plot_config.yaml

PLOT_NAME: "plot1"
EXTRA_FILE_PLOTTING: True


KEYS:
  alpha: alpha
  hash: hash
  kmer: k-mer
  relaxed-fpr: relaxed-fpr
  none: none
  U: U
  U+R: U+R


TIME:
  FORMAT:
    - determine_query_length_in_seconds
    - query_file_io_in_seconds
    - load_index_in_seconds
    - compute_minimiser_max_in_seconds
    - query_ibf_max_in_seconds
    - generate_results_max_in_seconds
  NAMES:
    SUBKEY_VALUE: "Subkey"
    determine_query_length_in_seconds: "Determine query length"
    determine_query_length_percentage: "Determine query length percentage"
    query_file_io_in_seconds: "Queryfile IO"
    query_file_io_percentage: "Queryfile IO percentage"
    load_index_in_seconds: "Load index"
    load_index_percentage: "Load index percentage"
    compute_minimiser_avg_in_seconds: "Compute minimizer (avg)"
    compute_minimiser_avg_percentage: "Compute minimizer (avg) percentage"
    compute_minimiser_max_in_seconds: "Compute minimizer (max)"
    compute_minimiser_max_percentage: "Compute minimizer (max) percentage"
    query_ibf_avg_in_seconds: "Query IBF (avg)"
    query_ibf_avg_percentage: "Query IBF (avg) percentage"
    query_ibf_max_in_seconds: "Query IBF (max)"
    query_ibf_max_percentage: "Query IBF (max) percentage"
    generate_results_avg_in_seconds: "Generate results (avg)"
    generate_results_avg_percentage: "Generate results (avg) percentage"
    generate_results_max_in_seconds: "Generate results (max)"
    generate_results_max_percentage: "Generate results (max) percentage"


SIZE:
  FORMAT:
    - LEVEL_0_GB_SIZE
    - LEVEL_1_GB_SIZE
    - LEVEL_2_GB_SIZE
    - LEVEL_3_GB_SIZE
  NAMES:
    SUBKEY_VALUE: "Subkey"
    LEVEL_0_GB_SIZE: "Level 0"
    LEVEL_1_GB_SIZE: "Level 1"
    LEVEL_2_GB_SIZE: "Level 2"
    LEVEL_3_GB_SIZE: "Level 3"
    LEVEL_0_AVG_LOAD_FACTOR: "Level 0: Avg load factor"
    LEVEL_1_AVG_LOAD_FACTOR: "Level 1: Avg load factor"
    LEVEL_2_AVG_LOAD_FACTOR: "Level 2: Avg load factor"
    LEVEL_3_AVG_LOAD_FACTOR: "Level 3: Avg load factor"
    GB_TOTAL_SIZE: "Total size"