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Failed to run example #1

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HGDD0 opened this issue Jun 7, 2022 · 0 comments
Open

Failed to run example #1

HGDD0 opened this issue Jun 7, 2022 · 0 comments

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@HGDD0
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HGDD0 commented Jun 7, 2022

I followed the manual, installed BOOST and GUROBI, and cloned GREDU.
But it came out error when running ./build.sh in /src.
As I only want to try segdcj, to finish the compilation:
1. I replace the file in /segdic/src as the same in rename exchange to avoid conflict
2. And add #include in /segdic/src/lpsolver.cc
3. change Makefile line 297,

"segdcj_LDADD= = -lgurobi_c++ -lgurobi"

change to

  • segdcj_LDADD= = -lgurobi_c++ -lgurobi95

So the compilation is completed, but when run

  •     ./segdcj human.all mouse.all 20
    

it throws an error:

 load genomes ...
 alphabet size = 11235
 run lpsolver ...
 Segmentation fault (core dumped)

I use BOOST 1.60.0 and GUROBI 951

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