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Hi, I would like to use chooseR for a single cell dataset, but when trying to use it on a Seurat object (SCTransform and PCA performed) I get the following error: "Error in CheckDots(...) : object 'integrated' not found". Is this an issue due to the updated version of Seurat? Is there a way to fix this issue?
Thanks for any input you can provide in advance
The text was updated successfully, but these errors were encountered:
Hi there, we have fixed a couple of bugs in the code, and forked a new version here: https://github.com/MenonLab/chooseR/
Could you see if the error still persists?
Hi, I would like to use chooseR for a single cell dataset, but when trying to use it on a Seurat object (SCTransform and PCA performed) I get the following error: "Error in CheckDots(...) : object 'integrated' not found". Is this an issue due to the updated version of Seurat? Is there a way to fix this issue?
Thanks for any input you can provide in advance
The text was updated successfully, but these errors were encountered: