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Copy file name to clipboardexpand all lines: README.md
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@@ -115,8 +115,8 @@ prank predict -c alphafold test.ds # use alphafold config and model (confi
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* Use `-vis_renderers 'pymol,chimerax'` to toggle specific renderers on/off.
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* Use `-vis_copy_proteins 0` to prevent copying protein structures to the visualizations directory (faster, but visualizations won't be portable).
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***SAS points data**: coordinates and ligandability scores for solvent-accessible surface (SAS) points are saved in `visualizations/data/{struct_file}_points.pdb.gz`. Here:
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* Residue sequence number (position 23-26 in the HETATM record) represents the pocket rank (with 0 indicating no pocket).
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* B-factor column indicates the ligandability score.
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* Residue sequence number (position 23-26) represents the pocket rank (0 indicates no pocket).
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