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Hi,
I get the following error when running step2_SPAtests.R:
[1] "Analysis done! The results have been saved to 'dat_baseQCed_saige.single_variant.tsv'." Error: unexpected '}' in "}" Execution halted
[1] "Analysis done! The results have been saved to 'dat_baseQCed_saige.single_variant.tsv'."
Error: unexpected '}' in "}" Execution halted
I am using SAIGE v1.4.3 within a Singularity image built from the docker image: https://hub.docker.com/r/wzhou88/saige/tags
I tried to check the step2_SPAtests.R script itself but the curly brackets seem fine.
For information, the 'single_variants.tsv' file contains results. The error seems to happen after the file is written.
When running step2_SPAtests.R with the same files but an older version of SAIGE (v1.3.2), I do not get the error.
Please, let me know if you need more information.
The text was updated successfully, but these errors were encountered:
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Hi,
I get the following error when running step2_SPAtests.R:
[1] "Analysis done! The results have been saved to 'dat_baseQCed_saige.single_variant.tsv'."
Error: unexpected '}' in "}" Execution halted
I am using SAIGE v1.4.3 within a Singularity image built from the docker image:
https://hub.docker.com/r/wzhou88/saige/tags
I tried to check the step2_SPAtests.R script itself but the curly brackets seem fine.
For information, the 'single_variants.tsv' file contains results. The error seems to happen after the file is written.
When running step2_SPAtests.R with the same files but an older version of SAIGE (v1.3.2), I do not get the error.
Please, let me know if you need more information.
The text was updated successfully, but these errors were encountered: