diff --git a/README.md b/README.md index 30d56f0..1a93f9d 100644 --- a/README.md +++ b/README.md @@ -262,6 +262,7 @@ Usage: ./process_data.sh -d -b -r -p -s -c [-age -sex ] ``` +``` MANDATORY ARGUMENTS -d Path to the folder containing DICOM images. Example: ~/sci-balgrist-study/sourcedata/dir_20230711 -b Path to the BIDS folder where the converted NIfTI images will be stored. Example: ~/sci-balgrist-study/bids @@ -273,7 +274,7 @@ MANDATORY ARGUMENTS OPTIONAL ARGUMENTS -a Age of the subject at the time of the MRI scan. The provided value will be stored to participants.tsv file. Example: 25. Default: n/a -x Sex of the subject. The provided value will be stored to participants.tsv file. Example: M. Default: n/a - +``` Example: