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Original file line number | Diff line number | Diff line change |
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@@ -3,63 +3,13 @@ name: CI | |
on: [push, pull_request] | ||
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jobs: | ||
build-Linux: | ||
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runs-on: ubuntu-22.04 | ||
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strategy: | ||
matrix: | ||
python-version: ["3.9", "3.10", "3.11", "3.12", "3.13"] | ||
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steps: | ||
- uses: actions/checkout@v4 | ||
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- name: Set up Python | ||
uses: actions/setup-python@v5 | ||
with: | ||
python-version: ${{ matrix.python-version }} | ||
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- name: Install system dependencies | ||
run: | | ||
sudo apt-get update | ||
sudo apt-get --no-install-recommends install \ | ||
catch2 \ | ||
libfreetype6-dev \ | ||
libglew-dev \ | ||
libglm-dev \ | ||
libmsgpack-dev \ | ||
libnetcdf-dev \ | ||
libpng-dev \ | ||
libxml2-dev | ||
- name: Install collada2gltf | ||
run: | | ||
wget -nv https://anaconda.org/schrodinger/collada2gltf/2.1.4/download/linux-64/collada2gltf-2.1.4-h6bb024c_0.tar.bz2 | ||
sudo tar xf collada2gltf-*.tar.bz2 -C / bin/collada2gltf | ||
- name: Get additional sources | ||
run: | | ||
git clone --depth 1 https://github.com/rcsb/mmtf-cpp.git | ||
cp -R mmtf-cpp/include/mmtf* include/ | ||
- name: Build | ||
run: | | ||
pip install --upgrade pip | ||
pip install -v --config-settings testing=True '.[dev]' | ||
env: | ||
DEBUG: 1 | ||
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- name: Test | ||
run: | | ||
pymol -ckqy testing/testing.py --run all | ||
build-Windows: | ||
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runs-on: windows-latest | ||
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strategy: | ||
matrix: | ||
python-version: ["3.9", "3.10", "3.11", "3.12", "3.13"] | ||
python-version: ["3.9"] | ||
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env: | ||
CONDA_ROOT: ${{github.workspace}}\..\tmp\miniforge | ||
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@@ -85,19 +35,20 @@ jobs: | |
- name: Set up Miniforge | ||
run: | | ||
conda create -n $env:CONDA_ENV_NAME python=${{ matrix.python-version }} pip | ||
conda create -n $env:CONDA_ENV_NAME python=${{ matrix.python-version }} | ||
activate $env:CONDA_ENV_NAME | ||
conda install -y -c conda-forge -c schrodinger ` | ||
libpng ` | ||
catch2=2.13.3 ` | ||
cxx-compiler ` | ||
collada2gltf ` | ||
freetype ` | ||
glew ` | ||
libxml2 ` | ||
catch2=2.13.3 ` | ||
glm ` | ||
libpng ` | ||
libxml2 ` | ||
libnetcdf ` | ||
collada2gltf ` | ||
libffi ` | ||
cxx-compiler | ||
pip | ||
conda info | ||
- name: Get additional sources | ||
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@@ -113,68 +64,10 @@ jobs: | |
- name: Build PyMOL | ||
run: | | ||
activate $env:CONDA_ENV_NAME | ||
pip install -v --config-settings testing=True .[dev] | ||
python3 -m pip install -v .[dev] | ||
- name: Test | ||
run: | | ||
activate $env:CONDA_ENV_NAME | ||
pymol -ckqy testing\testing.py --run all | ||
build-MacOS: | ||
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runs-on: macos-latest | ||
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strategy: | ||
matrix: | ||
python-version: ["3.9", "3.10", "3.11", "3.12", "3.13"] | ||
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env: | ||
CONDA_ROOT: "/tmp/miniforge" | ||
CONDA_ENV_NAME: "testing_env" | ||
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steps: | ||
- uses: actions/[email protected] | ||
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- name: Download Miniforge | ||
run: | | ||
curl -L -o $CONDA_ROOT.sh https://github.com/conda-forge/miniforge/releases/download/24.11.0-0/Miniforge3-MacOSX-x86_64.sh | ||
bash $CONDA_ROOT.sh -b -p $CONDA_ROOT | ||
- name: Add conda to PATH | ||
run: | | ||
echo "${CONDA_ROOT}/bin" >> "$GITHUB_PATH" | ||
- name: Set up Miniforge | ||
run: | | ||
conda create -n $CONDA_ENV_NAME python=${{ matrix.python-version }} pip | ||
source activate $CONDA_ENV_NAME | ||
conda install -y -c conda-forge -c schrodinger \ | ||
libpng \ | ||
freetype \ | ||
glew \ | ||
libxml2 \ | ||
catch2=2.13.3 \ | ||
glm \ | ||
libnetcdf \ | ||
collada2gltf | ||
conda info | ||
- name: Get additional sources | ||
run: | | ||
source activate $CONDA_ENV_NAME | ||
git clone --depth 1 https://github.com/rcsb/mmtf-cpp.git | ||
cp -R mmtf-cpp/include/mmtf* ${CONDA_PREFIX}/include/ | ||
git clone --depth 1 --single-branch --branch cpp_master https://github.com/msgpack/msgpack-c.git | ||
cp -R msgpack-c/include/msgpack* ${CONDA_PREFIX}/include/ | ||
- name: Build PyMOL | ||
run: | | ||
source activate $CONDA_ENV_NAME | ||
export MACOSX_DEPLOYMENT_TARGET=12.0 | ||
pip install -v --config-settings testing=True '.[dev]' | ||
- name: Test | ||
run: | | ||
source activate $CONDA_ENV_NAME | ||
pymol -ckqy testing/testing.py --run all | ||
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