Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Add snakemake linting to pre-commit #83

Open
nesnoj opened this issue May 5, 2023 · 0 comments
Open

Add snakemake linting to pre-commit #83

nesnoj opened this issue May 5, 2023 · 0 comments
Assignees
Labels
development 🔧 wontfix 🚫 This will not be worked on

Comments

@nesnoj
Copy link
Member

nesnoj commented May 5, 2023

Our linters do not support snakemake files, snakemake comes with an own package snakefmt for this, see here. Integrate into pre-commit.

Manual linting can be triggered with snakemake --lint already.

@nesnoj nesnoj added the wontfix 🚫 This will not be worked on label Nov 6, 2023
@nesnoj nesnoj self-assigned this Nov 6, 2023
Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
development 🔧 wontfix 🚫 This will not be worked on
Projects
None yet
Development

No branches or pull requests

1 participant