diff --git a/Crystallography.Native/Eigen/CMakeLists.txt b/Crystallography.Native/Eigen/CMakeLists.txt deleted file mode 100644 index 9eb502b..0000000 --- a/Crystallography.Native/Eigen/CMakeLists.txt +++ /dev/null @@ -1,19 +0,0 @@ -include(RegexUtils) -test_escape_string_as_regex() - -file(GLOB Eigen_directory_files "*") - -escape_string_as_regex(ESCAPED_CMAKE_CURRENT_SOURCE_DIR "${CMAKE_CURRENT_SOURCE_DIR}") - -foreach(f ${Eigen_directory_files}) - if(NOT f MATCHES "\\.txt" AND NOT f MATCHES "${ESCAPED_CMAKE_CURRENT_SOURCE_DIR}/[.].+" AND NOT f MATCHES "${ESCAPED_CMAKE_CURRENT_SOURCE_DIR}/src") - list(APPEND Eigen_directory_files_to_install ${f}) - endif() -endforeach(f ${Eigen_directory_files}) - -install(FILES - ${Eigen_directory_files_to_install} - DESTINATION ${INCLUDE_INSTALL_DIR}/Eigen COMPONENT Devel - ) - -install(DIRECTORY src DESTINATION ${INCLUDE_INSTALL_DIR}/Eigen COMPONENT Devel FILES_MATCHING PATTERN "*.h") diff --git a/Crystallography.Native/Eigen/Cholesky b/Crystallography.Native/Eigen/Cholesky deleted file mode 100644 index 1332b54..0000000 --- a/Crystallography.Native/Eigen/Cholesky +++ /dev/null @@ -1,46 +0,0 @@ -// This file is part of Eigen, a lightweight C++ template library -// for linear algebra. -// -// This Source Code Form is subject to the terms of the Mozilla -// Public License v. 2.0. If a copy of the MPL was not distributed -// with this file, You can obtain one at http://mozilla.org/MPL/2.0/. - -#ifndef EIGEN_CHOLESKY_MODULE_H -#define EIGEN_CHOLESKY_MODULE_H - -#include "Core" -#include "Jacobi" - -#include "src/Core/util/DisableStupidWarnings.h" - -/** \defgroup Cholesky_Module Cholesky module - * - * - * - * This module provides two variants of the Cholesky decomposition for selfadjoint (hermitian) matrices. - * Those decompositions are also accessible via the following methods: - * - MatrixBase::llt() - * - MatrixBase::ldlt() - * - SelfAdjointView::llt() - * - SelfAdjointView::ldlt() - * - * \code - * #include - * \endcode - */ - -#include "src/Cholesky/LLT.h" -#include "src/Cholesky/LDLT.h" -#ifdef EIGEN_USE_LAPACKE -#ifdef EIGEN_USE_MKL -#include "mkl_lapacke.h" -#else -#include "src/misc/lapacke.h" -#endif -#include "src/Cholesky/LLT_LAPACKE.h" -#endif - -#include "src/Core/util/ReenableStupidWarnings.h" - -#endif // EIGEN_CHOLESKY_MODULE_H -/* vim: set filetype=cpp et sw=2 ts=2 ai: */ diff --git a/Crystallography.Native/Eigen/CholmodSupport b/Crystallography.Native/Eigen/CholmodSupport deleted file mode 100644 index bed8924..0000000 --- a/Crystallography.Native/Eigen/CholmodSupport +++ /dev/null @@ -1,48 +0,0 @@ -// This file is part of Eigen, a lightweight C++ template library -// for linear algebra. -// -// This Source Code Form is subject to the terms of the Mozilla -// Public License v. 2.0. If a copy of the MPL was not distributed -// with this file, You can obtain one at http://mozilla.org/MPL/2.0/. - -#ifndef EIGEN_CHOLMODSUPPORT_MODULE_H -#define EIGEN_CHOLMODSUPPORT_MODULE_H - -#include "SparseCore" - -#include "src/Core/util/DisableStupidWarnings.h" - -extern "C" { - #include -} - -/** \ingroup Support_modules - * \defgroup CholmodSupport_Module CholmodSupport module - * - * This module provides an interface to the Cholmod library which is part of the suitesparse package. - * It provides the two following main factorization classes: - * - class CholmodSupernodalLLT: a supernodal LLT Cholesky factorization. - * - class CholmodDecomposiiton: a general L(D)LT Cholesky factorization with automatic or explicit runtime selection of the underlying factorization method (supernodal or simplicial). - * - * For the sake of completeness, this module also propose the two following classes: - * - class CholmodSimplicialLLT - * - class CholmodSimplicialLDLT - * Note that these classes does not bring any particular advantage compared to the built-in - * SimplicialLLT and SimplicialLDLT factorization classes. - * - * \code - * #include - * \endcode - * - * In order to use this module, the cholmod headers must be accessible from the include paths, and your binary must be linked to the cholmod library and its dependencies. - * The dependencies depend on how cholmod has been compiled. - * For a cmake based project, you can use our FindCholmod.cmake module to help you in this task. - * - */ - -#include "src/CholmodSupport/CholmodSupport.h" - -#include "src/Core/util/ReenableStupidWarnings.h" - -#endif // EIGEN_CHOLMODSUPPORT_MODULE_H - diff --git a/Crystallography.Native/Eigen/Core b/Crystallography.Native/Eigen/Core deleted file mode 100644 index ac7c5b3..0000000 --- a/Crystallography.Native/Eigen/Core +++ /dev/null @@ -1,542 +0,0 @@ -// This file is part of Eigen, a lightweight C++ template library -// for linear algebra. -// -// Copyright (C) 2008 Gael Guennebaud -// Copyright (C) 2007-2011 Benoit Jacob -// -// This Source Code Form is subject to the terms of the Mozilla -// Public License v. 2.0. If a copy of the MPL was not distributed -// with this file, You can obtain one at http://mozilla.org/MPL/2.0/. - -#ifndef EIGEN_CORE_H -#define EIGEN_CORE_H - -// first thing Eigen does: stop the compiler from committing suicide -#include "src/Core/util/DisableStupidWarnings.h" - -#if defined(__CUDACC__) && !defined(EIGEN_NO_CUDA) - #define EIGEN_CUDACC __CUDACC__ -#endif - -#if defined(__CUDA_ARCH__) && !defined(EIGEN_NO_CUDA) - #define EIGEN_CUDA_ARCH __CUDA_ARCH__ -#endif - -#if defined(__CUDACC_VER_MAJOR__) && (__CUDACC_VER_MAJOR__ >= 9) -#define EIGEN_CUDACC_VER ((__CUDACC_VER_MAJOR__ * 10000) + (__CUDACC_VER_MINOR__ * 100)) -#elif defined(__CUDACC_VER__) -#define EIGEN_CUDACC_VER __CUDACC_VER__ -#else -#define EIGEN_CUDACC_VER 0 -#endif - -// Handle NVCC/CUDA/SYCL -#if defined(__CUDACC__) || defined(__SYCL_DEVICE_ONLY__) - // Do not try asserts on CUDA and SYCL! - #ifndef EIGEN_NO_DEBUG - #define EIGEN_NO_DEBUG - #endif - - #ifdef EIGEN_INTERNAL_DEBUGGING - #undef EIGEN_INTERNAL_DEBUGGING - #endif - - #ifdef EIGEN_EXCEPTIONS - #undef EIGEN_EXCEPTIONS - #endif - - // All functions callable from CUDA code must be qualified with __device__ - #ifdef __CUDACC__ - // Do not try to vectorize on CUDA and SYCL! - #ifndef EIGEN_DONT_VECTORIZE - #define EIGEN_DONT_VECTORIZE - #endif - - #define EIGEN_DEVICE_FUNC __host__ __device__ - // We need cuda_runtime.h to ensure that that EIGEN_USING_STD_MATH macro - // works properly on the device side - #include - #else - #define EIGEN_DEVICE_FUNC - #endif - -#else - #define EIGEN_DEVICE_FUNC - -#endif - -// When compiling CUDA device code with NVCC, pull in math functions from the -// global namespace. In host mode, and when device doee with clang, use the -// std versions. -#if defined(__CUDA_ARCH__) && defined(__NVCC__) - #define EIGEN_USING_STD_MATH(FUNC) using ::FUNC; -#else - #define EIGEN_USING_STD_MATH(FUNC) using std::FUNC; -#endif - -#if (defined(_CPPUNWIND) || defined(__EXCEPTIONS)) && !defined(__CUDA_ARCH__) && !defined(EIGEN_EXCEPTIONS) && !defined(EIGEN_USE_SYCL) - #define EIGEN_EXCEPTIONS -#endif - -#ifdef EIGEN_EXCEPTIONS - #include -#endif - -// then include this file where all our macros are defined. It's really important to do it first because -// it's where we do all the alignment settings (platform detection and honoring the user's will if he -// defined e.g. EIGEN_DONT_ALIGN) so it needs to be done before we do anything with vectorization. -#include "src/Core/util/Macros.h" - -// Disable the ipa-cp-clone optimization flag with MinGW 6.x or newer (enabled by default with -O3) -// See http://eigen.tuxfamily.org/bz/show_bug.cgi?id=556 for details. -#if EIGEN_COMP_MINGW && EIGEN_GNUC_AT_LEAST(4,6) - #pragma GCC optimize ("-fno-ipa-cp-clone") -#endif - -#include - -// this include file manages BLAS and MKL related macros -// and inclusion of their respective header files -#include "src/Core/util/MKL_support.h" - -// if alignment is disabled, then disable vectorization. Note: EIGEN_MAX_ALIGN_BYTES is the proper check, it takes into -// account both the user's will (EIGEN_MAX_ALIGN_BYTES,EIGEN_DONT_ALIGN) and our own platform checks -#if EIGEN_MAX_ALIGN_BYTES==0 - #ifndef EIGEN_DONT_VECTORIZE - #define EIGEN_DONT_VECTORIZE - #endif -#endif - -#if EIGEN_COMP_MSVC - #include // for _aligned_malloc -- need it regardless of whether vectorization is enabled - #if (EIGEN_COMP_MSVC >= 1500) // 2008 or later - // Remember that usage of defined() in a #define is undefined by the standard. - // a user reported that in 64-bit mode, MSVC doesn't care to define _M_IX86_FP. - #if (defined(_M_IX86_FP) && (_M_IX86_FP >= 2)) || EIGEN_ARCH_x86_64 - #define EIGEN_SSE2_ON_MSVC_2008_OR_LATER - #endif - #endif -#else - // Remember that usage of defined() in a #define is undefined by the standard - #if (defined __SSE2__) && ( (!EIGEN_COMP_GNUC) || EIGEN_COMP_ICC || EIGEN_GNUC_AT_LEAST(4,2) ) - #define EIGEN_SSE2_ON_NON_MSVC_BUT_NOT_OLD_GCC - #endif -#endif - -#ifndef EIGEN_DONT_VECTORIZE - - #if defined (EIGEN_SSE2_ON_NON_MSVC_BUT_NOT_OLD_GCC) || defined(EIGEN_SSE2_ON_MSVC_2008_OR_LATER) - - // Defines symbols for compile-time detection of which instructions are - // used. - // EIGEN_VECTORIZE_YY is defined if and only if the instruction set YY is used - #define EIGEN_VECTORIZE - #define EIGEN_VECTORIZE_SSE - #define EIGEN_VECTORIZE_SSE2 - - // Detect sse3/ssse3/sse4: - // gcc and icc defines __SSE3__, ... - // there is no way to know about this on msvc. You can define EIGEN_VECTORIZE_SSE* if you - // want to force the use of those instructions with msvc. - #ifdef __SSE3__ - #define EIGEN_VECTORIZE_SSE3 - #endif - #ifdef __SSSE3__ - #define EIGEN_VECTORIZE_SSSE3 - #endif - #ifdef __SSE4_1__ - #define EIGEN_VECTORIZE_SSE4_1 - #endif - #ifdef __SSE4_2__ - #define EIGEN_VECTORIZE_SSE4_2 - #endif - #ifdef __AVX__ - #define EIGEN_VECTORIZE_AVX - #define EIGEN_VECTORIZE_SSE3 - #define EIGEN_VECTORIZE_SSSE3 - #define EIGEN_VECTORIZE_SSE4_1 - #define EIGEN_VECTORIZE_SSE4_2 - #endif - #ifdef __AVX2__ - #define EIGEN_VECTORIZE_AVX2 - #endif - #ifdef __FMA__ - #define EIGEN_VECTORIZE_FMA - #endif - #if defined(__AVX512F__) && defined(EIGEN_ENABLE_AVX512) - #define EIGEN_VECTORIZE_AVX512 - #define EIGEN_VECTORIZE_AVX2 - #define EIGEN_VECTORIZE_AVX - #define EIGEN_VECTORIZE_FMA - #ifdef __AVX512DQ__ - #define EIGEN_VECTORIZE_AVX512DQ - #endif - #ifdef __AVX512ER__ - #define EIGEN_VECTORIZE_AVX512ER - #endif - #endif - - // include files - - // This extern "C" works around a MINGW-w64 compilation issue - // https://sourceforge.net/tracker/index.php?func=detail&aid=3018394&group_id=202880&atid=983354 - // In essence, intrin.h is included by windows.h and also declares intrinsics (just as emmintrin.h etc. below do). - // However, intrin.h uses an extern "C" declaration, and g++ thus complains of duplicate declarations - // with conflicting linkage. The linkage for intrinsics doesn't matter, but at that stage the compiler doesn't know; - // so, to avoid compile errors when windows.h is included after Eigen/Core, ensure intrinsics are extern "C" here too. - // notice that since these are C headers, the extern "C" is theoretically needed anyways. - extern "C" { - // In theory we should only include immintrin.h and not the other *mmintrin.h header files directly. - // Doing so triggers some issues with ICC. However old gcc versions seems to not have this file, thus: - #if EIGEN_COMP_ICC >= 1110 - #include - #else - #include - #include - #include - #ifdef EIGEN_VECTORIZE_SSE3 - #include - #endif - #ifdef EIGEN_VECTORIZE_SSSE3 - #include - #endif - #ifdef EIGEN_VECTORIZE_SSE4_1 - #include - #endif - #ifdef EIGEN_VECTORIZE_SSE4_2 - #include - #endif - #if defined(EIGEN_VECTORIZE_AVX) || defined(EIGEN_VECTORIZE_AVX512) - #include - #endif - #endif - } // end extern "C" - #elif defined __VSX__ - #define EIGEN_VECTORIZE - #define EIGEN_VECTORIZE_VSX - #include - // We need to #undef all these ugly tokens defined in - // => use __vector instead of vector - #undef bool - #undef vector - #undef pixel - #elif defined __ALTIVEC__ - #define EIGEN_VECTORIZE - #define EIGEN_VECTORIZE_ALTIVEC - #include - // We need to #undef all these ugly tokens defined in - // => use __vector instead of vector - #undef bool - #undef vector - #undef pixel - #elif (defined __ARM_NEON) || (defined __ARM_NEON__) - #define EIGEN_VECTORIZE - #define EIGEN_VECTORIZE_NEON - #include - #elif (defined __s390x__ && defined __VEC__) - #define EIGEN_VECTORIZE - #define EIGEN_VECTORIZE_ZVECTOR - #include - #endif -#endif - -#if defined(__F16C__) && !defined(EIGEN_COMP_CLANG) - // We can use the optimized fp16 to float and float to fp16 conversion routines - #define EIGEN_HAS_FP16_C -#endif - -#if defined __CUDACC__ - #define EIGEN_VECTORIZE_CUDA - #include - #if EIGEN_CUDACC_VER >= 70500 - #define EIGEN_HAS_CUDA_FP16 - #endif -#endif - -#if defined EIGEN_HAS_CUDA_FP16 - #include - #include -#endif - -#if (defined _OPENMP) && (!defined EIGEN_DONT_PARALLELIZE) - #define EIGEN_HAS_OPENMP -#endif - -#ifdef EIGEN_HAS_OPENMP -#include -#endif - -// MSVC for windows mobile does not have the errno.h file -#if !(EIGEN_COMP_MSVC && EIGEN_OS_WINCE) && !EIGEN_COMP_ARM -#define EIGEN_HAS_ERRNO -#endif - -#ifdef EIGEN_HAS_ERRNO -#include -#endif -#include -#include -#include -#include -#include -#include -#ifndef EIGEN_NO_IO - #include -#endif -#include -#include -#include -#include // for CHAR_BIT -// for min/max: -#include - -// for std::is_nothrow_move_assignable -#ifdef EIGEN_INCLUDE_TYPE_TRAITS -#include -#endif - -// for outputting debug info -#ifdef EIGEN_DEBUG_ASSIGN -#include -#endif - -// required for __cpuid, needs to be included after cmath -#if EIGEN_COMP_MSVC && EIGEN_ARCH_i386_OR_x86_64 && !EIGEN_OS_WINCE - #include -#endif - -/** \brief Namespace containing all symbols from the %Eigen library. */ -namespace Eigen { - -inline static const char *SimdInstructionSetsInUse(void) { -#if defined(EIGEN_VECTORIZE_AVX512) - return "AVX512, FMA, AVX2, AVX, SSE, SSE2, SSE3, SSSE3, SSE4.1, SSE4.2"; -#elif defined(EIGEN_VECTORIZE_AVX) - return "AVX SSE, SSE2, SSE3, SSSE3, SSE4.1, SSE4.2"; -#elif defined(EIGEN_VECTORIZE_SSE4_2) - return "SSE, SSE2, SSE3, SSSE3, SSE4.1, SSE4.2"; -#elif defined(EIGEN_VECTORIZE_SSE4_1) - return "SSE, SSE2, SSE3, SSSE3, SSE4.1"; -#elif defined(EIGEN_VECTORIZE_SSSE3) - return "SSE, SSE2, SSE3, SSSE3"; -#elif defined(EIGEN_VECTORIZE_SSE3) - return "SSE, SSE2, SSE3"; -#elif defined(EIGEN_VECTORIZE_SSE2) - return "SSE, SSE2"; -#elif defined(EIGEN_VECTORIZE_ALTIVEC) - return "AltiVec"; -#elif defined(EIGEN_VECTORIZE_VSX) - return "VSX"; -#elif defined(EIGEN_VECTORIZE_NEON) - return "ARM NEON"; -#elif defined(EIGEN_VECTORIZE_ZVECTOR) - return "S390X ZVECTOR"; -#else - return "None"; -#endif -} - -} // end namespace Eigen - -#if defined EIGEN2_SUPPORT_STAGE40_FULL_EIGEN3_STRICTNESS || defined EIGEN2_SUPPORT_STAGE30_FULL_EIGEN3_API || defined EIGEN2_SUPPORT_STAGE20_RESOLVE_API_CONFLICTS || defined EIGEN2_SUPPORT_STAGE10_FULL_EIGEN2_API || defined EIGEN2_SUPPORT -// This will generate an error message: -#error Eigen2-support is only available up to version 3.2. Please go to "http://eigen.tuxfamily.org/index.php?title=Eigen2" for further information -#endif - -namespace Eigen { - -// we use size_t frequently and we'll never remember to prepend it with std:: everytime just to -// ensure QNX/QCC support -using std::size_t; -// gcc 4.6.0 wants std:: for ptrdiff_t -using std::ptrdiff_t; - -} - -/** \defgroup Core_Module Core module - * This is the main module of Eigen providing dense matrix and vector support - * (both fixed and dynamic size) with all the features corresponding to a BLAS library - * and much more... - * - * \code - * #include - * \endcode - */ - -#include "src/Core/util/Constants.h" -#include "src/Core/util/Meta.h" -#include "src/Core/util/ForwardDeclarations.h" -#include "src/Core/util/StaticAssert.h" -#include "src/Core/util/XprHelper.h" -#include "src/Core/util/Memory.h" - -#include "src/Core/NumTraits.h" -#include "src/Core/MathFunctions.h" -#include "src/Core/GenericPacketMath.h" -#include "src/Core/MathFunctionsImpl.h" -#include "src/Core/arch/Default/ConjHelper.h" - -#if defined EIGEN_VECTORIZE_AVX512 - #include "src/Core/arch/SSE/PacketMath.h" - #include "src/Core/arch/SSE/MathFunctions.h" - #include "src/Core/arch/AVX/PacketMath.h" - #include "src/Core/arch/AVX/MathFunctions.h" - #include "src/Core/arch/AVX512/PacketMath.h" - #include "src/Core/arch/AVX512/MathFunctions.h" -#elif defined EIGEN_VECTORIZE_AVX - // Use AVX for floats and doubles, SSE for integers - #include "src/Core/arch/SSE/PacketMath.h" - #include "src/Core/arch/SSE/Complex.h" - #include "src/Core/arch/SSE/MathFunctions.h" - #include "src/Core/arch/AVX/PacketMath.h" - #include "src/Core/arch/AVX/MathFunctions.h" - #include "src/Core/arch/AVX/Complex.h" - #include "src/Core/arch/AVX/TypeCasting.h" - #include "src/Core/arch/SSE/TypeCasting.h" -#elif defined EIGEN_VECTORIZE_SSE - #include "src/Core/arch/SSE/PacketMath.h" - #include "src/Core/arch/SSE/MathFunctions.h" - #include "src/Core/arch/SSE/Complex.h" - #include "src/Core/arch/SSE/TypeCasting.h" -#elif defined(EIGEN_VECTORIZE_ALTIVEC) || defined(EIGEN_VECTORIZE_VSX) - #include "src/Core/arch/AltiVec/PacketMath.h" - #include "src/Core/arch/AltiVec/MathFunctions.h" - #include "src/Core/arch/AltiVec/Complex.h" -#elif defined EIGEN_VECTORIZE_NEON - #include "src/Core/arch/NEON/PacketMath.h" - #include "src/Core/arch/NEON/MathFunctions.h" - #include "src/Core/arch/NEON/Complex.h" -#elif defined EIGEN_VECTORIZE_ZVECTOR - #include "src/Core/arch/ZVector/PacketMath.h" - #include "src/Core/arch/ZVector/MathFunctions.h" - #include "src/Core/arch/ZVector/Complex.h" -#endif - -// Half float support -#include "src/Core/arch/CUDA/Half.h" -#include "src/Core/arch/CUDA/PacketMathHalf.h" -#include "src/Core/arch/CUDA/TypeCasting.h" - -#if defined EIGEN_VECTORIZE_CUDA - #include "src/Core/arch/CUDA/PacketMath.h" - #include "src/Core/arch/CUDA/MathFunctions.h" -#endif - -#include "src/Core/arch/Default/Settings.h" - -#include "src/Core/functors/TernaryFunctors.h" -#include "src/Core/functors/BinaryFunctors.h" -#include "src/Core/functors/UnaryFunctors.h" -#include "src/Core/functors/NullaryFunctors.h" -#include "src/Core/functors/StlFunctors.h" -#include "src/Core/functors/AssignmentFunctors.h" - -// Specialized functors to enable the processing of complex numbers -// on CUDA devices -#include "src/Core/arch/CUDA/Complex.h" - -#include "src/Core/IO.h" -#include "src/Core/DenseCoeffsBase.h" -#include "src/Core/DenseBase.h" -#include "src/Core/MatrixBase.h" -#include "src/Core/EigenBase.h" - -#include "src/Core/Product.h" -#include "src/Core/CoreEvaluators.h" -#include "src/Core/AssignEvaluator.h" - -#ifndef EIGEN_PARSED_BY_DOXYGEN // work around Doxygen bug triggered by Assign.h r814874 - // at least confirmed with Doxygen 1.5.5 and 1.5.6 - #include "src/Core/Assign.h" -#endif - -#include "src/Core/ArrayBase.h" -#include "src/Core/util/BlasUtil.h" -#include "src/Core/DenseStorage.h" -#include "src/Core/NestByValue.h" - -// #include "src/Core/ForceAlignedAccess.h" - -#include "src/Core/ReturnByValue.h" -#include "src/Core/NoAlias.h" -#include "src/Core/PlainObjectBase.h" -#include "src/Core/Matrix.h" -#include "src/Core/Array.h" -#include "src/Core/CwiseTernaryOp.h" -#include "src/Core/CwiseBinaryOp.h" -#include "src/Core/CwiseUnaryOp.h" -#include "src/Core/CwiseNullaryOp.h" -#include "src/Core/CwiseUnaryView.h" -#include "src/Core/SelfCwiseBinaryOp.h" -#include "src/Core/Dot.h" -#include "src/Core/StableNorm.h" -#include "src/Core/Stride.h" -#include "src/Core/MapBase.h" -#include "src/Core/Map.h" -#include "src/Core/Ref.h" -#include "src/Core/Block.h" -#include "src/Core/VectorBlock.h" -#include "src/Core/Transpose.h" -#include "src/Core/DiagonalMatrix.h" -#include "src/Core/Diagonal.h" -#include "src/Core/DiagonalProduct.h" -#include "src/Core/Redux.h" -#include "src/Core/Visitor.h" -#include "src/Core/Fuzzy.h" -#include "src/Core/Swap.h" -#include "src/Core/CommaInitializer.h" -#include "src/Core/GeneralProduct.h" -#include "src/Core/Solve.h" -#include "src/Core/Inverse.h" -#include "src/Core/SolverBase.h" -#include "src/Core/PermutationMatrix.h" -#include "src/Core/Transpositions.h" -#include "src/Core/TriangularMatrix.h" -#include "src/Core/SelfAdjointView.h" -#include "src/Core/products/GeneralBlockPanelKernel.h" -#include "src/Core/products/Parallelizer.h" -#include "src/Core/ProductEvaluators.h" -#include "src/Core/products/GeneralMatrixVector.h" -#include "src/Core/products/GeneralMatrixMatrix.h" -#include "src/Core/SolveTriangular.h" -#include "src/Core/products/GeneralMatrixMatrixTriangular.h" -#include "src/Core/products/SelfadjointMatrixVector.h" -#include "src/Core/products/SelfadjointMatrixMatrix.h" -#include "src/Core/products/SelfadjointProduct.h" -#include "src/Core/products/SelfadjointRank2Update.h" -#include "src/Core/products/TriangularMatrixVector.h" -#include "src/Core/products/TriangularMatrixMatrix.h" -#include "src/Core/products/TriangularSolverMatrix.h" -#include "src/Core/products/TriangularSolverVector.h" -#include "src/Core/BandMatrix.h" -#include "src/Core/CoreIterators.h" -#include "src/Core/ConditionEstimator.h" - -#include "src/Core/BooleanRedux.h" -#include "src/Core/Select.h" -#include "src/Core/VectorwiseOp.h" -#include "src/Core/Random.h" -#include "src/Core/Replicate.h" -#include "src/Core/Reverse.h" -#include "src/Core/ArrayWrapper.h" - -#ifdef EIGEN_USE_BLAS -#include "src/Core/products/GeneralMatrixMatrix_BLAS.h" -#include "src/Core/products/GeneralMatrixVector_BLAS.h" -#include "src/Core/products/GeneralMatrixMatrixTriangular_BLAS.h" -#include "src/Core/products/SelfadjointMatrixMatrix_BLAS.h" -#include "src/Core/products/SelfadjointMatrixVector_BLAS.h" -#include "src/Core/products/TriangularMatrixMatrix_BLAS.h" -#include "src/Core/products/TriangularMatrixVector_BLAS.h" -#include "src/Core/products/TriangularSolverMatrix_BLAS.h" -#endif // EIGEN_USE_BLAS - -#ifdef EIGEN_USE_MKL_VML -#include "src/Core/Assign_MKL.h" -#endif - -#include "src/Core/GlobalFunctions.h" - -#include "src/Core/util/ReenableStupidWarnings.h" - -#endif // EIGEN_CORE_H diff --git a/Crystallography.Native/Eigen/Dense b/Crystallography.Native/Eigen/Dense deleted file mode 100644 index 5768910..0000000 --- a/Crystallography.Native/Eigen/Dense +++ /dev/null @@ -1,7 +0,0 @@ -#include "Core" -#include "LU" -#include "Cholesky" -#include "QR" -#include "SVD" -#include "Geometry" -#include "Eigenvalues" diff --git a/Crystallography.Native/Eigen/Eigen b/Crystallography.Native/Eigen/Eigen deleted file mode 100644 index 654c8dc..0000000 --- a/Crystallography.Native/Eigen/Eigen +++ /dev/null @@ -1,2 +0,0 @@ -#include "Dense" -#include "Sparse" diff --git a/Crystallography.Native/Eigen/Eigenvalues b/Crystallography.Native/Eigen/Eigenvalues deleted file mode 100644 index 7d6ac78..0000000 --- a/Crystallography.Native/Eigen/Eigenvalues +++ /dev/null @@ -1,61 +0,0 @@ -// This file is part of Eigen, a lightweight C++ template library -// for linear algebra. -// -// This Source Code Form is subject to the terms of the Mozilla -// Public License v. 2.0. If a copy of the MPL was not distributed -// with this file, You can obtain one at http://mozilla.org/MPL/2.0/. - -#ifndef EIGEN_EIGENVALUES_MODULE_H -#define EIGEN_EIGENVALUES_MODULE_H - -#include "Core" - -#include "Cholesky" -#include "Jacobi" -#include "Householder" -#include "LU" -#include "Geometry" - -#include "src/Core/util/DisableStupidWarnings.h" - -/** \defgroup Eigenvalues_Module Eigenvalues module - * - * - * - * This module mainly provides various eigenvalue solvers. - * This module also provides some MatrixBase methods, including: - * - MatrixBase::eigenvalues(), - * - MatrixBase::operatorNorm() - * - * \code - * #include - * \endcode - */ - -#include "src/misc/RealSvd2x2.h" -#include "src/Eigenvalues/Tridiagonalization.h" -#include "src/Eigenvalues/RealSchur.h" -#include "src/Eigenvalues/EigenSolver.h" -#include "src/Eigenvalues/SelfAdjointEigenSolver.h" -#include "src/Eigenvalues/GeneralizedSelfAdjointEigenSolver.h" -#include "src/Eigenvalues/HessenbergDecomposition.h" -#include "src/Eigenvalues/ComplexSchur.h" -#include "src/Eigenvalues/ComplexEigenSolver.h" -#include "src/Eigenvalues/RealQZ.h" -#include "src/Eigenvalues/GeneralizedEigenSolver.h" -#include "src/Eigenvalues/MatrixBaseEigenvalues.h" -#ifdef EIGEN_USE_LAPACKE -#ifdef EIGEN_USE_MKL -#include "mkl_lapacke.h" -#else -#include "src/misc/lapacke.h" -#endif -#include "src/Eigenvalues/RealSchur_LAPACKE.h" -#include "src/Eigenvalues/ComplexSchur_LAPACKE.h" -#include "src/Eigenvalues/SelfAdjointEigenSolver_LAPACKE.h" -#endif - -#include "src/Core/util/ReenableStupidWarnings.h" - -#endif // EIGEN_EIGENVALUES_MODULE_H -/* vim: set filetype=cpp et sw=2 ts=2 ai: */ diff --git a/Crystallography.Native/Eigen/UmfPackSupport b/Crystallography.Native/Eigen/UmfPackSupport deleted file mode 100644 index 00eec80..0000000 --- a/Crystallography.Native/Eigen/UmfPackSupport +++ /dev/null @@ -1,40 +0,0 @@ -// This file is part of Eigen, a lightweight C++ template library -// for linear algebra. -// -// This Source Code Form is subject to the terms of the Mozilla -// Public License v. 2.0. If a copy of the MPL was not distributed -// with this file, You can obtain one at http://mozilla.org/MPL/2.0/. - -#ifndef EIGEN_UMFPACKSUPPORT_MODULE_H -#define EIGEN_UMFPACKSUPPORT_MODULE_H - -#include "SparseCore" - -#include "src/Core/util/DisableStupidWarnings.h" - -extern "C" { -#include -} - -/** \ingroup Support_modules - * \defgroup UmfPackSupport_Module UmfPackSupport module - * - * This module provides an interface to the UmfPack library which is part of the suitesparse package. - * It provides the following factorization class: - * - class UmfPackLU: a multifrontal sequential LU factorization. - * - * \code - * #include - * \endcode - * - * In order to use this module, the umfpack headers must be accessible from the include paths, and your binary must be linked to the umfpack library and its dependencies. - * The dependencies depend on how umfpack has been compiled. - * For a cmake based project, you can use our FindUmfPack.cmake module to help you in this task. - * - */ - -#include "src/UmfPackSupport/UmfPackSupport.h" - -#include "src/Core/util/ReenableStupidWarnings.h" - -#endif // EIGEN_UMFPACKSUPPORT_MODULE_H