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Issue in plotting cell labels by celltype colour for Xenium #398

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OnkarMulay opened this issue Dec 22, 2024 · 0 comments
Open

Issue in plotting cell labels by celltype colour for Xenium #398

OnkarMulay opened this issue Dec 22, 2024 · 0 comments

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@OnkarMulay
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crop0(xenium_sdata).pl.render_labels(outline_alpha=0.4, fill_alpha=0, color="cell_type", 
                                                         contour_px= None, palette=colors, 
                                                         groups=groups).pl.show(coordinate_systems=["global"])

Image

Same command works for CosMx, but doesn't work for Xenium.
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@OnkarMulay