MASS": { "Package": "MASS", "Version": "7.3-61", @@ -167,6 +178,18 @@ ], "Hash": "0776bf7526869e0286b0463cb72fb211" }, + "ModelMetrics": { + "Package": "ModelMetrics", + "Version": "1.2.2.2", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "R", + "Rcpp", + "data.table" + ], + "Hash": "40a55bd0b44719941d103291ac5e9d74" + }, "R.matlab": { "Package": "R.matlab", "Version": "3.7.0", @@ -316,6 +339,16 @@ ], "Hash": "c232938949fcd8126034419cc529333a" }, + "SQUAREM": { + "Package": "SQUAREM", + "Version": "2021.1", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "R" + ], + "Hash": "0cf10dab0d023d5b46a5a14387556891" + }, "SparseM": { "Package": "SparseM", "Version": "1.84", @@ -598,6 +631,32 @@ ], "Hash": "ac6cdb8552c61bd36b0e54d07cf2aab7" }, + "caret": { + "Package": "caret", + "Version": "6.0-94", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "ModelMetrics", + "R", + "e1071", + "foreach", + "ggplot2", + "grDevices", + "lattice", + "methods", + "nlme", + "pROC", + "plyr", + "recipes", + "reshape2", + "stats", + "stats4", + "utils", + "withr" + ], + "Hash": "528692344d5a174552e3bf7acdfbaebd" + }, "cellranger": { "Package": "cellranger", "Version": "1.1.0", @@ -656,6 +715,22 @@ ], "Hash": "3f038e5ac7f41d4ac41ce658c85e3042" }, + "clock": { + "Package": "clock", + "Version": "0.7.1", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "R", + "cli", + "cpp11", + "lifecycle", + "rlang", + "tzdb", + "vctrs" + ], + "Hash": "3dcaebd52554438d12989e5061e15de8" + }, "cluster": { "Package": "cluster", "Version": "2.1.6", @@ -948,6 +1023,19 @@ ], "Hash": "ea5bc8b4a6a01e4f12d98b58329930bb" }, + "diagram": { + "Package": "diagram", + "Version": "1.6.5", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "R", + "graphics", + "shape", + "stats" + ], + "Hash": "c7f527c59edc72c4bce63519b8d38752" + }, "diffobj": { "Package": "diffobj", "Version": "0.3.5", @@ -1256,6 +1344,19 @@ ], "Hash": "1a0a9a3d5083d0d573c4214576f1e690" }, + "foreach": { + "Package": "foreach", + "Version": "1.5.2", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "R", + "codetools", + "iterators", + "utils" + ], + "Hash": "618609b42c9406731ead03adf5379850" + }, "freesurferformats": { "Package": "freesurferformats", "Version": "0.1.18", @@ -1687,6 +1788,13 @@ ], "Hash": "d6db1667059d027da730decdc214b959" }, + "gower": { + "Package": "gower", + "Version": "1.0.1", + "Source": "Repository", + "Repository": "CRAN", + "Hash": "7a0051eef852c301b5efe2f7913dd45f" + }, "gridExtra": { "Package": "gridExtra", "Version": "2.3", @@ -1729,6 +1837,21 @@ ], "Hash": "e18861963cbc65a27736e02b3cd3c4a0" }, + "hardhat": { + "Package": "hardhat", + "Version": "1.4.0", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "R", + "cli", + "glue", + "rlang", + "tibble", + "vctrs" + ], + "Hash": "e7aabf81944f6c6cbbcec1f85827a279" + }, "haven": { "Package": "haven", "Version": "2.5.4", @@ -1922,6 +2045,22 @@ "Repository": "CRAN", "Hash": "6154ec2223172bce8162d4153cda21f7" }, + "ipred": { + "Package": "ipred", + "Version": "0.9-15", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "MASS", + "R", + "class", + "nnet", + "prodlim", + "rpart", + "survival" + ], + "Hash": "3c3e02183ef7b9225213b531d0ce43f5" + }, "isoband": { "Package": "isoband", "Version": "0.2.7", @@ -1933,6 +2072,17 @@ ], "Hash": "0080607b4a1a7b28979aecef976d8bc2" }, + "iterators": { + "Package": "iterators", + "Version": "1.0.14", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "R", + "utils" + ], + "Hash": "8954069286b4b2b0d023d1b288dce978" + }, "jquerylib": { "Package": "jquerylib", "Version": "0.1.4", @@ -2006,6 +2156,27 @@ ], "Hash": "cc5ac1ba4c238c7ca9fa6a87ca11a7e2" }, + "lava": { + "Package": "lava", + "Version": "1.8.0", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "R", + "SQUAREM", + "cli", + "future.apply", + "grDevices", + "graphics", + "methods", + "numDeriv", + "progressr", + "stats", + "survival", + "utils" + ], + "Hash": "579303ca1e817d94cea694b319803380" + }, "libcoin": { "Package": "libcoin", "Version": "1.0-10", @@ -2431,6 +2602,19 @@ ], "Hash": "d69e33af0b2db93a1f3dcc4a5888379b" }, + "pROC": { + "Package": "pROC", + "Version": "1.18.5", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "R", + "Rcpp", + "methods", + "plyr" + ], + "Hash": "82d32ebd548c6a4e7de73bab96411b3b" + }, "parallelly": { "Package": "parallelly", "Version": "1.38.0", @@ -2704,6 +2888,25 @@ ], "Hash": "0c90a7d71988856bad2a2a45dd871bb9" }, + "prodlim": { + "Package": "prodlim", + "Version": "2024.06.25", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "KernSmooth", + "R", + "Rcpp", + "data.table", + "diagram", + "grDevices", + "graphics", + "lava", + "stats", + "survival" + ], + "Hash": "d1e73a231e9442c29e21876f303382fc" + }, "profvis": { "Package": "profvis", "Version": "0.3.8", @@ -3005,6 +3208,38 @@ ], "Hash": "8cf9c239b96df1bbb133b74aef77ad0a" }, + "recipes": { + "Package": "recipes", + "Version": "1.1.0", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "Matrix", + "R", + "cli", + "clock", + "dplyr", + "generics", + "glue", + "gower", + "hardhat", + "ipred", + "lifecycle", + "lubridate", + "magrittr", + "purrr", + "rlang", + "stats", + "tibble", + "tidyr", + "tidyselect", + "timeDate", + "utils", + "vctrs", + "withr" + ], + "Hash": "fc6672e55fcd1b5c461a3529ff6b1b08" + }, "rematch": { "Package": "rematch", "Version": "2.0.0", @@ -3084,6 +3319,19 @@ ], "Hash": "1425f91b4d5d9a8f25352c44a3d914ed" }, + "reshape2": { + "Package": "reshape2", + "Version": "1.4.4", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "R", + "Rcpp", + "plyr", + "stringr" + ], + "Hash": "bb5996d0bd962d214a11140d77589917" + }, "reticulate": { "Package": "reticulate", "Version": "1.38.0", @@ -3179,6 +3427,19 @@ ], "Hash": "6ee25f9054a70f44d615300ed531ba8d" }, + "rpart": { + "Package": "rpart", + "Version": "4.1.23", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "R", + "grDevices", + "graphics", + "stats" + ], + "Hash": "b3d390424f41d04174cccf84d49676c2" + }, "rprojroot": { "Package": "rprojroot", "Version": "2.0.4", @@ -3364,6 +3625,19 @@ ], "Hash": "3f9796a8d0a0e8c6eb49a4b029359d1f" }, + "shape": { + "Package": "shape", + "Version": "1.4.6.1", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "R", + "grDevices", + "graphics", + "stats" + ], + "Hash": "5c47e84dc0a3ca761ae1d307889e796d" + }, "shiny": { "Package": "shiny", "Version": "1.8.1.1", @@ -3726,6 +4000,20 @@ ], "Hash": "c328568cd14ea89a83bd4ca7f54ae07e" }, + "timeDate": { + "Package": "timeDate", + "Version": "4041.110", + "Source": "Repository", + "Repository": "CRAN", + "Requirements": [ + "R", + "graphics", + "methods", + "stats", + "utils" + ], + "Hash": "c5e48e8ac24d4472ddb122bcdeb011ad" + }, "timechange": { "Package": "timechange", "Version": "0.3.0",