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pyproject.toml
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pyproject.toml
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[build-system]
requires = ["setuptools", "setuptools_scm"]
build-backend = "setuptools.build_meta"
[project]
name = "TopoModelX"
dynamic = ["version"]
authors = [
{name = "PyT-Team Authors", email = "[email protected]"}
]
readme = "README.md"
description = "Topological Deep Learning"
license = {file = "LICENSE.txt"}
classifiers = [
"License :: OSI Approved :: MIT License",
"Development Status :: 4 - Beta",
"Intended Audience :: Science/Research",
"Topic :: Scientific/Engineering",
"Topic :: Scientific/Engineering :: Mathematics",
"Topic :: Scientific/Engineering :: Artificial Intelligence",
"Natural Language :: English",
"Programming Language :: Python :: 3",
"Programming Language :: Python :: 3.10",
"Programming Language :: Python :: 3.11"
]
requires-python = ">= 3.10"
dependencies=[
"tqdm",
"numpy<2",
"scipy",
"requests",
"scikit-learn",
"matplotlib",
"networkx",
"gudhi",
"pandas",
"pyg-nightly",
"toponetx",
]
[project.optional-dependencies]
doc = [
"hypernetx",
"jupyter",
"nbsphinx",
"nbsphinx_link",
"numpydoc",
"sphinx",
"sphinx-copybutton",
"sphinx_gallery",
"pydata-sphinx-theme"
]
lint = [
"pre-commit",
"ruff"
]
test = [
"pytest",
"pytest-cov",
"coverage",
"jupyter",
"mypy",
"pytest-xdist",
"pytest-split"
]
dev = ["TopoModelX[test, lint]"]
all = ["TopoModelX[dev, doc]"]
[project.urls]
documentation = "https://pyt-team.github.io/TopoModelX"
source = "https://github.com/pyt-team/TopoModelX"
issues = "https://github.com/pyt-team/TopoModelX/issues"
[tool.ruff]
target-version = "py310"
extend-include = ["*.ipynb"]
[tool.ruff.format]
docstring-code-format = true
[tool.ruff.lint]
select = [
"F", # pyflakes errors
"E", # code style
"W", # warnings
"I", # import order
"UP", # pyupgrade rules
"B", # bugbear rules
"PIE", # pie rules
"Q", # quote rules
"RET", # return rules
"SIM", # code simplifications
"NPY", # numpy rules
"PERF", # performance rules
"RUF", # miscellaneous rules
]
ignore = ["E501"] # line too long
[tool.ruff.lint.pydocstyle]
convention = "numpy"
[tool.ruff.lint.per-file-ignores]
"__init__.py" = ["F403"]
[tool.setuptools.packages.find]
include = ["topomodelx"]
[tool.setuptools_scm]
local_scheme = "no-local-version"
version_file = "topomodelx/_version.py"
[tool.mypy]
warn_redundant_casts = true
warn_unused_ignores = true
show_error_codes = true
disable_error_code = ["import-untyped"]
plugins = "numpy.typing.mypy_plugin"
[tool.pytest.ini_options]
minversion = "7.0"
addopts = ["-ra", "--showlocals", "--strict-markers", "--strict-config"]
xfail_strict = true
filterwarnings = [
"error",
"ignore::scipy.sparse._base.SparseEfficiencyWarning",
"ignore:Sparse CSR tensor support is in beta state:UserWarning",
]
log_cli_level = "info"
testpaths = ["test"]
[tool.numpydoc_validation]
checks = [
"all",
"GL01",
"ES01",
"EX01",
"SA01"
]
exclude = [
'\.undocumented_method$',
'\.__init__$',
]