Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

Cleanup SAMSEG segmentation #5

Closed
jcohenadad opened this issue Oct 14, 2024 · 1 comment
Closed

Cleanup SAMSEG segmentation #5

jcohenadad opened this issue Oct 14, 2024 · 1 comment

Comments

@jcohenadad
Copy link
Member

SAMSEG segmentation has the following useful classes:

  • 258: body
  • 165: skull
  • 259: eye

We need to create a separate file for each of them, to be able to pre-process some of these labels, eg: smooth the skull one, as it is very noisy, see orange label below:
image

Motivation for the body class

Even though the body class that @CharlesPageot did already includes the head (see #4 (comment)), the SAMSEG head body is of better quality. See below comparison between the two body labels, with the one from Charles missing part of the head:

ezgif-1-95d1200de5

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

2 participants