New Dseq implementation #439
Description
Finally almost there with the new Dseq implementation (e12bf12).
The new_dseq branch was the former master where I manually lifted in things from the Dseq4 branch, only changing what was absolutely necessary. There is now USER cloning natively supported by a method in the Dseq class.
Four tests currently fail for the assembly2 module:
tests/test_module_assembly2.py .......x....F.............F....FF.............
I commented in the code of test_module_assembly2.py Most of the tests is a failure of a sanity check, but the expected result is still produced.
@manulera Could you have a look at that?