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SNAP error #101

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ghost opened this issue Jun 15, 2021 · 0 comments
Open

SNAP error #101

ghost opened this issue Jun 15, 2021 · 0 comments

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@ghost
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ghost commented Jun 15, 2021

Hello everyone.!!

I did not understand the error that Companion is presenting and I did not find the motivation for it. What should I do to fix it?

Error executing process > 'run_snap'

Caused by:
Process run_snap terminated with an error exit status (2)

Command executed:

echo '##gff-version 3' > snap.gff3
snap -gff -quiet snap.hmm pseudo.pseudochr.fasta > snap.tmp
snap_gff_to_gff3.lua snap.tmp > snap.tmp.2
if [ -s 1 ]; then
gt gff3 -sort -tidy -retainids snap.tmp.2 > snap.gff3;
fi

Command exit status:
2

Command output:
(empty)

Command error:
ZOE ERROR (from snap): error opening file ((null)/HMM/snap.hmm)
ZOE library version 2013-02-16

Work dir:
/home/wanessa/work/6b/94be813b401ee67df7d4ab7bbc0277

Tip: when you have fixed the problem you can continue the execution adding the option -resume to the run command line

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