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install error #155

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yu-zhang-oYo opened this issue Dec 9, 2024 · 0 comments
Open

install error #155

yu-zhang-oYo opened this issue Dec 9, 2024 · 0 comments

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@yu-zhang-oYo
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Hi, when I am trying to install the SAIGE with 'R CMD INSTALL SAIGE', either with conda or source code, there is always such kind of error, I would like to know how to solve this problem. Please let me know if I need to provide more information. Thanks.

VCF.cpp:4:10: fatal error: savvy/reader.hpp: No such file or directory
    4 | #include "savvy/reader.hpp"
      |          ^~~~~~~~~~~~~~~~~~
compilation terminated.
make: *** [/N/u/yzh10/BigRed200/.conda/envs/RSAIGE/lib/R/etc/Makeconf:177: VCF.o] Error 1
ERROR: compilation failed for package ‘SAIGE’
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