New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

Sign up for GitHub

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Jump to bottom

More efficient ontology loading #2

Open

shbrief opened this issue Oct 26, 2023 · 0 comments

Owner

shbrief commented Oct 26, 2023

OmicsMLRepoR/R/getOntoDesc.R

Line 24 in 4c56695

    
           res <- ontoBrowse(term, ontoDB = ontoDB) #<<<<<<<<< Can we load ontology only once if multiple terms are from a same ontology?

Currently, ontology is loaded every time a term is looked up even though multiple terms are from the same ontology, making this function very slow.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment