fixing ci pipeline for python3.9 and python3.13 #563
Workflow file for this run
This file contains bidirectional Unicode text that may be interpreted or compiled differently than what appears below. To review, open the file in an editor that reveals hidden Unicode characters.
Learn more about bidirectional Unicode characters
| name: CI | |
| on: [push, pull_request] | |
| jobs: | |
| build-Windows: | |
| runs-on: windows-latest | |
| strategy: | |
| matrix: | |
| python-version: ["3.9"] | |
| env: | |
| CONDA_ROOT: ${{github.workspace}}\..\tmp\miniforge | |
| CONDA_ENV_NAME: "testing_env" | |
| CONDA_PREFIX: ${{github.workspace}}\..\tmp\miniforge\envs\testing_env | |
| MINIFORGE_EXEC: ${{github.workspace}}\..\tmp\miniforge.exe | |
| steps: | |
| - uses: actions/checkout@v4 | |
| - name: Download Miniforge | |
| run: | | |
| if (-Not (Test-Path -Path $env:CONDA_ROOT)) { | |
| New-Item -ItemType Directory -Path $env:CONDA_ROOT | |
| } | |
| Invoke-WebRequest -Uri https://github.com/conda-forge/miniforge/releases/download/24.11.0-0/Miniforge3-24.11.0-0-Windows-x86_64.exe -OutFile $env:MINIFORGE_EXEC | |
| Start-Process -Wait -FilePath $env:MINIFORGE_EXEC -ArgumentList "/S", "/D=$env:CONDA_ROOT" | |
| - name: Add conda to PATH | |
| run: | | |
| echo "$env:CONDA_ROOT" | Out-File -Append -FilePath $env:GITHUB_PATH | |
| echo "$env:CONDA_ROOT\Scripts" | Out-File -Append -FilePath $env:GITHUB_PATH | |
| - name: Set up Miniforge | |
| run: | | |
| conda create -n $env:CONDA_ENV_NAME python=${{ matrix.python-version }} | |
| activate $env:CONDA_ENV_NAME | |
| conda install -y -c conda-forge -c schrodinger ` | |
| catch2=2.13.3 ` | |
| cxx-compiler ` | |
| collada2gltf ` | |
| freetype ` | |
| glew ` | |
| glm ` | |
| libpng ` | |
| libxml2 ` | |
| libnetcdf ` | |
| libffi ` | |
| pip | |
| conda info | |
| - name: Get additional sources | |
| run: | | |
| git clone --depth 1 https://github.com/rcsb/mmtf-cpp.git | |
| Copy-Item -Recurse -Path mmtf-cpp/include/mmtf\* -Destination "$env:CONDA_PREFIX\Library\include" | |
| git clone --depth 1 --single-branch --branch cpp_master https://github.com/msgpack/msgpack-c.git | |
| Copy-Item -Recurse -Path msgpack-c/include/msgpack\* -Destination "$env:CONDA_PREFIX\Library\include" | |
| dir mmtf-cpp/include/mmtf | |
| dir msgpack-c/include/msgpack | |
| dir "$env:CONDA_ROOT\envs\$env:CONDA_ENV_NAME\Library\include" | |
| - name: Build PyMOL | |
| run: | | |
| activate $env:CONDA_ENV_NAME | |
| pip install -v --config-settings testing=True .[dev] | |
| - name: Test | |
| run: | | |
| pymol -ckqy testing\testing.py --run all | |