From 41afb0698ba9a2728c4088d9ac9f8917c5a6e4d4 Mon Sep 17 00:00:00 2001 From: WackerO Date: Tue, 30 Apr 2024 08:40:14 +0200 Subject: [PATCH] fixed multiqc paths in config --- conf/test_star_rsem.config | 2 +- conf/test_star_salmon.config | 2 +- 2 files changed, 2 insertions(+), 2 deletions(-) diff --git a/conf/test_star_rsem.config b/conf/test_star_rsem.config index 840a5191..2139133b 100755 --- a/conf/test_star_rsem.config +++ b/conf/test_star_rsem.config @@ -23,7 +23,7 @@ params { //report_options = 'https://raw.githubusercontent.com/qbic-pipelines/rnadeseq/dev/testdata/report_options.yml' project_summary = 'https://raw.githubusercontent.com/qbic-pipelines/rnadeseq/dev/testdata/summary.tsv' software_versions = 'https://raw.githubusercontent.com/qbic-pipelines/rnadeseq/dev/testdata/software_versions_rsem.yml' - multiqc = 'testdata/QDESQ/new_rsem_multiqc.zip' + multiqc = 'https://raw.githubusercontent.com/qbic-pipelines/rnadeseq/dev/testdata/QDESQ/new_rsem_multiqc.zip' input_type = 'rsem' run_pathway_analysis = true datasources = 'GO:CC,KEGG' diff --git a/conf/test_star_salmon.config b/conf/test_star_salmon.config index 708c532c..3fd41063 100755 --- a/conf/test_star_salmon.config +++ b/conf/test_star_salmon.config @@ -23,7 +23,7 @@ params { //report_options = 'https://raw.githubusercontent.com/qbic-pipelines/rnadeseq/dev/testdata/report_options.yml' project_summary = 'https://raw.githubusercontent.com/qbic-pipelines/rnadeseq/dev/testdata/summary.tsv' software_versions = 'https://raw.githubusercontent.com/qbic-pipelines/rnadeseq/dev/testdata/software_versions_salmon.yml' - multiqc = 'testdata/QDESQ/new_salmon_multiqc.zip' + multiqc = 'https://raw.githubusercontent.com/qbic-pipelines/rnadeseq/dev/testdata/QDESQ/new_salmon_multiqc.zip' input_type = 'salmon' run_pathway_analysis = true datasources = 'KEGG,REAC'