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build.xml
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<project name="gigadb-cogini" default="build" basedir=".">
<description>
Build file for GigaDB
</description>
<!-- Set global properties for build -->
<property file="build.properties"/>
<property name="lib.dir" location="./lib"/>
<property name="backups.dir" location="./db"/>
<property name="css.dir" location="./css"/>
<property name="dataset.dir" location="./dataset"/>
<property name="files.dir" location="./files"/>
<property name="js.dir" location="./js"/>
<property name="less.dir" location="./less"/>
<property name="sphinx.dir" location="./sphinx"/>
<property name="TestGigaDB.dir" location="./TestGigaDB"/>
<property name="themes.dir" location="./themes"/>
<property name="protected.dir" location="./protected"/>
<property name="commands.dir" location="${protected.dir}/commands"/>
<property name="components.dir" location="${protected.dir}/components"/>
<property name="config.dir" location="${protected.dir}/config"/>
<property name="controllers.dir" location="${protected.dir}/controllers"/>
<property name="data.dir" location="${protected.dir}/data"/>
<property name="doc.dir" location="${protected.dir}/doc"/>
<property name="extensions.dir" location="${protected.dir}/extensions"/>
<property name="helpers.dir" location="${protected.dir}/helpers"/>
<property name="messages.dir" location="${protected.dir}/messages"/>
<property name="models.dir" location="${protected.dir}/models"/>
<property name="schema.dir" location="${protected.dir}/schema"/>
<property name="scripts.dir" location="${protected.dir}/scripts"/>
<property name="tests.dir" location="${protected.dir}/tests"/>
<property name="vendors.dir" location="${protected.dir}/vendors"/>
<property name="views.dir" location="${protected.dir}/views"/>
<property name="downloads.dir" location="./downloads"/>
<property name="conf.dir" location="./conf"/>
<!-- To be downloaded -->
<property name="images.dir" location="./images"/>
<property name="runtime.dir" location="${protected.dir}/runtime"/>
<property name="build.dir" location="./build"/>
<property name="dist.dir" location="./dist"/>
<target name="init">
<!-- Create time stamp -->
<tstamp/>
<!-- Check OS -->
<condition property="isMac" value="true">
<os family="mac" />
</condition>
<!-- Check for images.zip as test for downloads -->
<property name="images.zip" value="${downloads.dir}/images.zip"/>
<available file="${images.zip}" property="images.zip.present"/>
<!-- Check build dir -->
<available file="./${build.dir}" type="dir" property="build.found"/>
</target>
<target name="download" depends="init" unless="images.zip.present">
<mkdir dir="${downloads.dir}"/>
<get src="https://drive.google.com/a/gigasciencejournal.com/uc?id=0BwkLeOIewSZCYlhuaFF0NHhxUkk" dest="${downloads.dir}/images.zip"/>
<!-- Sphinx indices -->
<mkdir dir="${downloads.dir}/sphinx"/>
<get src="https://drive.google.com/a/gigasciencejournal.com/uc?id=0BwkLeOIewSZCVDRET2FsN2QzWDA" dest="${downloads.dir}/sphinx/sphinx_indices.zip"/>
<!-- /protected/config/local.php -->
<!--<get src="http://drive.google.com/a/gigasciencejournal.com/uc?id=0BwkLeOIewSZCLVpqTklEYzhJRTQ" dest="${downloads.dir}/local.php"/>-->
<!-- protected/config/data -->
<!--<get src="https://drive.google.com/a/gigasciencejournal.com/uc?id=0BwkLeOIewSZCMWhoemxPMldPeTQ" dest="${downloads.dir}/protected-config-data.zip"/>-->
<!-- protected/data -->
<!--<get src="https://drive.google.com/a/gigasciencejournal.com/uc?id=0BwkLeOIewSZCVDBIdjRSU25ja1E" dest="${downloads.dir}/data_fresh.sql"/>-->
<!-- protected/runtime -->
<!-- Seems like a load of logs so probably don't need this -->
<!--<get src="https://drive.google.com/a/gigasciencejournal.com/uc?id=0BwkLeOIewSZCdUUxZV9FNzVkNkU" dest="${downloads.dir}/protected-runtime.zip"/>-->
</target>
<target name="build" depends="download" unless="build.found">
<mkdir dir="${build.dir}"/>
<!-- Sort out folders first -->
<mkdir dir="${build.dir}/css"/>
<copy todir="${build.dir}/css">
<fileset dir="${css.dir}"/>
</copy>
<mkdir dir="${build.dir}/dataset"/>
<copy todir="${build.dir}/dataset">
<fileset dir="${dataset.dir}"/>
</copy>
<mkdir dir="${build.dir}/files"/>
<copy todir="${build.dir}/files">
<fileset dir="${files.dir}"/>
</copy>
<mkdir dir="${build.dir}/images"/>
<unzip src="${downloads.dir}/images.zip" dest="${build.dir}/images"/>
<mkdir dir="${build.dir}/js"/>
<copy todir="${build.dir}/js">
<fileset dir="${js.dir}"/>
</copy>
<mkdir dir="${build.dir}/less"/>
<copy todir="${build.dir}/less">
<fileset dir="${less.dir}"/>
</copy>
<mkdir dir="${build.dir}/protected"/>
<copy todir="${build.dir}/protected">
<fileset dir="${protected.dir}">
<exclude name="**/*db.json*"/>
<exclude name="**/*local.php*"/>
</fileset>
</copy>
<!-- Copy db.json.sample into /protected/config and replace tokens-->
<copy file="${conf.dir}/db.json.sample" todir="${build.dir}/protected/config"/>
<move file="${build.dir}/protected/config/db.json.sample" tofile="${build.dir}/protected/config/db.json"
overwrite="true"/>
<!-- Copy local.php.sample into /protected/config and replace tokens-->
<copy file="${conf.dir}/local.php.sample" todir="${build.dir}/protected/config"/>
<move file="${build.dir}/protected/config/local.php.sample" tofile="${build.dir}/protected/config/local.php"
overwrite="true"/>
<replace file="${build.dir}/protected/config/local.php" propertyFile="./build.properties">
<replacefilter token="@home.url@" property="home.url"/>
<replacefilter token="@timezone@" property="timezone"/>
<replacefilter token="@adminEmail@" property="adminEmail"/>
<replacefilter token="@app_email_name@" property="app_email_name"/>
<replacefilter token="@app_email@" property="app_email"/>
<replacefilter token="@email_prefix@" property="email_prefix"/>
<replacefilter token="@support_email@" property="support_email"/>
<replacefilter token="@email_prefix@" property="email_prefix"/>
<replacefilter token="@notify_email@" property="notify_email"/>
<replacefilter token="@recaptcha_publickey@" property="recaptcha_publickey"/>
<replacefilter token="@recaptcha_privatekey@" property="recaptcha_privatekey"/>
<replacefilter token="@google_analytics_profile_1@" property="google_analytics_profile_1"/>
<replacefilter token="@sphinx_servername@" property="sphinx_servername"/>
<replacefilter token="@sphinx_port@" property="sphinx_port"/>
<replacefilter token="@mc_apikey@" property="mc_apikey"/>
<replacefilter token="@mc_listID@" property="mc_listID"/>
<replacefilter token="@less_dev_mode@" property="less_dev_mode"/>
<replacefilter token="@google_analytics_profile_2@" property="google_analytics_profile_2"/>
</replace>
<mkdir dir="${build.dir}/protected/runtime"/>
<mkdir dir="${build.dir}/assets"/>
<mkdir dir="${build.dir}/TestGigaDB"/>
<copy todir="${build.dir}/TestGigaDB">
<fileset dir="${TestGigaDB.dir}"/>
</copy>
<mkdir dir="${build.dir}/themes"/>
<copy todir="${build.dir}/themes">
<fileset dir="${themes.dir}"/>
</copy>
<!-- Copy single files to build -->
<copy file="./crontab" todir="${build.dir}"/>
<copy file="./favicon.ico" todir="${build.dir}"/>
<copy file="./index.php" todir="${build.dir}"/>
<copy file="./sitemap.xml" todir="${build.dir}"/>
<copy file="./Vagrantfile" todir="${build.dir}"/>
</target>
<target name="if_mac" depends="build" if="isMac">
<!-- If using Mac, copy over Utils.php.mac -->
<echo message="We are on a Mac..."/>
<copy file="${conf.dir}/Utils.php.mac" tofile="${build.dir}/protected/vendors/Utils.php"
overwrite="true"/>
</target>
<!-- ######################### -->
<!-- Local server installation -->
<!-- ######################### -->
<target name="build-local" depends="if_mac">
<!-- Copy set_env.sh into /protected/scripts and replace tokens-->
<copy file="${conf.dir}/set_env.sh.sample" todir="${build.dir}/protected/scripts"/>
<move file="${build.dir}/protected/scripts/set_env.sh.sample" tofile="${build.dir}/protected/scripts/set_env.sh"
overwrite="true"/>
<replace file="${build.dir}/protected/scripts/set_env.sh"
propertyFile="./build.properties">
<replacefilter token="@db.name@" property="local.db.name"/>
<replacefilter token="@db.host@" property="local.db.host"/>
<replacefilter token="@db.user@" property="local.db.user"/>
<replacefilter token="@db.password@" property="local.db.password"/>
</replace>
<replace file="${build.dir}/protected/config/db.json"
propertyFile="./build.properties">
<replacefilter token="@db.name@" property="local.db.name"/>
<replacefilter token="@db.host@" property="local.db.host"/>
<replacefilter token="@db.user@" property="local.db.user"/>
<replacefilter token="@db.password@" property="local.db.password"/>
</replace>
<!-- For Sphinx -->
<mkdir dir="${build.dir}/sphinx"/>
<copy todir="${build.dir}/sphinx">
<fileset dir="./sphinx"/>
</copy>
<move file="${build.dir}/sphinx/sphinx.conf.sample" tofile="${build.dir}/sphinx/sphinx.conf"
overwrite="true"/>
<replace file="${build.dir}/sphinx/sphinx.conf" propertyFile="./build.properties">
<replacefilter token="@type@" property="local.type"/>
<replacefilter token="@sql_host@" property="local.sql.host"/>
<replacefilter token="@sql_user@" property="local.sql.user"/>
<replacefilter token="@sql_pass@" property="local.sql.pass"/>
<replacefilter token="@sql_db@" property="local.sql.db"/>
<replacefilter token="@sql_port@" property="local.sql.port"/>
<replacefilter token="@dataset.path@" property="local.dataset.path"/>
<replacefilter token="@file.path@" property="local.file.path"/>
<replacefilter token="@manuscript.path@" property="local.manuscript.path"/>
<replacefilter token="@log@" property="local.log"/>
<replacefilter token="@query_log@" property="local.query.log"/>
<replacefilter token="@pid_file@" property="local.pid.file"/>
<replacefilter token="@binlog_path@" property="local.binlog.path"/>
</replace>
<chmod file="${build.dir}/sphinx/setup-sphinx.sh" perm="ugo+x"/>
<!-- Copy over index files -->
<unzip src="${downloads.dir}/sphinx/sphinx_indices.zip" dest="${build.dir}/protected/config/data"/>
</target>
<target name="install-local" depends="build-local"
description="Install gigadb on local filesystem">
<!-- Check we have write privileges -->
<fail message="The directory ${local.install.path} is not writable.">
<condition>
<not>
<isfileselected file="${local.install.path}" >
<writable/>
</isfileselected>
</not>
</condition>
</fail>
<echo message="Web server folder is writable"/>
<!--Delete old web site -->
<exec executable="sudo" failonerror="true">
<arg line="rm -fr /var/www/hosts/gigadb.cogini.com/htdocs"/>
</exec>
<exec executable="sudo" failonerror="true">
<arg line="rm -fr /var/www/hosts/gigadb.cogini.com/logs"/>
</exec>
<!--<delete includeemptydirs="true">-->
<!--<fileset dir="${local.install.path}" includes="**/*"/>-->
<!--</delete>-->
<!--<!–Delete logs in old web site –>-->
<!--<delete includeemptydirs="true">-->
<!--<fileset dir="${local.install.path.logs}" includes="**/*"/>-->
<!--</delete>-->
<copy todir="${local.install.path}">
<fileset dir="${build.dir}"/>
</copy>
<mkdir dir="${local.install.path.logs}"/>
<mkdir dir="${local.install.path.logs}/binlog"/>
<!-- Configure write permissions for runtime and assets folders -->
<chmod dir="${local.install.path}/protected/runtime" perm="ugo+rw" type="dir"/>
<chmod dir="${local.install.path}/assets" perm="ugo+rw" type="dir"/>
<!-- Sphinx stuff -->
<copy file="${build.dir}/sphinx/sphinx.conf" todir="/usr/local/etc"/>
<!--<exec executable="sudo" failonerror="true">-->
<!--<arg line="apachectl restart"/>-->
<!--</exec>-->
</target>
<!-- #################### -->
<!-- Local database tasks -->
<!-- #################### -->
<target name="dropdb-local" description="Removes database files">
<echo message="Deleting gigadb database"/>
<sql driver="org.postgresql.Driver"
classpath="${lib.dir}/postgresql-9.2-1002.jdbc4.jar"
url="${local.template1.dburl}"
userid="${local.db.user}"
password="${local.db.password}"
autocommit="true">
DROP DATABASE ${local.db.name};
</sql>
</target>
<target name="createdb-local" depends="dropdb-local" description="Create local postgresql database">
<echo message="Creating new empty gigadb database"/>
<sql driver="org.postgresql.Driver"
classpath="${lib.dir}/postgresql-9.2-1002.jdbc4.jar"
url="${local.template1.dburl}"
userid="${local.db.user}"
password="${local.db.password}"
autocommit="true">
CREATE DATABASE ${local.db.name};
</sql>
</target>
<target name="restoredb-local" depends="createdb-local"
description="Restores gigadb from backup files">
<echo message="Restoring gigadb database"/>
<echo message="This might take some time..."/>
<!-- Get SQL dump of gigadb -->
<exec failifexecutionfails="true" failonerror="true"
executable="pg_restore">
<env key="PGPASSWORD" value="${local.db.password}"/>
<arg value="-i"/>
<arg value="-U"/>
<arg value="${local.db.user}"/>
<arg value="-h"/>
<arg value="${local.db.host}"/>
<arg value="-d"/>
<arg value="${local.db.name}"/>
<arg value="${backups.dir}/${local.backup.file}"/>
</exec>
</target>
<!-- ################################### -->
<!-- Local Sphinx tasks - to be finished -->
<!-- ################################### -->
<target name="check-index-install-path">
<condition property="index_found_install_path">
<available file="${local.install.path}/protected/config/data/dataset.spi" type="file"/>
</condition>
</target>
<target name="check-index-root" depends="check-index-install-path" unless="index_found_install_path">
<condition property="index_found_root">
<available file="./sphinx/data/dataset.spi" type="file"/>
</condition>
</target>
<target name="sphinx-local" depends="check-index-install-path" unless="index_found_install_path"
description="Set up Sphinx search engine on local machine">
<!-- Check presence of indices at protected/config/data -->
<!-- If present, do nothing -->
<!-- If not present, check presence of indices in root folder -->
<!-- If present, copy into protected/config/data -->
<!-- If not present, execute setup-sphinx.sh and copy indices into root folder -->
<echo message="This task might take over 20 mins to generate the Sphinx indices..."/>
<!-- Copy sphinx.conf to /etc/sphinx -->
<copy file="${build.dir}/sphinx/sphinx.conf" todir="/etc/sphinx"/>
<exec executable="${build.dir}/sphinx/setup-sphinx.sh"
failonerror="true"
osfamily="unix"/>
</target>
<!-- ############################### -->
<!-- Development server installation -->
<!-- ############################### -->
<target name="build-dev" depends="build">
<!-- Copy set_env.sh into /protected/scripts and replace tokens-->
<copy file="${conf.dir}/set_env.sh.sample" todir="${build.dir}/protected/scripts"/>
<move file="${build.dir}/protected/scripts/set_env.sh.sample" tofile="${build.dir}/protected/scripts/set_env.sh"
overwrite="true"/>
<replace file="${build.dir}/protected/scripts/set_env.sh"
propertyFile="./build.properties">
<replacefilter token="@db.name@" property="dev.db.name"/>
<replacefilter token="@db.host@" property="dev.db.host"/>
<replacefilter token="@db.user@" property="dev.db.user"/>
<replacefilter token="@db.password@" property="dev.db.password"/>
</replace>
<replace file="${build.dir}/protected/config/db.json"
propertyFile="./build.properties">
<replacefilter token="@db.name@" property="dev.db.name"/>
<replacefilter token="@db.host@" property="dev.db.host"/>
<replacefilter token="@db.user@" property="dev.db.user"/>
<replacefilter token="@db.password@" property="dev.db.password"/>
</replace>
<!-- For Sphinx -->
<mkdir dir="${build.dir}/sphinx"/>
<copy todir="${build.dir}/sphinx">
<fileset dir="./sphinx"/>
</copy>
<move file="${build.dir}/sphinx/sphinx.conf.sample" tofile="${build.dir}/sphinx/sphinx.conf"
overwrite="true"/>
<replace file="${build.dir}/sphinx/sphinx.conf" propertyFile="./build.properties">
<replacefilter token="@type@" property="dev.type"/>
<replacefilter token="@sql_host@" property="dev.sql.host"/>
<replacefilter token="@sql_user@" property="dev.sql.user"/>
<replacefilter token="@sql_pass@" property="dev.sql.pass"/>
<replacefilter token="@sql_db@" property="dev.sql.db"/>
<replacefilter token="@sql_port@" property="dev.sql.port"/>
<replacefilter token="@dataset.path@" property="dev.dataset.path"/>
<replacefilter token="@file.path@" property="dev.file.path"/>
<replacefilter token="@manuscript.path@" property="dev.manuscript.path"/>
<replacefilter token="@log@" property="dev.log"/>
<replacefilter token="@query_log@" property="dev.query.log"/>
<replacefilter token="@pid_file@" property="dev.pid.file"/>
<replacefilter token="@binlog_path@" property="dev.binlog.path"/>
</replace>
<chmod file="${build.dir}/sphinx/setup-sphinx.sh" perm="ugo+x"/>
</target>
<target name="install-dev" depends="build-dev"
description="Install GigaDB on development server">
<!-- Zip up build folder -->
<!--<echo message="Creating zip file"/>-->
<!--<mkdir dir="${dist.dir}"/>-->
<!--<zip destfile="${dist.dir}/gigadb.zip"-->
<!--basedir="${build.dir}"/>-->
<!-- Delete contents of gigadb folder on development server -->
<sshexec host="${dev.unix.server}"
username="${dev.unix.user}"
password="${dev.unix.password}"
command="rm -fr ${dev.install.path}"/>
<scp todir="${dev.unix.user}:${dev.unix.password}@${dev.unix.server}:${dev.install.path}" verbose="true" sftp="true">
<fileset dir="${build.dir}"/>
</scp>
<!-- Unzip contents -->
<!--<sshexec host="${dev.unix.server}"-->
<!--username="${dev.unix.user}"-->
<!--password="${dev.unix.password}"-->
<!--command="unzip -q ${dev.install.path}/gigadb.zip"/>-->
<!-- Need to create empty directories as scp task does not copy them over -->
<!-- Also need to make 2 folders writable by web process -->
<sshexec host="${dev.unix.server}"
username="${dev.unix.user}"
password="${dev.unix.password}"
commandResource="${conf.dir}/gigadb_config.sh"/>
</target>
<!-- ################################# -->
<!-- Development server database tasks -->
<!-- ################################# -->
<target name="dropdb-dev" description="Removes database files">
<echo message="Deleting gigadb database"/>
<sql driver="org.postgresql.Driver"
classpath="${lib.dir}/postgresql-9.2-1002.jdbc4.jar"
url="${dev.template1.dburl}"
userid="${dev.db.user}"
password="${dev.db.password}"
autocommit="true">
DROP DATABASE ${dev.db.name};
</sql>
</target>
<target name="createdb-dev" depends="dropdb-dev" description="Create dev postgresql database">
<echo message="Creating new empty gigadb database"/>
<sql driver="org.postgresql.Driver"
classpath="${lib.dir}/postgresql-9.2-1002.jdbc4.jar"
url="${dev.template1.dburl}"
userid="${dev.db.user}"
password="${dev.db.password}"
autocommit="true">
CREATE DATABASE ${dev.db.name};
</sql>
</target>
<target name="restoredb-dev" depends="createdb-dev"
description="Restores gigadb from backup files">
<echo message="Restoring gigadb database"/>
<echo message="This might take some time..."/>
<!-- Get SQL dump of gigadb -->
<exec failifexecutionfails="true" failonerror="true"
executable="pg_restore">
<env key="PGPASSWORD" value="${dev.db.password}"/>
<arg value="-i"/>
<arg value="-U"/>
<arg value="${dev.db.user}"/>
<arg value="-h"/>
<arg value="${dev.db.host}"/>
<arg value="-d"/>
<arg value="${dev.db.name}"/>
<arg value="${backups.dir}/${dev.backup.file}"/>
</exec>
</target>
<target name="clean" description="clean up">
<!-- Delete the GigaDB build directory -->
<delete dir="${build.dir}"/>
</target>
<target name="purge" depends="clean"
description="Removes build directory and downloads">
<delete dir="${downloads.dir}"/>
</target>
</project>