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individual.py
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individual.py
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# -*- coding: utf-8 -*-
# Owlready2
# Copyright (C) 2013-2019 Jean-Baptiste LAMY
# LIMICS (Laboratoire d'informatique médicale et d'ingénierie des connaissances en santé), UMR_S 1142
# University Paris 13, Sorbonne paris-Cité, Bobigny, France
# This program is free software: you can redistribute it and/or modify
# it under the terms of the GNU Lesser General Public License as published by
# the Free Software Foundation, either version 3 of the License, or
# (at your option) any later version.
# This program is distributed in the hope that it will be useful,
# but WITHOUT ANY WARRANTY; without even the implied warranty of
# MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the
# GNU Lesser General Public License for more details.
# You should have received a copy of the GNU Lesser General Public License
# along with this program. If not, see <http://www.gnu.org/licenses/>.
import owlready2
from owlready2.namespace import *
from owlready2.namespace import _cache_entity
from owlready2.entity import *
from owlready2.entity import _inherited_property_value_restrictions
class _EquivalentToList(CallbackList):
__slots__ = ["_indirect"]
def __init__(self, l, obj, callback):
CallbackList.__init__(self, l, obj, callback)
self._indirect = None
def _build_indirect(self):
n = self._obj.namespace
self._indirect = list({
n.ontology._to_python(o)
for o in n.world._get_obj_triples_transitive_sym(self._obj.storid, owl_equivalentindividual)
if o != self._obj.storid
})
def indirect(self):
if self._indirect is None: self._build_indirect()
return self._indirect
def self_and_indirect_equivalent(self):
yield self._obj
if self._indirect is None: self._build_indirect()
yield from self._indirect
class Thing(metaclass = ThingClass):
namespace = owl
def get_name(self): return self._name
def set_name(self, name):
self._name = name
self.namespace.world._refactor(self.storid, "%s%s" % (self.namespace.base_iri, name))
name = property(get_name, set_name)
def get_iri(self):
if self.storid < 0: return ""
return "%s%s" % (self.namespace.base_iri, self._name)
def set_iri(self, new_iri):
splitted = new_iri.rsplit("#", 1)
if len(splitted) == 2:
self.namespace = self.namespace.ontology.get_namespace("%s#" % splitted[0])
else:
splitted = new_iri.rsplit("/", 1)
self.namespace = self.namespace.ontology.get_namespace("%s/" % splitted[0])
self._name = splitted[1]
self.namespace.world._refactor(self.storid, new_iri)
iri = property(get_iri, set_iri)
def __new__(Class, name = None, namespace = None, **kargs):
if name:
if isinstance(name, Thing):
namespace = name.namespace
name = name.name
else:
namespace = namespace or (CURRENT_NAMESPACES.get() and CURRENT_NAMESPACES.get()[-1]) or Class.namespace
if LOADING or (name == ""):
already_existing = None
else:
already_existing = namespace.world["%s%s" % (namespace.base_iri, name)]
if not already_existing is None:
if not isinstance(already_existing, Class):
if isinstance(Class, FusionClass): Classes = Class.__bases__
else: Classes = (Class,)
for C in Classes:
if not C in already_existing.is_a:
already_existing.is_a._append(C)
if not LOADING:
already_existing.namespace.ontology._add_obj_triple_spo(already_existing.storid, rdf_type, C.storid)
bases = ThingClass._find_base_classes(already_existing.is_a)
if len(bases) == 1:
already_existing.__class__ = bases[0]
else:
already_existing.__class__ = FusionClass._get_fusion_class(bases)
if not LOADING:
for attr, value in kargs.items(): setattr(already_existing, attr, value)
return already_existing
#_cache_entity(entity)
#return object.__new__(Class)
#print(namespace, kargs)
return _cache_entity(object.__new__(Class))
def __init__(self, name = None, namespace = None, **kargs):
self.namespace = namespace or (CURRENT_NAMESPACES.get() and CURRENT_NAMESPACES.get()[-1]) or self.__class__.namespace
if isinstance(name, int):
is_new = True
iri = ""
self._name = ""
elif name:
is_new = not "storid" in self.__dict__
iri = "%s%s" % (self.namespace.base_iri, name)
self._name = name
else:
is_new = True
iri = self.namespace.world._new_numbered_iri("%s%s" % (self.namespace.base_iri, self.generate_default_name()))
self._name = iri[len(self.namespace.base_iri):]
if is_new:
self.__dict__["_equivalent_to"] = None
if isinstance(name, int): self.storid = name or self.namespace.world.graph.new_blank_node()
else: self.storid = self.namespace.world._abbreviate(iri)
self.namespace.world._entities[self.storid] = self
if isinstance(self.__class__, FusionClass):
self.__dict__["is_a"] = CallbackList(self.__class__.__bases__, self, Thing._instance_is_a_changed)
else:
self.__dict__["is_a"] = CallbackList([self.__class__], self, Thing._instance_is_a_changed)
if not LOADING:
if self.storid > 0: self.namespace.ontology._add_obj_triple_spo(self.storid, rdf_type, owl_named_individual)
for parent in self.is_a:
self.namespace.ontology._add_obj_triple_spo(self.storid, rdf_type, parent.storid)
for attr, value in kargs.items(): setattr(self, attr, value)
def generate_default_name(self): return self.__class__.name.lower()
def _get_is_instance_of(self): return self.is_a
def _set_is_instance_of(self, v): self.is_a = v
is_instance_of = property(_get_is_instance_of, _set_is_instance_of)
def _instance_is_a_changed(self, old):
new = set(self.is_a)
old = set(old)
for base in old - new:
if not LOADING: self.namespace.ontology._del_obj_triple_spo(self.storid, rdf_type, base.storid)
if isinstance(base, Construct): base._set_ontology(None)
bases = ThingClass._find_base_classes(self.is_a)
if len(bases) == 1:
self.__class__ = bases[0]
elif bases:
self.__class__ = FusionClass._get_fusion_class(bases)
else:
self.__class__ = Thing
list.insert(self.is_a, 0, Thing)
for base in new - old:
if isinstance(base, Construct): base = base._set_ontology_copy_if_needed(self.namespace.ontology, self.is_a)
if not LOADING: self.namespace.ontology._add_obj_triple_spo(self.storid, rdf_type, base.storid)
#def __attrs__(self): # Not Python standard, but used by EditObj
def get_equivalent_to(self):
if self._equivalent_to is None:
self._equivalent_to = _EquivalentToList(
[self.namespace.world._to_python(o, default_to_none = True)
for o in self.namespace.world._get_obj_triples_sp_o(self.storid, owl_equivalentindividual)
], self, Thing._instance_equivalent_to_changed)
return self._equivalent_to
def set_equivalent_to(self, value): self.equivalent_to.reinit(value)
# Cannot use property because it name-clashes with the Class similar property
#equivalent_to = property(get_equivalent_to, set_equivalent_to)
def _instance_equivalent_to_changed(self, old):
new = frozenset(self._equivalent_to)
old = frozenset(old)
for x in old - new:
self.namespace.ontology._del_obj_triple_spo(self.storid, owl_equivalentindividual, x.storid)
if isinstance(x, Construct): x._set_ontology(None)
else: # Invalidate it
if x.equivalent_to._indirect:
for x2 in x.equivalent_to._indirect: x2._equivalent_to._indirect = None
x._equivalent_to._indirect = None
for x in new - old:
self.namespace.ontology._add_obj_triple_spo(self.storid, owl_equivalentindividual, x.storid)
if isinstance(x, Construct): x = x._set_ontology_copy_if_needed(self.namespace.ontology, self._equivalent_to)
else: # Invalidate it
if x.equivalent_to._indirect:
for x2 in x.equivalent_to._indirect: x2._equivalent_to._indirect = None
x._equivalent_to._indirect = None
self._equivalent_to._indirect = None # Invalidate, because the addition / removal may add its own equivalent.
def differents(self):
for c, s, p, o in self.namespace.world._get_obj_triples_cspo_cspo(None, None, rdf_type, owl_alldifferent):
onto = self.namespace.world.graph.context_2_user_context(c)
list_bnode = self.namespace.world._get_obj_triple_sp_o(s, owl_distinctmembers)
storids = set(storid for storid, dropit in onto._parse_list_as_rdf(list_bnode))
if self.storid in storids: yield onto._parse_bnode(s)
def __getattr__(self, attr):
if attr.startswith("INDIRECT_"):
Prop = self.namespace.world._props.get(attr[9:])
if not Prop:
if attr == "INDIRECT_equivalent_to":
eq = self.equivalent_to
if eq._indirect is None: eq._build_indirect()
return eq._indirect
elif (attr == "INDIRECT_is_a") or (attr == "INDIRECT_is_instance_of"):
#return list({ ancestor for parent in self.is_a if isinstance(parent, ThingClass) for ancestor in parent.ancestors() })
return list({ ancestor for parent in self.is_a for ancestor in parent.ancestors(True, True) })
else: raise AttributeError("'%s' property is not defined." % attr)
if Prop.is_functional_for(self.__class__):
return Prop._get_indirect_value_for_individual(self)
else:
return list(Prop._get_indirect_values_for_individual(self))
elif attr.startswith("INVERSE_"):
Prop = self.namespace.world._props.get(attr[8:])
if Prop.inverse:
return getattr(self, Prop.inverse.python_name)
else:
if issubclass_python(Prop, InverseFunctionalProperty): self.__dict__[attr] = r = Prop._get_inverse_value_for_individual (self)
else: self.__dict__[attr] = r = Prop._get_inverse_values_for_individual(self)
return r
else:
Prop = self.namespace.world._props.get(attr)
if not Prop:
if attr == "equivalent_to": return self.get_equivalent_to() # Needed
raise AttributeError("'%s' property is not defined." % attr)
if Prop.is_functional_for(self.__class__): self.__dict__[attr] = r = Prop._get_value_for_individual (self)
else: self.__dict__[attr] = r = Prop._get_values_for_individual(self)
return r
def __setattr__(self, attr, value):
if attr in SPECIAL_ATTRS:
if attr == "is_a": self.is_a.reinit(value)
elif attr == "equivalent_to": self.set_equivalent_to(value) # Needed
else: super().__setattr__(attr, value)
else:
Prop = self.namespace.world._props.get(attr)
if Prop:
if Prop.is_functional_for(self.__class__):
if Prop._owl_type == owl_object_property:
old_value = self.__dict__.get(attr, None)
#if Prop.inverse_property and (not old_value is None):
# old_value.__dict__.pop(Prop.inverse_property.python_name, None) # Remove => force reloading; XXX optimizable
# self.namespace.ontology._del_obj_triple_spo(old_value.storid, Prop.inverse_property.storid, self.storid) # Also remove inverse
if not old_value is None:
if Prop.inverse_property:
old_value.__dict__.pop(Prop.inverse_property.python_name, None) # Remove => force reloading; XXX optimizable
self.namespace.ontology._del_obj_triple_spo(old_value.storid, Prop.inverse_property.storid, self.storid) # Also remove inverse
else:
old_value.__dict__.pop("INVERSE_%s" % Prop.python_name, None) # Remove => force reloading; XXX optimizable
super().__setattr__(attr, value)
if value is None:
self.namespace.ontology._del_obj_triple_spo(self.storid, Prop.storid, None)
else:
self.namespace.ontology._set_obj_triple_spo(self.storid, Prop.storid, value.storid)
if Prop.inverse_property: value.__dict__.pop(Prop.inverse_property.python_name, None) # Remove => force reloading; XXX optimizable
elif Prop._owl_type == owl_data_property:
old_value = self.__dict__.get(attr, None)
super().__setattr__(attr, value)
if value is None:
self.namespace.ontology._del_data_triple_spod(self.storid, Prop.storid, None, None)
else:
self.namespace.ontology._set_data_triple_spod(self.storid, Prop.storid, *self.namespace.ontology._to_rdf(value))
else:
if not isinstance(value, list):
if isinstance(Prop, AnnotationPropertyClass):
if value is None: value = []
else: value = [value]
else:
raise ValueError("Property '%s' is not functional, cannot assign directly (use .append() or assign a list)." % attr)
getattr(self, attr).reinit(value)
elif attr.startswith("INVERSE_"):
Prop = self.namespace.world._props.get(attr[8:])
if Prop:
if Prop.inverse: setattr(self, Prop.inverse.python_name, value)
else:
if issubclass_python(Prop, InverseFunctionalProperty):
old_value = self.__dict__.get(attr, None)
if not old_value is None:
if Prop.is_functional_for(old_value): setattr(old_value, Prop.python_name, None)
else: getattr(old_value, Prop.python_name).remove(self)
if not value is None:
if Prop.is_functional_for(value): setattr(value, Prop.python_name, self)
else: getattr(value, Prop.python_name).append(self)
else:
if not isinstance(value, list): raise ValueError("Property '%s' is not inverse functional, cannot assign directly (use .append() or assign a list)." % attr)
getattr(self, attr).reinit(value)
else:
raise ValueError("Property '%s' do not exist, cannot use its INVERSE." % attr[8:])
else: super().__setattr__(attr, value)
def _get_instance_possible_relations(self, ignore_domainless_properties = False):
for Prop in self.namespace.world._reasoning_props.values():
all_domains = set(Prop.domains_indirect())
if ignore_domainless_properties and (not all_domains):
for restrict in _inherited_property_value_restrictions(self, Prop, set()):
yield Prop
break
else:
for domain in all_domains:
if not domain._satisfied_by(self): break
else:
yield Prop
def get_properties(self):
l = set()
for storid in self.namespace.world._get_triples_s_p(self.storid):
Prop = self.namespace.world._get_by_storid(storid)
if not Prop is None: # None is is-a
l.add(Prop)
for storid in self.namespace.world._get_obj_triples_o_p(self.storid):
Prop = self.namespace.world._get_by_storid(storid)
if not Prop is None: # None is is-a
if Prop._inverse_property:
l.add(Prop._inverse_property)
return l
def INDIRECT_get_properties(self):
l = self.get_properties()
l.update(self.__class__.INDIRECT_get_class_properties())
return l
def __dir__(self):
return set(object.__dir__(self)) | { Prop.python_name for Prop in self.get_properties() }
def get_inverse_properties(self):
for s,p,o in self.namespace.world._get_obj_triples_spo_spo(None, None, self.storid):
Prop = self.namespace.world._get_by_storid(p)
if not Prop is None: # None is is-a
subject = self.namespace.world._get_by_storid(s)
yield subject, Prop
class Nothing(Thing): pass
class FusionClass(ThingClass):
ontology = anonymous
_CACHES = {}
_FUSION_CLASSES = {}
def __repr__(self): return "<FusionClass %s>" % ", ".join(repr(c) for c in self.__bases__)
@staticmethod
def _get_fusion_class(Classes0):
key = frozenset(Classes0)
Class = FusionClass._CACHES.get(key)
if Class: return Class
Classes = _keep_most_specific(Classes0, consider_equivalence = False)
try:
fusion_class = FusionClass._create_fusion_class(key, Classes)
except: # Too complex hierarchy => do not consider equivalent classes
Classes = _keep_most_specific(Classes0, consider_equivalence = True)
fusion_class = FusionClass._create_fusion_class(key, Classes)
return fusion_class
@staticmethod
def _create_fusion_class(key, Classes):
if len(Classes) == 1:
FusionClass._CACHES[key] = Class = tuple(Classes)[0]
return Class
Classes = tuple(sorted(Classes, key = lambda Class: Class.__name__))
if Classes in FusionClass._FUSION_CLASSES: return FusionClass._FUSION_CLASSES[Classes]
name = "_AND_".join(Class.__name__ for Class in Classes)
with anonymous: # Force triple insertion into anonymous
fusion_class = FusionClass(name, Classes, { "namespace" : anonymous })
FusionClass._FUSION_CLASSES[Classes] = FusionClass._CACHES[key] = fusion_class
return fusion_class