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[BUG]: Version of CUB not compatible with thrust #4170

Closed
2 tasks done
aabbas90 opened this issue Feb 14, 2024 · 2 comments
Closed
2 tasks done

[BUG]: Version of CUB not compatible with thrust #4170

aabbas90 opened this issue Feb 14, 2024 · 2 comments
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@rlratzel @naimnv
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bug Something isn't working

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@aabbas90
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aabbas90 commented Feb 14, 2024 •
edited
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Version

23.12

Which installation method(s) does this occur on?

Source

Describe the bug.

I setup conda environment with pre-existing CUDA 12.1 with the following command

conda env create -n cugraph --file conda/environments/all_cuda-120_arch-x86_64.yaml

Then building
./build.sh libcugraph pylibcugraph cugraph --skip_cpp_tests

catches a conflict between thrust and CUB version. Possibly thrust version is a bit old see raft_thrust_version.

Thanks.

Minimum reproducible example

Please see bug description.

Relevant log output

-- Found CUB: /home/ahabbas/projects/cugraph/cpp/build/_deps/cccl-src/cub/cub/cmake/cub-config.cmake (found suitable version "2.2.0.0", minimum required is "2.2.0.0") 
-- Found CCCL: /home/ahabbas/projects/cugraph/cpp/build/_deps/cccl-src/lib/cmake/cccl/cccl-config.cmake (found version "2.2.0.0") 
-- rapids-cmake [CCCL]: applied diff bug_fixes.diff to fix issue: 'CCCL installs header-search.cmake files in nondeterministic order and has a typo in checking target creation that leads to duplicates'
-- rapids-cmake [CCCL]: applied diff hide_kernels.diff to fix issue: 'Mark all cub and thrust kernels with hidden visibility [https://github.com/nvidia/cccl/pulls/443]'
-- rapids-cmake [CCCL]: applied diff revert_pr_211.diff to fix issue: 'thrust::copy introduced a change in behavior that causes failures with cudaErrorInvalidValue.'
-- CPM: Adding package [email protected] (f823d30d6b08a60383266db25821074dbdbe5822)
-- rapids-cmake [cuco]: applied diff hide_kernels.diff to fix issue: 'CUCO Mark all kernels with hidden visibility [https://github.com/NVIDIA/cuCollections/pull/422]'
CMake Error at /BS/ahmed_projects/work/software/miniforge_cug/envs/cugraph/lib/rapids/cmake/thrust/thrust-config.cmake:218 (message):
  The version of CUB found by CMake is not compatible with this release of
  Thrust.  CUB is now included in the CUDA Toolkit, so you no longer need to
  use your own checkout of CUB.  Pass IGNORE_CUB_VERSION_CHECK to
  thrust_create_target to ignore.  (CUB 2.2.0.0, Thrust 1.17.2.0).
Call Stack (most recent call first):
  /BS/ahmed_projects/work/software/miniforge_cug/envs/cugraph/lib/cmake/raft/raft-dependencies.cmake:30 (thrust_create_target)
  /BS/ahmed_projects/work/software/miniforge_cug/envs/cugraph/lib/cmake/raft/raft-config.cmake:83 (include)
  build/cmake/CPM_0.38.5.cmake:243 (find_package)
  build/cmake/CPM_0.38.5.cmake:303 (cpm_find_package)
  build/_deps/rapids-cmake-src/rapids-cmake/cpm/find.cmake:189 (CPMFindPackage)
  cmake/thirdparty/get_raft.cmake:41 (rapids_cpm_find)
  cmake/thirdparty/get_raft.cmake:68 (find_and_configure_raft)
  CMakeLists.txt:166 (include)

Environment details

<details><summary>Click here to see environment details</summary><pre>
     
     **git***
     commit 2ec94b310ae854678e3c39a687b6cf34bd702c1b (HEAD -> branch-23.12, origin/branch-23.12)
     Author: Ray Douglass <[email protected]>
     Date:   Wed Dec 6 09:58:26 2023 -0500
     
     Update Changelog [skip ci]
     **git submodules***
     
     ***OS Information***
     PRETTY_NAME="Debian GNU/Linux 11 (bullseye)"
     NAME="Debian GNU/Linux"
     VERSION_ID="11"
     VERSION="11 (bullseye)"
     VERSION_CODENAME=bullseye
     ID=debian
     HOME_URL="https://www.debian.org/"
     SUPPORT_URL="https://www.debian.org/support"
     BUG_REPORT_URL="https://bugs.debian.org/"
     Linux gpu22-a40-03 5.15.133.1.amd64-smp #1 SMP Mon Sep 25 10:55:11 CEST 2023 x86_64 GNU/Linux
     
     ***GPU Information***
     Wed Feb 14 14:06:51 2024
     +-----------------------------------------------------------------------------+
     | NVIDIA-SMI 525.105.17   Driver Version: 525.105.17   CUDA Version: 12.0     |
     |-------------------------------+----------------------+----------------------+
     | GPU  Name        Persistence-M| Bus-Id        Disp.A | Volatile Uncorr. ECC |
     | Fan  Temp  Perf  Pwr:Usage/Cap|         Memory-Usage | GPU-Util  Compute M. |
     |                               |                      |               MIG M. |
     |===============================+======================+======================|
     |   0  NVIDIA A40          On   | 00000000:CD:00.0 Off |                    0 |
     |  0%   20C    P8    14W / 300W |      0MiB / 46068MiB |      0%      Default |
     |                               |                      |                  N/A |
     +-------------------------------+----------------------+----------------------+
     
     +-----------------------------------------------------------------------------+
     | Processes:                                                                  |
     |  GPU   GI   CI        PID   Type   Process name                  GPU Memory |
     |        ID   ID                                                   Usage      |
     |=============================================================================|
     |  No running processes found                                                 |
     +-----------------------------------------------------------------------------+
     
     ***CPU***
     Architecture:                       x86_64
     CPU op-mode(s):                     32-bit, 64-bit
     Byte Order:                         Little Endian
     Address sizes:                      46 bits physical, 57 bits virtual
     CPU(s):                             144
     On-line CPU(s) list:                0-143
     Thread(s) per core:                 2
     Core(s) per socket:                 36
     Socket(s):                          2
     NUMA node(s):                       2
     Vendor ID:                          GenuineIntel
     CPU family:                         6
     Model:                              106
     Model name:                         Intel(R) Xeon(R) Platinum 8360Y CPU @ 2.40GHz
     Stepping:                           6
     CPU MHz:                            2400.000
     BogoMIPS:                           4800.00
     Virtualization:                     VT-x
     L1d cache:                          3.4 MiB
     L1i cache:                          2.3 MiB
     L2 cache:                           90 MiB
     L3 cache:                           108 MiB
     NUMA node0 CPU(s):                  0-35,72-107
     NUMA node1 CPU(s):                  36-71,108-143
     Vulnerability Gather data sampling: Mitigation; Microcode
     Vulnerability Itlb multihit:        Not affected
     Vulnerability L1tf:                 Not affected
     Vulnerability Mds:                  Not affected
     Vulnerability Meltdown:             Not affected
     Vulnerability Mmio stale data:      Mitigation; Clear CPU buffers; SMT vulnerable
     Vulnerability Retbleed:             Not affected
     Vulnerability Spec rstack overflow: Not affected
     Vulnerability Spec store bypass:    Mitigation; Speculative Store Bypass disabled via prctl and seccomp
     Vulnerability Spectre v1:           Mitigation; usercopy/swapgs barriers and __user pointer sanitization
     Vulnerability Spectre v2:           Mitigation; Enhanced IBRS, IBPB conditional, RSB filling, PBRSB-eIBRS SW sequence
     Vulnerability Srbds:                Not affected
     Vulnerability Tsx async abort:      Not affected
     Flags:                              fpu vme de pse tsc msr pae mce cx8 apic sep mtrr pge mca cmov pat pse36 clflush dts acpi mmx fxsr sse sse2 ss ht tm pbe syscall nx pdpe1gb rdtscp lm constant_tsc art arch_perfmon pebs bts rep_good nopl xtopology nonstop_tsc cpuid aperfmperf pni pclmulqdq dtes64 monitor ds_cpl vmx smx est tm2 ssse3 sdbg fma cx16 xtpr pdcm pcid dca sse4_1 sse4_2 x2apic movbe popcnt tsc_deadline_timer aes xsave avx f16c rdrand lahf_lm abm 3dnowprefetch cpuid_fault epb cat_l3 invpcid_single intel_ppin ssbd mba ibrs ibpb stibp ibrs_enhanced tpr_shadow vnmi flexpriority ept vpid ept_ad fsgsbase tsc_adjust bmi1 avx2 smep bmi2 erms invpcid cqm rdt_a avx512f avx512dq rdseed adx smap avx512ifma clflushopt clwb intel_pt avx512cd sha_ni avx512bw avx512vl xsaveopt xsavec xgetbv1 xsaves cqm_llc cqm_occup_llc cqm_mbm_total cqm_mbm_local split_lock_detect wbnoinvd dtherm ida arat pln pts hwp_epp avx512vbmi umip pku ospke avx512_vbmi2 gfni vaes vpclmulqdq avx512_vnni avx512_bitalg tme avx512_vpopcntdq la57 rdpid fsrm md_clear pconfig flush_l1d arch_capabilities
     
     ***CMake***
     /BS/ahmed_projects/work/software/miniforge_cug/envs/cugraph/bin/cmake
     cmake version 3.28.3
     
     CMake suite maintained and supported by Kitware (kitware.com/cmake).
     
     ***g++***
     /BS/ahmed_projects/work/software/miniforge_cug/envs/cugraph/bin/g++
     g++ (conda-forge gcc 11.4.0-5) 11.4.0
     Copyright (C) 2021 Free Software Foundation, Inc.
     This is free software; see the source for copying conditions.  There is NO
     warranty; not even for MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.
     
     
     ***nvcc***
     /BS/ahmed_projects/work/software/miniforge_cug/envs/cugraph/bin/nvcc
     nvcc: NVIDIA (R) Cuda compiler driver
     Copyright (c) 2005-2022 NVIDIA Corporation
     Built on Mon_Oct_24_19:12:58_PDT_2022
     Cuda compilation tools, release 12.0, V12.0.76
     Build cuda_12.0.r12.0/compiler.31968024_0
     
     ***Python***
     /BS/ahmed_projects/work/software/miniforge_cug/envs/cugraph/bin/python
     Python 3.10.13
     
     ***Environment Variables***
     PATH                            : /BS/ahmed_projects/work/software/miniforge_cug/envs/cugraph/bin:/home/ahabbas/software/gcc-9-build/bin:/usr/lib/cuda-12.1/bin:/home/ahabbas/software/cmake_326/bin:/home/ahabbas/software/gcc-9-build/bin:/usr/lib/cuda-12.1/bin:/BS/ahmed_projects/work/software/miniforge_cug/condabin:/home/ahabbas/software/cmake_326/bin:/usr/local/bin:/usr/bin:/bin:/usr/local/games:/usr/games:/home/ahabbas/software/gurobi912/linux64/bin:/home/ahabbas/.local/bin:/home/ahabbas/software/gurobi912/linux64/bin
     LD_LIBRARY_PATH                 : /home/ahabbas/software/gcc-9-build/lib64:/usr/lib/cuda-12.1//lib64:/home/ahabbas/software/gcc-9-build/lib64:/usr/lib/cuda-12.1//lib64::/home/ahabbas/software/gurobi912/linux64/lib:/home/ahabbas/software/gurobi912/linux64/lib
     NUMBAPRO_NVVM                   :
     NUMBAPRO_LIBDEVICE              :
     CONDA_PREFIX                    : /BS/ahmed_projects/work/software/miniforge_cug/envs/cugraph
     PYTHON_PATH                     :
     
     ***conda packages***
     /BS/ahmed_projects/work/software/miniforge_cug/condabin/conda
     # packages in environment at /BS/ahmed_projects/work/software/miniforge_cug/envs/cugraph:
     #
     # Name                    Version                   Build  Channel
     _libgcc_mutex             0.1                 conda_forge    conda-forge
     _openmp_mutex             4.5                       2_gnu    conda-forge
     _sysroot_linux-64_curr_repodata_hack 3                   h69a702a_13    conda-forge
     accessible-pygments       0.0.4              pyhd8ed1ab_0    conda-forge
     aiohttp                   3.9.3           py310h2372a71_0    conda-forge
     aiosignal                 1.3.1              pyhd8ed1ab_0    conda-forge
     alabaster                 0.7.16             pyhd8ed1ab_0    conda-forge
     anyio                     4.2.0              pyhd8ed1ab_0    conda-forge
     argon2-cffi               23.1.0             pyhd8ed1ab_0    conda-forge
     argon2-cffi-bindings      21.2.0          py310h2372a71_4    conda-forge
     arrow                     1.3.0              pyhd8ed1ab_0    conda-forge
     asttokens                 2.4.1              pyhd8ed1ab_0    conda-forge
     async-lru                 2.0.4              pyhd8ed1ab_0    conda-forge
     async-timeout             4.0.3              pyhd8ed1ab_0    conda-forge
     atk-1.0                   2.38.0               hd4edc92_1    conda-forge
     attrs                     23.2.0             pyh71513ae_0    conda-forge
     aws-c-auth                0.7.15               h70caa3e_0    conda-forge
     aws-c-cal                 0.6.9                h14ec70c_3    conda-forge
     aws-c-common              0.9.12               hd590300_0    conda-forge
     aws-c-compression         0.2.17               h572eabf_8    conda-forge
     aws-c-event-stream        0.4.1                h17cd1f3_5    conda-forge
     aws-c-http                0.8.0                hc6da83f_5    conda-forge
     aws-c-io                  0.14.3               h3c8c088_1    conda-forge
     aws-c-mqtt                0.10.1               h0ef3971_3    conda-forge
     aws-c-s3                  0.5.0                h1b46bed_2    conda-forge
     aws-c-sdkutils            0.1.14               h572eabf_0    conda-forge
     aws-checksums             0.1.17               h572eabf_7    conda-forge
     aws-crt-cpp               0.26.1               h33f84b2_9    conda-forge
     aws-sdk-cpp               1.11.242             h65f022c_0    conda-forge
     babel                     2.14.0             pyhd8ed1ab_0    conda-forge
     beautifulsoup4            4.12.3             pyha770c72_0    conda-forge
     binutils                  2.40                 hdd6e379_0    conda-forge
     binutils_impl_linux-64    2.40                 hf600244_0    conda-forge
     binutils_linux-64         2.40                 hbdbef99_2    conda-forge
     bleach                    6.1.0              pyhd8ed1ab_0    conda-forge
     bokeh                     3.3.4              pyhd8ed1ab_0    conda-forge
     breathe                   4.35.0             pyhd8ed1ab_1    conda-forge
     brotli                    1.1.0                hd590300_1    conda-forge
     brotli-bin                1.1.0                hd590300_1    conda-forge
     brotli-python             1.1.0           py310hc6cd4ac_1    conda-forge
     bzip2                     1.0.8                hd590300_5    conda-forge
     c-ares                    1.26.0               hd590300_0    conda-forge
     c-compiler                1.5.2                h0b41bf4_0    conda-forge
     ca-certificates           2024.2.2             hbcca054_0    conda-forge
     cached-property           1.5.2                hd8ed1ab_1    conda-forge
     cached_property           1.5.2              pyha770c72_1    conda-forge
     cachetools                5.3.2              pyhd8ed1ab_0    conda-forge
     cairo                     1.18.0               h3faef2a_0    conda-forge
     certifi                   2024.2.2           pyhd8ed1ab_0    conda-forge
     cffi                      1.16.0          py310h2fee648_0    conda-forge
     cfgv                      3.3.1              pyhd8ed1ab_0    conda-forge
     charset-normalizer        3.3.2              pyhd8ed1ab_0    conda-forge
     click                     8.1.7           unix_pyh707e725_0    conda-forge
     cloudpickle               3.0.0              pyhd8ed1ab_0    conda-forge
     cmake                     3.28.3               hcfe8598_0    conda-forge
     colorama                  0.4.6              pyhd8ed1ab_0    conda-forge
     comm                      0.2.1              pyhd8ed1ab_0    conda-forge
     commonmark                0.9.1                      py_0    conda-forge
     contourpy                 1.2.0           py310hd41b1e2_0    conda-forge
     coverage                  7.4.1           py310h2372a71_0    conda-forge
     cuda-cccl_linux-64        12.0.90              ha770c72_1    conda-forge
     cuda-cudart               12.0.107             hd3aeb46_8    conda-forge
     cuda-cudart-dev           12.0.107             hd3aeb46_8    conda-forge
     cuda-cudart-dev_linux-64  12.0.107             h59595ed_8    conda-forge
     cuda-cudart-static        12.0.107             hd3aeb46_8    conda-forge
     cuda-cudart-static_linux-64 12.0.107             h59595ed_8    conda-forge
     cuda-cudart_linux-64      12.0.107             h59595ed_8    conda-forge
     cuda-driver-dev_linux-64  12.0.107             h59595ed_8    conda-forge
     cuda-nvcc                 12.0.76             hba56722_12    conda-forge
     cuda-nvcc-dev_linux-64    12.0.76              ha770c72_1    conda-forge
     cuda-nvcc-impl            12.0.76              h59595ed_1    conda-forge
     cuda-nvcc-tools           12.0.76              h59595ed_1    conda-forge
     cuda-nvcc_linux-64        12.0.76             hba56722_12    conda-forge
     cuda-nvrtc                12.0.76              hd3aeb46_2    conda-forge
     cuda-profiler-api         12.0.76              ha770c72_0    conda-forge
     cuda-python               12.3.0          py310h9f9f131_2    conda-forge
     cuda-version              12.0                 hffde075_2    conda-forge
     cudf                      23.12.01        cuda12_py310_231208_g2ce46216b5_0    rapidsai
     cupy                      13.0.0          py310h7aad9d2_3    conda-forge
     cupy-core                 13.0.0          py310had4011e_3    conda-forge
     cxx-compiler              1.5.2                hf52228f_0    conda-forge
     cycler                    0.12.1             pyhd8ed1ab_0    conda-forge
     cython                    3.0.8           py310hc6cd4ac_0    conda-forge
     cytoolz                   0.12.3          py310h2372a71_0    conda-forge
     dask                      2023.11.0          pyhd8ed1ab_0    conda-forge
     dask-core                 2023.11.0          pyhd8ed1ab_0    conda-forge
     dask-cuda                 23.12.00        py310_231206_ge1638ae_0    rapidsai
     dask-cudf                 23.12.01        cuda12_py310_231208_g2ce46216b5_0    rapidsai
     debugpy                   1.8.1           py310hc6cd4ac_0    conda-forge
     decorator                 5.1.1              pyhd8ed1ab_0    conda-forge
     defusedxml                0.7.1              pyhd8ed1ab_0    conda-forge
     distlib                   0.3.8              pyhd8ed1ab_0    conda-forge
     distributed               2023.11.0          pyhd8ed1ab_0    conda-forge
     distro                    1.9.0              pyhd8ed1ab_0    conda-forge
     dlpack                    0.5                  h9c3ff4c_0    conda-forge
     docutils                  0.19            py310hff52083_1    conda-forge
     doxygen                   1.10.0               h661eb56_0    conda-forge
     entrypoints               0.4                pyhd8ed1ab_0    conda-forge
     exceptiongroup            1.2.0              pyhd8ed1ab_2    conda-forge
     execnet                   2.0.2              pyhd8ed1ab_0    conda-forge
     executing                 2.0.1              pyhd8ed1ab_0    conda-forge
     expat                     2.5.0                hcb278e6_1    conda-forge
     fastrlock                 0.8.2           py310hc6cd4ac_2    conda-forge
     filelock                  3.13.1             pyhd8ed1ab_0    conda-forge
     fmt                       9.1.0                h924138e_0    conda-forge
     font-ttf-dejavu-sans-mono 2.37                 hab24e00_0    conda-forge
     font-ttf-inconsolata      3.000                h77eed37_0    conda-forge
     font-ttf-source-code-pro  2.038                h77eed37_0    conda-forge
     font-ttf-ubuntu           0.83                 h77eed37_1    conda-forge
     fontconfig                2.14.2               h14ed4e7_0    conda-forge
     fonts-conda-ecosystem     1                             0    conda-forge
     fonts-conda-forge         1                             0    conda-forge
     fonttools                 4.48.1          py310h2372a71_0    conda-forge
     fqdn                      1.5.1              pyhd8ed1ab_0    conda-forge
     freetype                  2.12.1               h267a509_2    conda-forge
     fribidi                   1.0.10               h36c2ea0_0    conda-forge
     frozenlist                1.4.1           py310h2372a71_0    conda-forge
     fsspec                    2024.2.0           pyhca7485f_0    conda-forge
     future                    0.18.3             pyhd8ed1ab_0    conda-forge
     gcc                       11.4.0               h7baecda_2    conda-forge
     gcc_impl_linux-64         11.4.0               h7aa1c59_5    conda-forge
     gcc_linux-64              11.4.0               hfd045f2_2    conda-forge
     gdk-pixbuf                2.42.10              h829c605_4    conda-forge
     gettext                   0.21.1               h27087fc_0    conda-forge
     gflags                    2.2.2             he1b5a44_1004    conda-forge
     giflib                    5.2.1                h0b41bf4_3    conda-forge
     glog                      0.6.0                h6f12383_0    conda-forge
     gmock                     1.14.0               ha770c72_1    conda-forge
     graphite2                 1.3.13            h58526e2_1001    conda-forge
     graphviz                  9.0.0                h78e8752_1    conda-forge
     gtest                     1.14.0               h00ab1b0_1    conda-forge
     gtk2                      2.24.33              h7f000aa_3    conda-forge
     gts                       0.7.6                h977cf35_4    conda-forge
     gxx                       11.4.0               h7baecda_2    conda-forge
     gxx_impl_linux-64         11.4.0               h7aa1c59_5    conda-forge
     gxx_linux-64              11.4.0               hfc1ae95_2    conda-forge
     h11                       0.14.0             pyhd8ed1ab_0    conda-forge
     h2                        4.1.0              pyhd8ed1ab_0    conda-forge
     harfbuzz                  8.3.0                h3d44ed6_0    conda-forge
     hpack                     4.0.0              pyh9f0ad1d_0    conda-forge
     httpcore                  1.0.2              pyhd8ed1ab_0    conda-forge
     httpx                     0.26.0             pyhd8ed1ab_0    conda-forge
     hyperframe                6.0.1              pyhd8ed1ab_0    conda-forge
     icu                       73.2                 h59595ed_0    conda-forge
     identify                  2.5.34             pyhd8ed1ab_0    conda-forge
     idna                      3.6                pyhd8ed1ab_0    conda-forge
     imagesize                 1.4.1              pyhd8ed1ab_0    conda-forge
     importlib-metadata        7.0.1              pyha770c72_0    conda-forge
     importlib_metadata        7.0.1                hd8ed1ab_0    conda-forge
     importlib_resources       6.1.1              pyhd8ed1ab_0    conda-forge
     iniconfig                 2.0.0              pyhd8ed1ab_0    conda-forge
     ipykernel                 6.29.2             pyhd33586a_0    conda-forge
     ipython                   8.21.0             pyh707e725_0    conda-forge
     isoduration               20.11.0            pyhd8ed1ab_0    conda-forge
     jedi                      0.19.1             pyhd8ed1ab_0    conda-forge
     jinja2                    3.1.3              pyhd8ed1ab_0    conda-forge
     joblib                    1.3.2              pyhd8ed1ab_0    conda-forge
     json5                     0.9.14             pyhd8ed1ab_0    conda-forge
     jsonpointer               2.4             py310hff52083_3    conda-forge
     jsonschema                4.21.1             pyhd8ed1ab_0    conda-forge
     jsonschema-specifications 2023.12.1          pyhd8ed1ab_0    conda-forge
     jsonschema-with-format-nongpl 4.21.1             pyhd8ed1ab_0    conda-forge
     jupyter-lsp               2.2.2              pyhd8ed1ab_0    conda-forge
     jupyter_client            8.6.0              pyhd8ed1ab_0    conda-forge
     jupyter_core              5.7.1           py310hff52083_0    conda-forge
     jupyter_events            0.9.0              pyhd8ed1ab_0    conda-forge
     jupyter_server            2.12.5             pyhd8ed1ab_0    conda-forge
     jupyter_server_terminals  0.5.2              pyhd8ed1ab_0    conda-forge
     jupyterlab                4.1.1              pyhd8ed1ab_0    conda-forge
     jupyterlab_pygments       0.3.0              pyhd8ed1ab_1    conda-forge
     jupyterlab_server         2.25.2             pyhd8ed1ab_0    conda-forge
     kernel-headers_linux-64   3.10.0              h4a8ded7_13    conda-forge
     keyutils                  1.6.1                h166bdaf_0    conda-forge
     kiwisolver                1.4.5           py310hd41b1e2_1    conda-forge
     krb5                      1.21.2               h659d440_0    conda-forge
     lcms2                     2.16                 hb7c19ff_0    conda-forge
     ld_impl_linux-64          2.40                 h41732ed_0    conda-forge
     lerc                      4.0.0                h27087fc_0    conda-forge
     libabseil                 20230802.1      cxx17_h59595ed_0    conda-forge
     libarrow                  14.0.2           he2c5238_5_cpu    conda-forge
     libarrow-acero            14.0.2           h59595ed_5_cpu    conda-forge
     libarrow-dataset          14.0.2           h59595ed_5_cpu    conda-forge
     libarrow-flight           14.0.2           hdc44a87_5_cpu    conda-forge
     libarrow-flight-sql       14.0.2           hfbc7f12_5_cpu    conda-forge
     libarrow-gandiva          14.0.2           hacb8726_5_cpu    conda-forge
     libarrow-substrait        14.0.2           hfbc7f12_5_cpu    conda-forge
     libblas                   3.9.0           21_linux64_openblas    conda-forge
     libbrotlicommon           1.1.0                hd590300_1    conda-forge
     libbrotlidec              1.1.0                hd590300_1    conda-forge
     libbrotlienc              1.1.0                hd590300_1    conda-forge
     libcblas                  3.9.0           21_linux64_openblas    conda-forge
     libcrc32c                 1.1.2                h9c3ff4c_0    conda-forge
     libcublas                 12.0.1.189           hd3aeb46_3    conda-forge
     libcublas-dev             12.0.1.189           hd3aeb46_3    conda-forge
     libcudf                   23.12.01        cuda12_231208_g2ce46216b5_0    rapidsai
     libcufft                  11.0.0.21            hd3aeb46_2    conda-forge
     libcufile                 1.5.0.59             hd3aeb46_1    conda-forge
     libcufile-dev             1.5.0.59             hd3aeb46_1    conda-forge
     libcugraphops             23.12.00        cuda12_231206_g42d08202_0    nvidia
     libcurand                 10.3.1.50            hd3aeb46_1    conda-forge
     libcurand-dev             10.3.1.50            hd3aeb46_1    conda-forge
     libcurl                   8.5.0                hca28451_0    conda-forge
     libcusolver               11.4.2.57            hd3aeb46_2    conda-forge
     libcusolver-dev           11.4.2.57            hd3aeb46_2    conda-forge
     libcusparse               12.0.0.76            hd3aeb46_2    conda-forge
     libcusparse-dev           12.0.0.76            hd3aeb46_2    conda-forge
     libdeflate                1.19                 hd590300_0    conda-forge
     libedit                   3.1.20191231         he28a2e2_2    conda-forge
     libev                     4.33                 hd590300_2    conda-forge
     libevent                  2.1.12               hf998b51_1    conda-forge
     libexpat                  2.5.0                hcb278e6_1    conda-forge
     libffi                    3.4.2                h7f98852_5    conda-forge
     libgcc-devel_linux-64     11.4.0             h922705a_105    conda-forge
     libgcc-ng                 13.2.0               h807b86a_5    conda-forge
     libgd                     2.3.3                h119a65a_9    conda-forge
     libgfortran-ng            13.2.0               h69a702a_5    conda-forge
     libgfortran5              13.2.0               ha4646dd_5    conda-forge
     libglib                   2.78.3               h783c2da_0    conda-forge
     libgomp                   13.2.0               h807b86a_5    conda-forge
     libgoogle-cloud           2.12.0               hef10d8f_5    conda-forge
     libgrpc                   1.60.1               h74775cd_0    conda-forge
     libhwloc                  2.9.3           default_h554bfaf_1009    conda-forge
     libiconv                  1.17                 hd590300_2    conda-forge
     libidn2                   2.3.7                hd590300_0    conda-forge
     libjpeg-turbo             3.0.0                hd590300_1    conda-forge
     libkvikio                 23.12.00        cuda12_231206_gf90bfbe_0    rapidsai
     liblapack                 3.9.0           21_linux64_openblas    conda-forge
     libllvm14                 14.0.6               hcd5def8_4    conda-forge
     libllvm15                 15.0.7               hb3ce162_4    conda-forge
     libnghttp2                1.58.0               h47da74e_1    conda-forge
     libnl                     3.9.0                hd590300_0    conda-forge
     libnsl                    2.0.1                hd590300_0    conda-forge
     libnuma                   2.0.16               h0b41bf4_1    conda-forge
     libnvjitlink              12.0.76              hd3aeb46_2    conda-forge
     libopenblas               0.3.26          pthreads_h413a1c8_0    conda-forge
     libparquet                14.0.2           h352af49_5_cpu    conda-forge
     libpng                    1.6.42               h2797004_0    conda-forge
     libprotobuf               4.25.1               hf27288f_1    conda-forge
     libraft                   23.12.00        cuda12_231206_g9e2d6277_0    rapidsai
     libraft-headers           23.12.00        cuda12_231206_g9e2d6277_0    rapidsai
     libraft-headers-only      23.12.00        cuda12_231206_g9e2d6277_0    rapidsai
     libre2-11                 2023.06.02           h7a70373_0    conda-forge
     librmm                    23.12.00        cuda12_231206_g2db5cbb3_0    rapidsai
     librsvg                   2.56.3               he3f83f7_1    conda-forge
     libsanitizer              11.4.0               h4dcbe23_5    conda-forge
     libsodium                 1.0.18               h36c2ea0_1    conda-forge
     libsqlite                 3.45.1               h2797004_0    conda-forge
     libssh2                   1.11.0               h0841786_0    conda-forge
     libstdcxx-devel_linux-64  11.4.0             h922705a_105    conda-forge
     libstdcxx-ng              13.2.0               h7e041cc_5    conda-forge
     libthrift                 0.19.0               hb90f79a_1    conda-forge
     libtiff                   4.6.0                ha9c0a0a_2    conda-forge
     libunistring              0.9.10               h7f98852_0    conda-forge
     libutf8proc               2.8.0                h166bdaf_0    conda-forge
     libuuid                   2.38.1               h0b41bf4_0    conda-forge
     libuv                     1.47.0               hd590300_0    conda-forge
     libwebp                   1.3.2                h658648e_1    conda-forge
     libwebp-base              1.3.2                hd590300_0    conda-forge
     libwholegraph             23.12.00        cuda12_231206_g34b185e_0    rapidsai
     libxcb                    1.15                 h0b41bf4_0    conda-forge
     libxcrypt                 4.4.36               hd590300_1    conda-forge
     libxml2                   2.12.5               h232c23b_0    conda-forge
     libzlib                   1.2.13               hd590300_5    conda-forge
     llvmlite                  0.40.1          py310h1b8f574_0    conda-forge
     locket                    1.0.0              pyhd8ed1ab_0    conda-forge
     lz4                       4.3.3           py310h350c4a5_0    conda-forge
     lz4-c                     1.9.4                hcb278e6_0    conda-forge
     markdown                  3.5.2              pyhd8ed1ab_0    conda-forge
     markdown-it-py            3.0.0              pyhd8ed1ab_0    conda-forge
     markupsafe                2.1.5           py310h2372a71_0    conda-forge
     matplotlib-base           3.8.2           py310h62c0568_0    conda-forge
     matplotlib-inline         0.1.6              pyhd8ed1ab_0    conda-forge
     mdurl                     0.1.2              pyhd8ed1ab_0    conda-forge
     mistune                   3.0.2              pyhd8ed1ab_0    conda-forge
     mpi                       1.0                     openmpi    conda-forge
     msgpack-python            1.0.7           py310hd41b1e2_0    conda-forge
     multidict                 6.0.5           py310h2372a71_0    conda-forge
     munkres                   1.1.4              pyh9f0ad1d_0    conda-forge
     nbclient                  0.8.0              pyhd8ed1ab_0    conda-forge
     nbconvert                 7.16.0             pyhd8ed1ab_0    conda-forge
     nbconvert-core            7.16.0             pyhd8ed1ab_0    conda-forge
     nbconvert-pandoc          7.16.0             pyhd8ed1ab_0    conda-forge
     nbformat                  5.9.2              pyhd8ed1ab_0    conda-forge
     nbsphinx                  0.9.3              pyhd8ed1ab_0    conda-forge
     nccl                      2.20.3.1             h3a97aeb_0    conda-forge
     ncurses                   6.4                  h59595ed_2    conda-forge
     nest-asyncio              1.6.0              pyhd8ed1ab_0    conda-forge
     networkx                  3.2.1              pyhd8ed1ab_0    conda-forge
     ninja                     1.11.1               h924138e_0    conda-forge
     nodeenv                   1.8.0              pyhd8ed1ab_0    conda-forge
     notebook                  7.1.0              pyhd8ed1ab_0    conda-forge
     notebook-shim             0.2.3              pyhd8ed1ab_0    conda-forge
     numba                     0.57.1          py310h0f6aa51_0    conda-forge
     numpy                     1.24.4          py310ha4c1d20_0    conda-forge
     numpydoc                  1.6.0              pyhd8ed1ab_0    conda-forge
     nvcomp                    3.0.4                h10b603f_1    conda-forge
     nvtx                      0.2.8           py310h2372a71_1    conda-forge
     openjpeg                  2.5.0                h488ebb8_3    conda-forge
     openmpi                   5.0.1              h4970cb7_101    conda-forge
     openssl                   3.2.1                hd590300_0    conda-forge
     orc                       1.9.2                h7829240_1    conda-forge
     overrides                 7.7.0              pyhd8ed1ab_0    conda-forge
     packaging                 23.2               pyhd8ed1ab_0    conda-forge
     pandas                    1.5.3           py310h9b08913_1    conda-forge
     pandoc                    3.1.11.1             ha770c72_0    conda-forge
     pandocfilters             1.5.0              pyhd8ed1ab_0    conda-forge
     pango                     1.50.14              ha41ecd1_2    conda-forge
     parso                     0.8.3              pyhd8ed1ab_0    conda-forge
     partd                     1.4.1              pyhd8ed1ab_0    conda-forge
     pcre2                     10.42                hcad00b1_0    conda-forge
     pexpect                   4.9.0              pyhd8ed1ab_0    conda-forge
     pickleshare               0.7.5                   py_1003    conda-forge
     pillow                    10.2.0          py310h01dd4db_0    conda-forge
     pip                       24.0               pyhd8ed1ab_0    conda-forge
     pixman                    0.43.2               h59595ed_0    conda-forge
     pkgutil-resolve-name      1.3.10             pyhd8ed1ab_1    conda-forge
     platformdirs              4.2.0              pyhd8ed1ab_0    conda-forge
     pluggy                    1.4.0              pyhd8ed1ab_0    conda-forge
     pre-commit                3.6.1              pyha770c72_0    conda-forge
     prometheus_client         0.19.0             pyhd8ed1ab_0    conda-forge
     prompt-toolkit            3.0.42             pyha770c72_0    conda-forge
     protobuf                  4.25.1          py310h620c231_0    conda-forge
     psutil                    5.9.8           py310h2372a71_0    conda-forge
     pthread-stubs             0.4               h36c2ea0_1001    conda-forge
     ptyprocess                0.7.0              pyhd3deb0d_0    conda-forge
     pure_eval                 0.2.2              pyhd8ed1ab_0    conda-forge
     py-cpuinfo                9.0.0              pyhd8ed1ab_0    conda-forge
     pyarrow                   14.0.2          py310hf9e7431_5_cpu    conda-forge
     pyarrow-hotfix            0.6                pyhd8ed1ab_0    conda-forge
     pycparser                 2.21               pyhd8ed1ab_0    conda-forge
     pydata-sphinx-theme       0.15.2             pyhd8ed1ab_0    conda-forge
     pygments                  2.17.2             pyhd8ed1ab_0    conda-forge
     pylibcugraphops           23.12.00        cuda12_py310_231206_g42d08202_0    nvidia
     pylibraft                 23.12.00        cuda12_py310_231206_g9e2d6277_0    rapidsai
     pylibwholegraph           23.12.00        cuda12_py310_231206_g34b185e_0    rapidsai
     pynvml                    11.4.1             pyhd8ed1ab_0    conda-forge
     pyparsing                 3.1.1              pyhd8ed1ab_0    conda-forge
     pysocks                   1.7.1              pyha2e5f31_6    conda-forge
     pytest                    8.0.0              pyhd8ed1ab_0    conda-forge
     pytest-benchmark          4.0.0              pyhd8ed1ab_0    conda-forge
     pytest-cov                4.1.0              pyhd8ed1ab_0    conda-forge
     pytest-mpl                0.16.1             pyhd8ed1ab_0    conda-forge
     pytest-xdist              3.5.0              pyhd8ed1ab_0    conda-forge
     python                    3.10.13         hd12c33a_1_cpython    conda-forge
     python-dateutil           2.8.2              pyhd8ed1ab_0    conda-forge
     python-fastjsonschema     2.19.1             pyhd8ed1ab_0    conda-forge
     python-json-logger        2.0.7              pyhd8ed1ab_0    conda-forge
     python-louvain            0.16               pyhd8ed1ab_0    conda-forge
     python_abi                3.10                    4_cp310    conda-forge
     pytz                      2024.1             pyhd8ed1ab_0    conda-forge
     pyyaml                    6.0.1           py310h2372a71_1    conda-forge
     pyzmq                     25.1.2          py310h795f18f_0    conda-forge
     raft-dask                 23.12.00        cuda12_py310_231206_g9e2d6277_0    rapidsai
     rapids-dask-dependency    23.12.01                      0    rapidsai
     rdma-core                 50.0                 hd3aeb46_0    conda-forge
     re2                       2023.06.02           h2873b5e_0    conda-forge
     readline                  8.2                  h8228510_1    conda-forge
     recommonmark              0.7.1              pyhd8ed1ab_0    conda-forge
     referencing               0.33.0             pyhd8ed1ab_0    conda-forge
     requests                  2.31.0             pyhd8ed1ab_0    conda-forge
     rfc3339-validator         0.1.4              pyhd8ed1ab_0    conda-forge
     rfc3986-validator         0.1.1              pyh9f0ad1d_0    conda-forge
     rhash                     1.4.4                hd590300_0    conda-forge
     rich                      13.7.0             pyhd8ed1ab_0    conda-forge
     rmm                       23.12.00        cuda12_py310_231206_g2db5cbb3_0    rapidsai
     rpds-py                   0.17.1          py310hcb5633a_0    conda-forge
     s2n                       1.4.3                h06160fa_0    conda-forge
     scikit-build              0.17.6             pyh4af843d_0    conda-forge
     scikit-learn              1.4.0           py310h1fdf081_0    conda-forge
     scipy                     1.12.0          py310hb13e2d6_2    conda-forge
     send2trash                1.8.2              pyh41d4057_0    conda-forge
     setuptools                69.0.3             pyhd8ed1ab_0    conda-forge
     six                       1.16.0             pyh6c4a22f_0    conda-forge
     snappy                    1.1.10               h9fff704_0    conda-forge
     sniffio                   1.3.0              pyhd8ed1ab_0    conda-forge
     snowballstemmer           2.2.0              pyhd8ed1ab_0    conda-forge
     sortedcontainers          2.4.0              pyhd8ed1ab_0    conda-forge
     soupsieve                 2.5                pyhd8ed1ab_1    conda-forge
     spdlog                    1.11.0               h9b3ece8_1    conda-forge
     sphinx                    5.3.0              pyhd8ed1ab_0    conda-forge
     sphinx-copybutton         0.5.2              pyhd8ed1ab_0    conda-forge
     sphinx-markdown-tables    0.0.17             pyh6c4a22f_0    conda-forge
     sphinxcontrib-applehelp   1.0.8              pyhd8ed1ab_0    conda-forge
     sphinxcontrib-devhelp     1.0.6              pyhd8ed1ab_0    conda-forge
     sphinxcontrib-htmlhelp    2.0.5              pyhd8ed1ab_0    conda-forge
     sphinxcontrib-jsmath      1.0.1              pyhd8ed1ab_0    conda-forge
     sphinxcontrib-qthelp      1.0.7              pyhd8ed1ab_0    conda-forge
     sphinxcontrib-serializinghtml 1.1.10             pyhd8ed1ab_0    conda-forge
     sphinxcontrib-websupport  1.2.7              pyhd8ed1ab_0    conda-forge
     stack_data                0.6.2              pyhd8ed1ab_0    conda-forge
     sysroot_linux-64          2.17                h4a8ded7_13    conda-forge
     tabulate                  0.9.0              pyhd8ed1ab_1    conda-forge
     tblib                     3.0.0              pyhd8ed1ab_0    conda-forge
     terminado                 0.18.0             pyh0d859eb_0    conda-forge
     threadpoolctl             3.2.0              pyha21a80b_0    conda-forge
     tinycss2                  1.2.1              pyhd8ed1ab_0    conda-forge
     tk                        8.6.13          noxft_h4845f30_101    conda-forge
     toml                      0.10.2             pyhd8ed1ab_0    conda-forge
     tomli                     2.0.1              pyhd8ed1ab_0    conda-forge
     toolz                     0.12.1             pyhd8ed1ab_0    conda-forge
     tornado                   6.3.3           py310h2372a71_1    conda-forge
     traitlets                 5.14.1             pyhd8ed1ab_0    conda-forge
     types-python-dateutil     2.8.19.20240106    pyhd8ed1ab_0    conda-forge
     typing-extensions         4.9.0                hd8ed1ab_0    conda-forge
     typing_extensions         4.9.0              pyha770c72_0    conda-forge
     typing_utils              0.1.0              pyhd8ed1ab_0    conda-forge
     tzdata                    2024a                h0c530f3_0    conda-forge
     ucx                       1.15.0               h6d2d1ec_3    conda-forge
     ucx-proc                  1.0.0                       gpu    rapidsai
     ucx-py                    0.35.00         py310_231206_gb5f60ca_0    rapidsai
     ukkonen                   1.0.1           py310hd41b1e2_4    conda-forge
     unicodedata2              15.1.0          py310h2372a71_0    conda-forge
     uri-template              1.3.0              pyhd8ed1ab_0    conda-forge
     urllib3                   2.2.0              pyhd8ed1ab_0    conda-forge
     virtualenv                20.25.0            pyhd8ed1ab_0    conda-forge
     wcwidth                   0.2.13             pyhd8ed1ab_0    conda-forge
     webcolors                 1.13               pyhd8ed1ab_0    conda-forge
     webencodings              0.5.1              pyhd8ed1ab_2    conda-forge
     websocket-client          1.7.0              pyhd8ed1ab_0    conda-forge
     wget                      1.20.3               ha35d2d1_1    conda-forge
     wheel                     0.42.0             pyhd8ed1ab_0    conda-forge
     xorg-kbproto              1.0.7             h7f98852_1002    conda-forge
     xorg-libice               1.1.1                hd590300_0    conda-forge
     xorg-libsm                1.2.4                h7391055_0    conda-forge
     xorg-libx11               1.8.7                h8ee46fc_0    conda-forge
     xorg-libxau               1.0.11               hd590300_0    conda-forge
     xorg-libxdmcp             1.1.3                h7f98852_0    conda-forge
     xorg-libxext              1.3.4                h0b41bf4_2    conda-forge
     xorg-libxrender           0.9.11               hd590300_0    conda-forge
     xorg-renderproto          0.11.1            h7f98852_1002    conda-forge
     xorg-xextproto            7.3.0             h0b41bf4_1003    conda-forge
     xorg-xproto               7.0.31            h7f98852_1007    conda-forge
     xyzservices               2023.10.1          pyhd8ed1ab_0    conda-forge
     xz                        5.2.6                h166bdaf_0    conda-forge
     yaml                      0.2.5                h7f98852_2    conda-forge
     yarl                      1.9.4           py310h2372a71_0    conda-forge
     zeromq                    4.3.5                h59595ed_0    conda-forge
     zict                      3.0.0              pyhd8ed1ab_0    conda-forge
     zipp                      3.17.0             pyhd8ed1ab_0    conda-forge
     zlib                      1.2.13               hd590300_5    conda-forge
     zstd                      1.5.5                hfc55251_0    conda-forge
     
</pre></details>

Other/Misc.

No response

Code of Conduct

  • I agree to follow cuGraph's Code of Conduct
  • I have searched the open bugs and have found no duplicates for this bug report
@aabbas90 aabbas90 added ? - Needs Triage Need team to review and classify bug Something isn't working labels Feb 14, 2024
@aabbas90 aabbas90 changed the title [BUG]: Version of CUB not compatible by thrust [BUG]: Version of CUB not compatible with thrust Feb 14, 2024
@aabbas90 aabbas90 mentioned this issue Feb 14, 2024
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@BradReesWork BradReesWork removed the ? - Needs Triage Need team to review and classify label Feb 14, 2024
@vyasr
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vyasr commented Feb 14, 2024 •
edited
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Were you at some point trying to build a newer version of cugraph before pinning to 23.12? This line from your build log

-- Found CUB: /home/ahabbas/projects/cugraph/cpp/build/_deps/cccl-src/cub/cub/cmake/cub-config.cmake (found suitable version "2.2.0.0", minimum required is "2.2.0.0")

indicates that your build directory has artifacts corresponding to after cugraph was updated to use CCCL 2.2, which was a change that was only made in RAPIDS 24.02 (see #4052). This is causing some sort of incompatibility between the versions of these libraries that are installed vs what is in your build.

Do you observer the same behavior with a clean build directory?

@aabbas90
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aabbas90 commented Feb 15, 2024 •
edited
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Thank you for the nice catch. It is building now. Closing the issue.

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