AttributeError: module 'cellranger.stats' has no attribute 'correct_bc_error'

[LilyLuyang]

Hi authors,

Thanks for your developed tool so that other users can reproduce this analysis pipeline. I encountered an issue when running "step5 Cell Barcode and UMI correction", and the error as follows:
AttributeError: module 'cellranger.stats' has no attribute 'correct_bc_error'.

I tried to deal with this bug through searching the 'correct_bc_error' attribute of cellranger stats module from official website, and also check the codes in cellBC_UMI_corrector.py you provided, but I coundn't solve it. Could please provide some thoughts about how to resolve it? Thanks a lot.

Lily

[LilyLuyang]

Sorry for the stupid question. BTW, could you please provide the output file "flnc.cellBC_UMI_correction.xls" so that I'm able to understand every procedure.
Thanks for your generous help!

[LilyLuyang]

I have addressed this issue by using lower cellranger version (cellranger/3.0.2 is only available in our supercomputer) rather than cellranger/6.1.1 (the higher version in the supercomputer) here, so the attribute could be found well.