.dockstore.yml

version: 1.2
workflows:
  - name: Optimus
    subclass: WDL
    primaryDescriptorPath: /pipelines/skylab/optimus/Optimus.wdl
  - name: Smartseq2_Multisample
    subclass: WDL
    primaryDescriptorPath: /pipelines/skylab/smartseq2_multisample/MultiSampleSmartSeq2.wdl
  - name: Smartseq2_Single_Sample
    subclass: WDL
    primaryDescriptorPath: /pipelines/skylab/smartseq2_single_sample/SmartSeq2SingleSample.wdl
  - name: IlluminaGenotypingArray
    subclass: WDL
    primaryDescriptorPath: /pipelines/broad/genotyping/illumina/IlluminaGenotypingArray.wdl
  - name: scATAC
    subclass: WDL
    primaryDescriptorPath: /pipelines/skylab/scATAC/scATAC.wdl
  - name: JointGenotyping
    subclass: WDL
    primaryDescriptorPath: /pipelines/broad/dna_seq/germline/joint_genotyping/JointGenotyping.wdl
  - name: ExomeGermlineSingleSample
    subclass: WDL
    primaryDescriptorPath: /pipelines/broad/dna_seq/germline/single_sample/exome/ExomeGermlineSingleSample.wdl
  - name: WholeGenomeGermlineSingleSample
    subclass: WDL
    primaryDescriptorPath: /pipelines/broad/dna_seq/germline/single_sample/wgs/WholeGenomeGermlineSingleSample.wdl
  - name: OptimusPostProcessing
    subclass: WDL
    primaryDescriptorPath: /projects/hca_mvp/OptimusPostProcessing.wdl
  - name: CEMBA
    subclass: WDL
    primaryDescriptorPath: /pipelines/cemba/cemba_methylcseq/CEMBA.wdl