Merge pull request #225 from sarahet/fasta_formats #220
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| name: Lambda CI on Linux | |
| on: | |
| push: | |
| pull_request: | |
| env: | |
| SHARG_NO_VERSION_CHECK: 1 | |
| TZ: Europe/Berlin | |
| defaults: | |
| run: | |
| shell: bash -ex {0} | |
| jobs: | |
| build: | |
| name: ${{ matrix.name }} | |
| runs-on: ubuntu-22.04 | |
| timeout-minutes: 120 | |
| strategy: | |
| fail-fast: false | |
| matrix: | |
| include: | |
| - name: "gcc12 bifm" | |
| install: "g++-12" | |
| cxx: "g++-12" | |
| cmake_flags: "-DLAMBDA_WITH_BIFM=1" | |
| cc: "gcc-12" | |
| build_type: Release | |
| - name: "gcc13" | |
| install: "g++-13" | |
| cxx: "g++-13" | |
| cc: "gcc-13" | |
| build_type: Release | |
| - name: "gcc12" | |
| install: "g++-12" | |
| cxx: "g++-12" | |
| cc: "gcc-12" | |
| build_type: Release | |
| - name: "gcc11" | |
| install: "g++-11" | |
| cxx: "g++-11" | |
| cc: "gcc-11" | |
| build_type: Release | |
| - name: "clang_format" | |
| install: "g++-11 clang-format-14" | |
| cxx: "g++-11" | |
| cc: "gcc-11" | |
| build_type: Release | |
| steps: | |
| - name: Checkout | |
| uses: actions/checkout@v2 | |
| with: | |
| path: lambda | |
| fetch-depth: 1 | |
| submodules: recursive | |
| - name: Add package source | |
| continue-on-error: true | |
| run: | | |
| echo 'APT::Acquire::Retries "5";' | sudo tee -a /etc/apt/apt.conf.d/80-retries > /dev/null | |
| sudo add-apt-repository --no-update --yes ppa:ubuntu-toolchain-r/ppa | |
| sudo add-apt-repository --no-update --yes ppa:ubuntu-toolchain-r/test | |
| sudo apt-get update | |
| - name: Install CMake | |
| run: sudo apt-get install --yes cmake | |
| - name: Install ccache | |
| run: sudo apt-get install --yes ccache | |
| - name: Install compiler ${{ matrix.install }} | |
| run: sudo apt-get install --yes ${{ matrix.install }} | |
| - name: Load ccache | |
| if: matrix.name != 'clang_format' | |
| uses: actions/cache@v2 | |
| with: | |
| path: .ccache | |
| key: ${{ runner.os }}-${{ matrix.name }}-ccache-${{ github.ref }}-${{ github.run_number }} | |
| # Restoring: From current branch, otherwise from base branch, otherwise from any branch. | |
| restore-keys: | | |
| ${{ runner.os }}-${{ matrix.name }}-ccache-${{ github.ref }} | |
| ${{ runner.os }}-${{ matrix.name }}-ccache-${{ github.base_ref }} | |
| ${{ runner.os }}-${{ matrix.name }}-ccache- | |
| - name: Tool versions | |
| run: | | |
| env cmake --version | |
| env ${{ matrix.cxx }} --version | |
| - name: Configure tests | |
| env: | |
| CXX: ${{ matrix.cxx }} | |
| CC: ${{ matrix.cc }} | |
| run: | | |
| mkdir build | |
| cd build | |
| cmake ../lambda -DLAMBDA_COMPILE_THREADS=2 -DLAMBDA_NATIVE_BUILD=OFF ${{ matrix.cmake_flags }} -DCMAKE_CXX_COMPILER_LAUNCHER=ccache -DCMAKE_C_COMPILER_LAUNCHER=ccache | |
| - name: Build tests | |
| if: matrix.name != 'clang_format' | |
| env: | |
| CCACHE_BASEDIR: ${{ github.workspace }} | |
| CCACHE_DIR: ${{ github.workspace }}/.ccache | |
| CCACHE_COMPRESS: true | |
| CCACHE_COMPRESSLEVEL: 6 | |
| CCACHE_MAXSIZE: 500M | |
| run: | | |
| ccache -p || true | |
| cd build | |
| make -k -j2 cli_test | |
| ccache -s || true | |
| - name: Run tests | |
| if: matrix.name != 'clang_format' | |
| run: | | |
| cd build | |
| ctest . -j2 --output-on-failure | |
| - name: Run Format Check | |
| if: matrix.name == 'clang_format' | |
| run: | | |
| cd build | |
| make check_format |