From 36730fc0d205b2e3d1c10cad9d35b98f87ed4e39 Mon Sep 17 00:00:00 2001 From: yumisims Date: Mon, 23 Sep 2024 22:49:34 +0100 Subject: [PATCH] add version for trio process --- subworkflows/local/genomescope_model.nf | 3 ++- subworkflows/local/trio_mode.nf | 7 +++++-- 2 files changed, 7 insertions(+), 3 deletions(-) diff --git a/subworkflows/local/genomescope_model.nf b/subworkflows/local/genomescope_model.nf index 51f4a5d..925bd20 100644 --- a/subworkflows/local/genomescope_model.nf +++ b/subworkflows/local/genomescope_model.nf @@ -77,7 +77,8 @@ workflow GENOMESCOPE_MODEL { ch_trio_data.pat, ch_trio_data.mat ) - + ch_versions = ch_versions.mix(TRIO_PROCESS.out.versions) + // // MODULE: GENERATE GENOMESCOPE KMER COVERAGE MODEL // diff --git a/subworkflows/local/trio_mode.nf b/subworkflows/local/trio_mode.nf index 28e2eb2..5c17bcd 100644 --- a/subworkflows/local/trio_mode.nf +++ b/subworkflows/local/trio_mode.nf @@ -11,11 +11,14 @@ workflow TRIO_MODE { main: ch_versions = Channel.empty() - + + // + // MODULE: GENERATE TRIO DATABASES AND KTABS FOR BOTH PAT AND MAT + // YAK_COUNT_PAT(patreads) FASTK_PAT(patreads) patdb_ch = YAK_COUNT_PAT.out.yak - patktab_ch = FASTK_PAT.out.ktab + patktab_ch = FASTK_PAT.out.ktab ch_versions = ch_versions.mix(YAK_COUNT_PAT.out.versions) ch_versions = ch_versions.mix(FASTK_PAT.out.versions) YAK_COUNT_MAT(matreads)