Merge pull request #1222 from CoffeaTeam/pre-commit-ci-update-config #5572
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name: CI/CD | |
on: | |
push: | |
branches: | |
- master | |
- backports-v0.7.x | |
- backports-v0.6.x | |
tags: | |
- v*.*.* | |
pull_request: | |
branches: | |
- master | |
- backports-v0.7.x | |
- backports-v0.6.x | |
# Run daily at 0:01 UTC | |
schedule: | |
- cron: '1 0 * * *' | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
jobs: | |
pre-commit: | |
name: pre-commit | |
runs-on: ubuntu-latest | |
steps: | |
- uses: actions/checkout@v4 | |
- uses: actions/setup-python@v5 | |
with: | |
python-version: "3.13" | |
- uses: pre-commit/[email protected] | |
with: | |
extra_args: --hook-stage manual --all-files | |
test: | |
runs-on: ${{ matrix.os }} | |
needs: pre-commit | |
strategy: | |
matrix: | |
os: [ubuntu-latest, macOS-latest, windows-latest] | |
java-version: [17] | |
java-distribution: ["corretto"] | |
python-version: ["3.9", "3.12"] | |
name: test coffea (${{ matrix.os }}) - python ${{ matrix.python-version }}, JDK${{ matrix.java-version }} | |
steps: | |
- uses: actions/checkout@v4 | |
with: | |
fetch-depth: 0 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Set up JDK ${{ matrix.java-distribution }}/${{ matrix.java-version }} | |
uses: actions/setup-java@v4 | |
with: | |
java-version: ${{ matrix.java-version }} | |
distribution: ${{ matrix.java-distribution }} | |
- name: Set python test settings | |
run: | | |
echo "INSTALL_EXTRAS='[dev,parsl,dask]'" >> $GITHUB_ENV | |
- name: Install uv | |
run: python -m pip install --upgrade uv | |
- name: Install dependencies (Linux) | |
if: matrix.os == 'ubuntu-latest' | |
run: | | |
uv pip install --system --upgrade pip setuptools wheel | |
# mltool installs | |
# c.f. https://github.com/astral-sh/uv/issues/3437 | |
python -m pip install torch torchvision torchaudio --index-url https://download.pytorch.org/whl/cpu | |
uv pip install --system xgboost | |
uv pip install --system 'tritonclient[grpc,http]!=2.41.0' | |
# install checked out coffea | |
uv pip install --system -q '.[dev,parsl,dask,spark]' --upgrade | |
uv pip list --system | |
java -version | |
- name: Install dependencies (MacOS) | |
if: matrix.os == 'macOS-latest' | |
run: | | |
uv pip install --system --upgrade pip setuptools wheel | |
# mltool installs | |
# c.f. https://github.com/astral-sh/uv/issues/3437 | |
python -m pip install torch torchvision torchaudio --index-url https://download.pytorch.org/whl/cpu | |
uv pip install --system xgboost | |
# install checked out coffea | |
uv pip install --system -q '.[dev,dask,spark]' --upgrade | |
uv pip list --system | |
java -version | |
- name: Install dependencies (Windows) | |
if: matrix.os == 'windows-latest' | |
run: | | |
uv pip install --system --upgrade pip setuptools wheel | |
# mltool installs | |
# c.f. https://github.com/astral-sh/uv/issues/3437 | |
python -m pip install torch torchvision torchaudio --index-url https://download.pytorch.org/whl/cpu | |
uv pip install --system xgboost | |
# install checked out coffea | |
uv pip install --system -q '.[dev,dask]' 'numpy<2' --upgrade | |
uv pip list --system | |
java -version | |
- name: Start triton server with example model | |
if: matrix.os == 'ubuntu-latest' | |
run: | | |
docker run -d --rm -p 8000:8000 -p 8001:8001 -p 8002:8002 -v ${{ github.workspace }}/tests/samples/triton_models_test:/models nvcr.io/nvidia/tritonserver:23.04-pyt-python-py3 tritonserver --model-repository=/models | |
- name: Test with pytest | |
run: | | |
python -m pytest --cov-report=xml --cov=coffea --deselect=test_taskvine | |
- name: Upload codecov | |
if: matrix.os == 'ubuntu-latest' && matrix.python-version == 3.12 | |
uses: codecov/codecov-action@v5 | |
- name: Install graphviz | |
if: matrix.os == 'ubuntu-latest' && matrix.python-version == 3.12 | |
uses: ts-graphviz/setup-graphviz@v2 | |
- name: Install pandoc | |
if: matrix.os == 'ubuntu-latest' && matrix.python-version == 3.12 | |
uses: r-lib/actions/setup-pandoc@v2 | |
- name: Build documentation | |
if: matrix.os == 'ubuntu-latest' && matrix.python-version == 3.12 | |
run: | | |
cd docs && make html | |
touch build/html/.nojekyll | |
# - name: Deploy documentation | |
# if: github.event_name == 'push' && matrix.os == 'ubuntu-latest' && matrix.python-version == 3.12 | |
# uses: crazy-max/ghaction-github-pages@v4 | |
# with: | |
# target_branch: gh-pages | |
# build_dir: docs/build/html | |
# env: | |
# GH_PAT: ${{ secrets.GITHUB_OAUTH }} | |
test-vine: | |
runs-on: ubuntu-latest | |
needs: pre-commit | |
strategy: | |
matrix: | |
python-version: ["3.11"] | |
name: test coffea-taskvine | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Conda | |
uses: conda-incubator/setup-miniconda@v3 | |
env: | |
ACTIONS_ALLOW_UNSECURE_COMMANDS: true | |
with: | |
auto-update-conda: true | |
python-version: ${{ matrix.python-version }} | |
channels: conda-forge | |
- name: Construct conda environment | |
shell: bash -l {0} | |
run: | | |
conda create --yes --prefix ./coffea-conda-test-env -c conda-forge python=${{ matrix.python-version }} ndcctools uv | |
conda activate ./coffea-conda-test-env | |
uv pip install --system . | |
uv pip install --system pytest | |
- name: Test with pytest | |
run: | | |
conda run --prefix ./coffea-conda-test-env pytest tests/test_taskvine.py | |
# testskyhookjob: | |
# runs-on: ubuntu-latest | |
# needs: pre-commit | |
# name: test coffea-skyhook-job | |
# | |
# steps: | |
# - uses: actions/checkout@3 | |
# - name: Test Coffea Skyhook Bindings | |
# shell: bash -l {0} | |
# run: | | |
# docker build -t coffea-skyhook-test \ | |
# --file docker/skyhook/Dockerfile \ | |
# . | |
# docker run \ | |
# -v $(pwd):/w \ | |
# -w /w \ | |
# -e IS_CI=true \ | |
# --privileged \ | |
# coffea-skyhook-test \ | |
# ./docker/skyhook/script.sh | |
release: | |
if: github.event_name == 'push' && startsWith(github.ref, 'refs/tags/v') | |
runs-on: ubuntu-latest | |
needs: [test, test-vine] | |
permissions: | |
id-token: write | |
attestations: write | |
contents: read | |
strategy: | |
matrix: | |
python-version: ["3.12"] | |
name: deploy release | |
steps: | |
- uses: actions/checkout@v4 | |
- name: Set up Python ${{ matrix.python-version }} | |
uses: actions/setup-python@v5 | |
with: | |
python-version: ${{ matrix.python-version }} | |
- name: Build package for PyPI | |
run: | | |
pipx run hatch build -t sdist -t wheel | |
- name: Verify the distribution | |
run: pipx run twine check --strict dist/* | |
- name: Generate artifact attestation for sdist and wheel | |
uses: actions/attest-build-provenance@ef244123eb79f2f7a7e75d99086184180e6d0018 # v1.4.4 | |
with: | |
subject-path: "dist/coffea-*" | |
- name: Publish package to PyPI | |
uses: pypa/[email protected] | |
with: | |
user: __token__ | |
password: ${{ secrets.PYPI_TOKEN }} | |
pass: | |
needs: [test, test-vine] | |
runs-on: ubuntu-latest | |
steps: | |
- run: echo "All jobs passed" |